RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
SHPRH-211ENST00000629427 CCAR2Q8N163 923 aaKnown RBP14.44□□□□□ -0.1
SHPRH-211ENST00000629427 VGFO15240 615 aaPredicted RBP14.43□□□□□ -0.1
SHPRH-211ENST00000629427 TPM1P09493 284 aa14.43□□□□□ -0.1
SHPRH-211ENST00000629427 PCMTD1Q96MG8 357 aaPredicted RBP14.43□□□□□ -0.1
SHPRH-211ENST00000629427 CHMP4CQ96CF2 233 aa14.43□□□□□ -0.1
SHPRH-211ENST00000629427 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
SHPRH-211ENST00000629427 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
SHPRH-211ENST00000629427 CPLX2Q6PUV4 134 aaKnown RBP14.42□□□□□ -0.1
SHPRH-211ENST00000629427 ST20-MTHFSA0A0A6YYL1 179 aa14.41□□□□□ -0.1
SHPRH-211ENST00000629427 BECN2A8MW95 431 aa14.41□□□□□ -0.1
SHPRH-211ENST00000629427 IPO9Q96P70 1041 aaKnown RBP14.41□□□□□ -0.1
SHPRH-211ENST00000629427 MYBBP1AQ9BQG0 1328 aaKnown RBP14.4□□□□□ -0.1
SHPRH-211ENST00000629427 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
SHPRH-211ENST00000629427 RUFY2Q8WXA3 655 aa14.4□□□□□ -0.1
SHPRH-211ENST00000629427 IFIT2P09913 472 aaKnown RBP14.4□□□□□ -0.1
SHPRH-211ENST00000629427 DDX58O95786 925 aaKnown RBP14.39□□□□□ -0.11
SHPRH-211ENST00000629427 ATP6V1DQ9Y5K8 247 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 PLIN1O60240 522 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 RAPGEF2Q9Y4G8 1499 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 DDX11L8A8MPP1 907 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 TRDNQ13061 729 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 ZKSCAN2Q63HK3 967 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 ANO2Q9NQ90 1003 aa14.39□□□□□ -0.11
SHPRH-211ENST00000629427 NFXL1Q6ZNB6 911 aa14.38□□□□□ -0.11
SHPRH-211ENST00000629427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.38□□□□□ -0.11
SHPRH-211ENST00000629427 ERICH2A1L162 156 aa14.38□□□□□ -0.11
SHPRH-211ENST00000629427 RBM33Q96EV2 1170 aaKnown RBP14.38□□□□□ -0.11
SHPRH-211ENST00000629427 CCDC43Q96MW1 224 aaKnown RBP14.38□□□□□ -0.11
SHPRH-211ENST00000629427 ATF3P18847 181 aa14.37□□□□□ -0.11
SHPRH-211ENST00000629427 CCDC70Q6NSX1 233 aa14.37□□□□□ -0.11
SHPRH-211ENST00000629427 CCDC47Q96A33 483 aaKnown RBP14.37□□□□□ -0.11
SHPRH-211ENST00000629427 CPLX1O14810 134 aa14.37□□□□□ -0.11
SHPRH-211ENST00000629427 CENPQQ7L2Z9 268 aaPredicted RBP14.37□□□□□ -0.11
SHPRH-211ENST00000629427 DDX49Q9Y6V7 483 aaKnown RBP14.37□□□□□ -0.11
SHPRH-211ENST00000629427 E9PSI1 815 aa14.36□□□□□ -0.11
SHPRH-211ENST00000629427 ZKSCAN1P17029 563 aaPredicted RBP14.36□□□□□ -0.11
SHPRH-211ENST00000629427 G3BP1Q13283 466 aaKnown RBP eCLIP14.35□□□□□ -0.11
SHPRH-211ENST00000629427 FYB1O15117 783 aa14.34□□□□□ -0.11
SHPRH-211ENST00000629427 DIAPH1O60610 1272 aaKnown RBP14.34□□□□□ -0.11
SHPRH-211ENST00000629427 RIPK4P57078 832 aa14.34□□□□□ -0.11
SHPRH-211ENST00000629427 HOOK1Q9UJC3 728 aaKnown RBP14.34□□□□□ -0.11
SHPRH-211ENST00000629427 COG6Q9Y2V7 657 aa14.34□□□□□ -0.11
SHPRH-211ENST00000629427 FKBP5Q13451 457 aaPredicted RBP14.33□□□□□ -0.11
SHPRH-211ENST00000629427 ANKRD20A12PQ8NF67 263 aa14.33□□□□□ -0.11
SHPRH-211ENST00000629427 FOSBP53539 338 aa14.33□□□□□ -0.12
SHPRH-211ENST00000629427 CCDC27Q2M243 656 aa14.33□□□□□ -0.12
SHPRH-211ENST00000629427 CRBNQ96SW2 442 aa14.33□□□□□ -0.12
SHPRH-211ENST00000629427 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
SHPRH-211ENST00000629427 IPO7O95373 1038 aaKnown RBP14.32□□□□□ -0.12
SHPRH-211ENST00000629427 RIC3Q7Z5B4 369 aa14.32□□□□□ -0.12
SHPRH-211ENST00000629427 REC8O95072 547 aa14.32□□□□□ -0.12
SHPRH-211ENST00000629427 FAM161AQ3B820 660 aa14.32□□□□□ -0.12
SHPRH-211ENST00000629427 RNF20Q5VTR2 975 aa14.32□□□□□ -0.12
SHPRH-211ENST00000629427 AIMP1Q12904 312 aaKnown RBP14.31□□□□□ -0.12
SHPRH-211ENST00000629427 TSPYL4Q9UJ04 414 aa14.31□□□□□ -0.12
SHPRH-211ENST00000629427 PATL2C9JE40 543 aaKnown RBP14.31□□□□□ -0.12
SHPRH-211ENST00000629427 RAPGEF4Q8WZA2 1011 aa14.31□□□□□ -0.12
SHPRH-211ENST00000629427 ROCK1Q13464 1354 aa14.31□□□□□ -0.12
SHPRH-211ENST00000629427 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
SHPRH-211ENST00000629427 APAF1O14727 1248 aa14.3□□□□□ -0.12
SHPRH-211ENST00000629427 SETQ01105 290 aaPredicted RBP14.3□□□□□ -0.12
SHPRH-211ENST00000629427 SLC4A3P48751 1232 aa14.3□□□□□ -0.12
SHPRH-211ENST00000629427 NUTM2GQ5VZR2 741 aa14.3□□□□□ -0.12
SHPRH-211ENST00000629427 BICD2Q8TD16 824 aa14.3□□□□□ -0.12
SHPRH-211ENST00000629427 HMOX1P09601 288 aa14.3□□□□□ -0.12
SHPRH-211ENST00000629427 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
SHPRH-211ENST00000629427 DDX19BQ9UMR2 479 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 NEUROD6Q96NK8 337 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 USP47Q96K76 1375 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 PTPRGP23470 1445 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 MTMR7Q9Y216 660 aa14.29□□□□□ -0.12
SHPRH-211ENST00000629427 SKOR2Q2VWA4 1001 aaPredicted RBP14.28□□□□□ -0.12
SHPRH-211ENST00000629427 FAM69CQ0P6D2 419 aa14.28□□□□□ -0.12
SHPRH-211ENST00000629427 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.28□□□□□ -0.12
SHPRH-211ENST00000629427 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.12
SHPRH-211ENST00000629427 ODF2Q5BJF6 829 aa14.27□□□□□ -0.12
SHPRH-211ENST00000629427 GPS2Q13227 327 aa14.27□□□□□ -0.12
SHPRH-211ENST00000629427 OSCARQ8IYS5 282 aa14.27□□□□□ -0.12
SHPRH-211ENST00000629427 NAP1L1P55209 391 aaKnown RBP14.27□□□□□ -0.12
SHPRH-211ENST00000629427 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.12
SHPRH-211ENST00000629427 SAFBQ15424 915 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHPRH-211ENST00000629427 WASHC4Q2M389 1173 aa14.27□□□□□ -0.13
SHPRH-211ENST00000629427 CT47A1Q5JQC4 288 aaPredicted RBP14.26□□□□□ -0.13
SHPRH-211ENST00000629427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.26□□□□□ -0.133e-9■■■■■ 73.7
SHPRH-211ENST00000629427 R3HCC1Q9Y3T6 440 aaKnown RBP14.26□□□□□ -0.13
SHPRH-211ENST00000629427 EPS15P42566 896 aa14.26□□□□□ -0.13
SHPRH-211ENST00000629427 HOMER1Q86YM7 354 aa14.26□□□□□ -0.13
SHPRH-211ENST00000629427 EXOC6Q8TAG9 804 aa14.26□□□□□ -0.13
SHPRH-211ENST00000629427 VPS37CA5D8V6 355 aaPredicted RBP14.26□□□□□ -0.13
SHPRH-211ENST00000629427 RALYLQ86SE5 291 aaKnown RBP14.25□□□□□ -0.13
SHPRH-211ENST00000629427 API5Q9BZZ5 524 aaKnown RBP14.25□□□□□ -0.13
SHPRH-211ENST00000629427 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
SHPRH-211ENST00000629427 DZIP1LQ8IYY4 767 aaKnown RBP14.25□□□□□ -0.13
SHPRH-211ENST00000629427 FAM177BA6PVY3 158 aa14.25□□□□□ -0.13
SHPRH-211ENST00000629427 ERC2O15083 957 aa14.25□□□□□ -0.13
SHPRH-211ENST00000629427 PDE4AP27815 886 aa14.25□□□□□ -0.13
SHPRH-211ENST00000629427 SMC3Q9UQE7 1217 aa14.24□□□□□ -0.13
SHPRH-211ENST00000629427 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms