RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 MSH6P52701 1360 aa16.5■□□□□ 0.23
SPTAN1-220ENST00000630147 NKTRP30414 1462 aaKnown RBP16.49■□□□□ 0.23
SPTAN1-220ENST00000630147 NOS1P29475 1434 aa16.49■□□□□ 0.23
SPTAN1-220ENST00000630147 ANKRD30AQ9BXX3 1397 aa16.49■□□□□ 0.23
SPTAN1-220ENST00000630147 CHD2O14647 1828 aaKnown RBP16.48■□□□□ 0.23
SPTAN1-220ENST00000630147 NUTM2DQ5VT03 806 aaPredicted RBP16.47■□□□□ 0.23
SPTAN1-220ENST00000630147 COL16A1Q07092 1604 aaPredicted RBP16.46■□□□□ 0.23
SPTAN1-220ENST00000630147 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
SPTAN1-220ENST00000630147 APLP2Q06481 763 aa16.46■□□□□ 0.23
SPTAN1-220ENST00000630147 SLAIN2Q9P270 581 aa16.46■□□□□ 0.23
SPTAN1-220ENST00000630147 LRP6O75581 1613 aa16.45■□□□□ 0.22
SPTAN1-220ENST00000630147 JCADQ9P266 1359 aa16.44■□□□□ 0.22
SPTAN1-220ENST00000630147 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
SPTAN1-220ENST00000630147 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
SPTAN1-220ENST00000630147 ZFYVE9O95405 1425 aa16.44■□□□□ 0.22
SPTAN1-220ENST00000630147 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
SPTAN1-220ENST00000630147 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
SPTAN1-220ENST00000630147 TMEM131LA2VDJ0 1609 aa16.42■□□□□ 0.22
SPTAN1-220ENST00000630147 TRIM52Q96A61 297 aa16.42■□□□□ 0.22
SPTAN1-220ENST00000630147 PLEKHG1Q9ULL1 1385 aa16.41■□□□□ 0.22
SPTAN1-220ENST00000630147 MEX3CQ5U5Q3 659 aaKnown RBP16.41■□□□□ 0.22
SPTAN1-220ENST00000630147 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.41■□□□□ 0.22
SPTAN1-220ENST00000630147 SLC52A1Q9NWF4 448 aa16.4■□□□□ 0.22
SPTAN1-220ENST00000630147 ADGRL2O95490 1459 aa16.39■□□□□ 0.21
SPTAN1-220ENST00000630147 ANKRD50Q9ULJ7 1429 aa16.38■□□□□ 0.21
SPTAN1-220ENST00000630147 E9PCH4 1651 aa16.38■□□□□ 0.21
SPTAN1-220ENST00000630147 RPRD2Q5VT52 1461 aaKnown RBP16.37■□□□□ 0.21
SPTAN1-220ENST00000630147 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
SPTAN1-220ENST00000630147 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
SPTAN1-220ENST00000630147 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
SPTAN1-220ENST00000630147 SHPRHQ149N8 1683 aa16.36■□□□□ 0.21
SPTAN1-220ENST00000630147 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
SPTAN1-220ENST00000630147 UNC13BO14795 1591 aa16.34■□□□□ 0.21
SPTAN1-220ENST00000630147 AHDC1Q5TGY3 1603 aaPredicted RBP16.34■□□□□ 0.21
SPTAN1-220ENST00000630147 ATF3P18847 181 aa16.32■□□□□ 0.2
SPTAN1-220ENST00000630147 SPATA31A6Q5VVP1 1343 aa16.32■□□□□ 0.2
SPTAN1-220ENST00000630147 UPF1Q92900 1129 aaKnown RBP eCLIP16.32■□□□□ 0.2
SPTAN1-220ENST00000630147 TBX22Q9Y458 520 aa16.32■□□□□ 0.2
SPTAN1-220ENST00000630147 DIP2AQ14689 1571 aa16.31■□□□□ 0.2
SPTAN1-220ENST00000630147 PTPRUQ92729 1446 aa16.31■□□□□ 0.2
SPTAN1-220ENST00000630147 HDGFP51858 240 aaKnown RBP16.3■□□□□ 0.2
SPTAN1-220ENST00000630147 ZNF772Q68DY9 489 aaPredicted RBP16.3■□□□□ 0.2
SPTAN1-220ENST00000630147 TRPM2O94759 1503 aa16.29■□□□□ 0.2
SPTAN1-220ENST00000630147 BRINP3Q76B58 766 aa16.29■□□□□ 0.2
SPTAN1-220ENST00000630147 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
SPTAN1-220ENST00000630147 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
SPTAN1-220ENST00000630147 C19orf44Q9H6X5 657 aa16.29■□□□□ 0.2
SPTAN1-220ENST00000630147 AMOTL2Q9Y2J4 779 aa16.29■□□□□ 0.2
SPTAN1-220ENST00000630147 IQGAP3Q86VI3 1631 aa16.28■□□□□ 0.2
SPTAN1-220ENST00000630147 DDX17Q92841 729 aaKnown RBP16.28■□□□□ 0.2
SPTAN1-220ENST00000630147 ASXL1Q8IXJ9 1541 aa16.28■□□□□ 0.2
SPTAN1-220ENST00000630147 NRXN3Q9Y4C0 1643 aa16.27■□□□□ 0.2
SPTAN1-220ENST00000630147 RXRBP28702 533 aa16.26■□□□□ 0.19
SPTAN1-220ENST00000630147 ITGAEP38570 1179 aa16.26■□□□□ 0.19
SPTAN1-220ENST00000630147 NCOA3Q9Y6Q9 1424 aa16.26■□□□□ 0.19
SPTAN1-220ENST00000630147 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
SPTAN1-220ENST00000630147 AFF2P51816 1311 aa16.25■□□□□ 0.19
SPTAN1-220ENST00000630147 NHSL1Q5SYE7 1610 aa16.25■□□□□ 0.19
SPTAN1-220ENST00000630147 MST1RQ04912 1400 aa16.23■□□□□ 0.19
SPTAN1-220ENST00000630147 NUP155O75694 1391 aa16.23■□□□□ 0.19
SPTAN1-220ENST00000630147 PIK3R4Q99570 1358 aa16.23■□□□□ 0.19
SPTAN1-220ENST00000630147 SPHKAPQ2M3C7 1700 aa16.22■□□□□ 0.19
SPTAN1-220ENST00000630147 NALCNQ8IZF0 1738 aa16.22■□□□□ 0.19
SPTAN1-220ENST00000630147 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
SPTAN1-220ENST00000630147 RGS12O14924 1447 aa16.21■□□□□ 0.19
SPTAN1-220ENST00000630147 ZNF326Q5BKZ1 582 aaKnown RBP16.21■□□□□ 0.19
SPTAN1-220ENST00000630147 METP08581 1390 aa16.2■□□□□ 0.18
SPTAN1-220ENST00000630147 SETBP1Q9Y6X0 1596 aa16.19■□□□□ 0.18
SPTAN1-220ENST00000630147 ADAMTS2O95450 1211 aa16.18■□□□□ 0.18
SPTAN1-220ENST00000630147 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
SPTAN1-220ENST00000630147 DCCP43146 1447 aa16.18■□□□□ 0.18
SPTAN1-220ENST00000630147 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
SPTAN1-220ENST00000630147 PNPLA6Q8IY17 1366 aa16.17■□□□□ 0.18
SPTAN1-220ENST00000630147 CDK12Q9NYV4 1490 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-220ENST00000630147 CLTCL1P53675 1640 aa16.16■□□□□ 0.18
SPTAN1-220ENST00000630147 ROCK1Q13464 1354 aa16.15■□□□□ 0.18
SPTAN1-220ENST00000630147 QTRT2Q9H974 415 aaKnown RBP16.15■□□□□ 0.18
SPTAN1-220ENST00000630147 ADGRL3Q9HAR2 1447 aa16.15■□□□□ 0.18
SPTAN1-220ENST00000630147 LRRC59Q96AG4 307 aaKnown RBP16.14■□□□□ 0.17
SPTAN1-220ENST00000630147 NEXMIFQ5QGS0 1516 aa16.14■□□□□ 0.17
SPTAN1-220ENST00000630147 NGLY1Q96IV0 654 aa16.12■□□□□ 0.17
SPTAN1-220ENST00000630147 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
SPTAN1-220ENST00000630147 KIF1BO60333 1816 aa16.1■□□□□ 0.17
SPTAN1-220ENST00000630147 SRCAPQ6ZRS2 3230 aa16.1■□□□□ 0.17
SPTAN1-220ENST00000630147 C1orf167Q5SNV9 1468 aa16.1■□□□□ 0.17
SPTAN1-220ENST00000630147 ORAI2Q96SN7 254 aa16.09■□□□□ 0.17
SPTAN1-220ENST00000630147 USP21Q9UK80 565 aa16.07■□□□□ 0.16
SPTAN1-220ENST00000630147 ROBO2Q9HCK4 1378 aa16.07■□□□□ 0.16
SPTAN1-220ENST00000630147 LAMC1P11047 1609 aa16.05■□□□□ 0.16
SPTAN1-220ENST00000630147 XPCQ01831 940 aaPredicted RBP16.04■□□□□ 0.16
SPTAN1-220ENST00000630147 ATAD2Q6PL18 1390 aa16.03■□□□□ 0.16
SPTAN1-220ENST00000630147 PTCH1Q13635 1447 aa16.02■□□□□ 0.15
SPTAN1-220ENST00000630147 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
SPTAN1-220ENST00000630147 TRPC5Q9UL62 973 aaPredicted RBP16.01■□□□□ 0.15
SPTAN1-220ENST00000630147 COL22A1Q8NFW1 1626 aaPredicted RBP16.01■□□□□ 0.15
SPTAN1-220ENST00000630147 EP400Q96L91 3159 aa16■□□□□ 0.15
SPTAN1-220ENST00000630147 MARF1Q9Y4F3 1742 aaKnown RBP16■□□□□ 0.15
SPTAN1-220ENST00000630147 NUTM2FA1L443 756 aa16■□□□□ 0.15
SPTAN1-220ENST00000630147 PPLO60437 1756 aa16■□□□□ 0.15
SPTAN1-220ENST00000630147 ATRNO75882 1429 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 218.8 ms