RNA–Protein interactions for RNA: ENST00000630422.2

CCNA1-204, Transcript of cyclin A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCNA1, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-204ENST00000630422 NKTRP30414 1462 aaKnown RBP22.46■■□□□ 1.19
CCNA1-204ENST00000630422 MYO5BQ9ULV0 1848 aa22.46■■□□□ 1.19
CCNA1-204ENST00000630422 POTEAQ6S8J7 498 aa22.44■■□□□ 1.18
CCNA1-204ENST00000630422 FAM50AQ14320 339 aaKnown RBP22.43■■□□□ 1.18
CCNA1-204ENST00000630422 MSH6P52701 1360 aa22.42■■□□□ 1.18
CCNA1-204ENST00000630422 GCC2Q8IWJ2 1684 aa22.42■■□□□ 1.18
CCNA1-204ENST00000630422 RPRD2Q5VT52 1461 aaKnown RBP22.41■■□□□ 1.18
CCNA1-204ENST00000630422 ZFYVE9O95405 1425 aa22.41■■□□□ 1.18
CCNA1-204ENST00000630422 ANKRD50Q9ULJ7 1429 aa22.41■■□□□ 1.18
CCNA1-204ENST00000630422 CHD2O14647 1828 aaKnown RBP22.41■■□□□ 1.18
CCNA1-204ENST00000630422 PHLPP1O60346 1717 aa22.39■■□□□ 1.18
CCNA1-204ENST00000630422 SLAIN2Q9P270 581 aa22.39■■□□□ 1.17
CCNA1-204ENST00000630422 PLEKHG1Q9ULL1 1385 aa22.39■■□□□ 1.17
CCNA1-204ENST00000630422 RIMS2Q9UQ26 1411 aa22.39■■□□□ 1.17
CCNA1-204ENST00000630422 PPP1R15AO75807 674 aaPredicted RBP22.38■■□□□ 1.17
CCNA1-204ENST00000630422 TMEM131LA2VDJ0 1609 aa22.37■■□□□ 1.17
CCNA1-204ENST00000630422 HDGFP51858 240 aaKnown RBP22.34■■□□□ 1.17
CCNA1-204ENST00000630422 CHGAP10645 457 aaKnown RBP22.33■■□□□ 1.17
CCNA1-204ENST00000630422 JCADQ9P266 1359 aa22.32■■□□□ 1.16
CCNA1-204ENST00000630422 NUTM2DQ5VT03 806 aaPredicted RBP22.32■■□□□ 1.16
CCNA1-204ENST00000630422 UNC13BO14795 1591 aa22.32■■□□□ 1.16
CCNA1-204ENST00000630422 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
CCNA1-204ENST00000630422 E9PCH4 1651 aa22.3■■□□□ 1.16
CCNA1-204ENST00000630422 SETD1AO15047 1707 aaKnown RBP22.3■■□□□ 1.16
CCNA1-204ENST00000630422 COL16A1Q07092 1604 aaPredicted RBP22.3■■□□□ 1.16
CCNA1-204ENST00000630422 C14orf37Q86TY3 774 aa22.29■■□□□ 1.16
CCNA1-204ENST00000630422 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.29■■□□□ 1.16
CCNA1-204ENST00000630422 ADAMTS13Q76LX8 1427 aa22.28■■□□□ 1.16
CCNA1-204ENST00000630422 NCOA3Q9Y6Q9 1424 aa22.26■■□□□ 1.15
CCNA1-204ENST00000630422 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.26■■□□□ 1.15
CCNA1-204ENST00000630422 DIP2AQ14689 1571 aa22.24■■□□□ 1.15
CCNA1-204ENST00000630422 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
CCNA1-204ENST00000630422 LRP6O75581 1613 aa22.23■■□□□ 1.15
CCNA1-204ENST00000630422 CADPS2Q86UW7 1296 aa22.22■■□□□ 1.15
CCNA1-204ENST00000630422 C19orf44Q9H6X5 657 aa22.22■■□□□ 1.15
CCNA1-204ENST00000630422 ATF3P18847 181 aa22.21■■□□□ 1.15
CCNA1-204ENST00000630422 PIK3R4Q99570 1358 aa22.21■■□□□ 1.15
CCNA1-204ENST00000630422 SPATA31A6Q5VVP1 1343 aa22.2■■□□□ 1.14
CCNA1-204ENST00000630422 AHDC1Q5TGY3 1603 aaPredicted RBP22.2■■□□□ 1.14
CCNA1-204ENST00000630422 MEX3CQ5U5Q3 659 aaKnown RBP22.2■■□□□ 1.14
CCNA1-204ENST00000630422 ROCK1Q13464 1354 aa22.19■■□□□ 1.14
CCNA1-204ENST00000630422 TRPM2O94759 1503 aa22.19■■□□□ 1.14
CCNA1-204ENST00000630422 AMOTL2Q9Y2J4 779 aa22.19■■□□□ 1.14
CCNA1-204ENST00000630422 PTPRUQ92729 1446 aa22.19■■□□□ 1.14
CCNA1-204ENST00000630422 NUP155O75694 1391 aa22.18■■□□□ 1.14
CCNA1-204ENST00000630422 SHPRHQ149N8 1683 aa22.18■■□□□ 1.14
CCNA1-204ENST00000630422 ITGAEP38570 1179 aa22.15■■□□□ 1.14
CCNA1-204ENST00000630422 ZNF772Q68DY9 489 aaPredicted RBP22.14■■□□□ 1.13
CCNA1-204ENST00000630422 BRINP3Q76B58 766 aa22.14■■□□□ 1.13
CCNA1-204ENST00000630422 NRXN3Q9Y4C0 1643 aa22.13■■□□□ 1.13
CCNA1-204ENST00000630422 TRIM52Q96A61 297 aa22.12■■□□□ 1.13
CCNA1-204ENST00000630422 XRN1Q8IZH2 1706 aaKnown RBP22.11■■□□□ 1.13
CCNA1-204ENST00000630422 SPHKAPQ2M3C7 1700 aa22.1■■□□□ 1.13
CCNA1-204ENST00000630422 NUTM2BA6NNL0 878 aaPredicted RBP22.1■■□□□ 1.13
CCNA1-204ENST00000630422 NUTM2EB1AL46 878 aaPredicted RBP22.1■■□□□ 1.13
CCNA1-204ENST00000630422 NUTM2AQ8IVF1 878 aaPredicted RBP22.1■■□□□ 1.13
CCNA1-204ENST00000630422 SETBP1Q9Y6X0 1596 aa22.08■■□□□ 1.13
CCNA1-204ENST00000630422 DCCP43146 1447 aa22.08■■□□□ 1.13
CCNA1-204ENST00000630422 ASXL1Q8IXJ9 1541 aa22.08■■□□□ 1.12
CCNA1-204ENST00000630422 ZNF326Q5BKZ1 582 aaKnown RBP22.07■■□□□ 1.12
CCNA1-204ENST00000630422 UPF1Q92900 1129 aaKnown RBP eCLIP22.07■■□□□ 1.12
CCNA1-204ENST00000630422 MST1RQ04912 1400 aa22.06■■□□□ 1.12
CCNA1-204ENST00000630422 METP08581 1390 aa22.05■■□□□ 1.12
CCNA1-204ENST00000630422 NHSL1Q5SYE7 1610 aa22.05■■□□□ 1.12
CCNA1-204ENST00000630422 RXRBP28702 533 aa22.04■■□□□ 1.12
CCNA1-204ENST00000630422 SETD5Q9C0A6 1442 aa22.03■■□□□ 1.12
CCNA1-204ENST00000630422 PPARGC1BQ86YN6 1023 aaKnown RBP22.03■■□□□ 1.12
CCNA1-204ENST00000630422 AFF2P51816 1311 aa22.01■■□□□ 1.11
CCNA1-204ENST00000630422 DDX17Q92841 729 aaKnown RBP22.01■■□□□ 1.11
CCNA1-204ENST00000630422 CLTCL1P53675 1640 aa22■■□□□ 1.11
CCNA1-204ENST00000630422 NALCNQ8IZF0 1738 aa22■■□□□ 1.11
CCNA1-204ENST00000630422 LRRC59Q96AG4 307 aaKnown RBP21.99■■□□□ 1.11
CCNA1-204ENST00000630422 NEXMIFQ5QGS0 1516 aa21.99■■□□□ 1.11
CCNA1-204ENST00000630422 ADGRL3Q9HAR2 1447 aa21.99■■□□□ 1.11
CCNA1-204ENST00000630422 CDK12Q9NYV4 1490 aaPredicted RBP21.97■■□□□ 1.11
CCNA1-204ENST00000630422 KIF1BO60333 1816 aa21.96■■□□□ 1.11
CCNA1-204ENST00000630422 C8orf37Q96NL8 207 aa21.95■■□□□ 1.1
CCNA1-204ENST00000630422 PNPLA6Q8IY17 1366 aa21.95■■□□□ 1.1
CCNA1-204ENST00000630422 QTRT2Q9H974 415 aaKnown RBP21.92■■□□□ 1.1
CCNA1-204ENST00000630422 C1orf167Q5SNV9 1468 aa21.91■■□□□ 1.1
CCNA1-204ENST00000630422 RGS12O14924 1447 aa21.9■■□□□ 1.1
CCNA1-204ENST00000630422 ADAMTS2O95450 1211 aa21.89■■□□□ 1.09
CCNA1-204ENST00000630422 RBM6P78332 1123 aaKnown RBP21.89■■□□□ 1.09
CCNA1-204ENST00000630422 ROBO2Q9HCK4 1378 aa21.87■■□□□ 1.09
CCNA1-204ENST00000630422 NGLY1Q96IV0 654 aa21.87■■□□□ 1.09
CCNA1-204ENST00000630422 ORAI2Q96SN7 254 aa21.87■■□□□ 1.09
CCNA1-204ENST00000630422 PTCH1Q13635 1447 aa21.86■■□□□ 1.09
CCNA1-204ENST00000630422 LAMC1P11047 1609 aa21.86■■□□□ 1.09
CCNA1-204ENST00000630422 NAIPQ13075 1403 aa21.86■■□□□ 1.09
CCNA1-204ENST00000630422 VGFO15240 615 aaPredicted RBP21.85■■□□□ 1.09
CCNA1-204ENST00000630422 SOS2Q07890 1332 aaPredicted RBP21.84■■□□□ 1.09
CCNA1-204ENST00000630422 RRBP1Q9P2E9 1410 aaKnown RBP21.81■■□□□ 1.08
CCNA1-204ENST00000630422 PPLO60437 1756 aa21.79■■□□□ 1.08
CCNA1-204ENST00000630422 USP21Q9UK80 565 aa21.79■■□□□ 1.08
CCNA1-204ENST00000630422 SRCAPQ6ZRS2 3230 aa21.79■■□□□ 1.08
CCNA1-204ENST00000630422 PRAG1Q86YV5 1406 aa21.78■■□□□ 1.08
CCNA1-204ENST00000630422 RPGRIP1LQ68CZ1 1315 aa21.78■■□□□ 1.08
CCNA1-204ENST00000630422 HFM1A2PYH4 1435 aa21.77■■□□□ 1.08
CCNA1-204ENST00000630422 SLC4A1APQ9BWU0 796 aaKnown RBP21.76■■□□□ 1.07
CCNA1-204ENST00000630422 COL22A1Q8NFW1 1626 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms