RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
CHD2-216ENST00000629104 LTKP29376 864 aa13.13□□□□□ -0.31
CHD2-216ENST00000629104 TXNDC2Q86VQ3 553 aa13.13□□□□□ -0.31
CHD2-216ENST00000629104 EID1Q9Y6B2 187 aa13.12□□□□□ -0.31
CHD2-216ENST00000629104 RIMS2Q9UQ26 1411 aa13.12□□□□□ -0.31
CHD2-216ENST00000629104 CCDC144AA2RUR9 1427 aa13.11□□□□□ -0.31
CHD2-216ENST00000629104 LTBP4Q8N2S1 1624 aa13.09□□□□□ -0.31
CHD2-216ENST00000629104 NEXMIFQ5QGS0 1516 aa13.08□□□□□ -0.31
CHD2-216ENST00000629104 HDGFP51858 240 aaKnown RBP13.08□□□□□ -0.32
CHD2-216ENST00000629104 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHD2-216ENST00000629104 ZNF335Q9H4Z2 1342 aaPredicted RBP13.07□□□□□ -0.32
CHD2-216ENST00000629104 PPLO60437 1756 aa13.07□□□□□ -0.32
CHD2-216ENST00000629104 PLEKHG1Q9ULL1 1385 aa13.07□□□□□ -0.32
CHD2-216ENST00000629104 PPP1R15AO75807 674 aaPredicted RBP13.06□□□□□ -0.32
CHD2-216ENST00000629104 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
CHD2-216ENST00000629104 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
CHD2-216ENST00000629104 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
CHD2-216ENST00000629104 IFT172Q9UG01 1749 aa13.05□□□□□ -0.32
CHD2-216ENST00000629104 STRCP1A6NGW2 1772 aa13.05□□□□□ -0.32
CHD2-216ENST00000629104 NUTM2DQ5VT03 806 aaPredicted RBP13.05□□□□□ -0.32
CHD2-216ENST00000629104 NRXN3Q9Y4C0 1643 aa13.03□□□□□ -0.32
CHD2-216ENST00000629104 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
CHD2-216ENST00000629104 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
CHD2-216ENST00000629104 BCANQ96GW7 911 aa13.02□□□□□ -0.33
CHD2-216ENST00000629104 SLC26A8Q96RN1 970 aa13.02□□□□□ -0.33
CHD2-216ENST00000629104 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
CHD2-216ENST00000629104 ADAMTS13Q76LX8 1427 aa13.02□□□□□ -0.33
CHD2-216ENST00000629104 CPS1P31327 1500 aa13.02□□□□□ -0.33
CHD2-216ENST00000629104 CERKQ8TCT0 537 aa13.01□□□□□ -0.33
CHD2-216ENST00000629104 CHD2O14647 1828 aaKnown RBP13.01□□□□□ -0.33
CHD2-216ENST00000629104 NWD1Q149M9 1564 aa12.99□□□□□ -0.33
CHD2-216ENST00000629104 IQSEC2Q5JU85 1478 aa12.99□□□□□ -0.33
CHD2-216ENST00000629104 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
CHD2-216ENST00000629104 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
CHD2-216ENST00000629104 TBX22Q9Y458 520 aa12.99□□□□□ -0.33
CHD2-216ENST00000629104 SETD1AO15047 1707 aaKnown RBP12.99□□□□□ -0.33
CHD2-216ENST00000629104 DHX57Q6P158 1386 aaKnown RBP12.98□□□□□ -0.33
CHD2-216ENST00000629104 XIRP1Q702N8 1843 aaKnown RBP12.97□□□□□ -0.33
CHD2-216ENST00000629104 PIK3R4Q99570 1358 aa12.96□□□□□ -0.33
CHD2-216ENST00000629104 KCNA6P17658 529 aa12.96□□□□□ -0.33
CHD2-216ENST00000629104 LRRC7Q96NW7 1537 aa12.96□□□□□ -0.33
CHD2-216ENST00000629104 ALKQ9UM73 1620 aa12.95□□□□□ -0.34
CHD2-216ENST00000629104 PCGF6Q9BYE7 350 aa12.95□□□□□ -0.34
CHD2-216ENST00000629104 NKTRP30414 1462 aaKnown RBP12.95□□□□□ -0.34
CHD2-216ENST00000629104 MYOM2P54296 1465 aa12.95□□□□□ -0.34
CHD2-216ENST00000629104 ADGRF5Q8IZF2 1346 aa12.94□□□□□ -0.34
CHD2-216ENST00000629104 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
CHD2-216ENST00000629104 NRXN1Q9ULB1 1477 aa12.93□□□□□ -0.34
CHD2-216ENST00000629104 PIK3C2GO75747 1445 aa12.93□□□□□ -0.34
CHD2-216ENST00000629104 PTPRUQ92729 1446 aa12.93□□□□□ -0.34
CHD2-216ENST00000629104 METP08581 1390 aa12.93□□□□□ -0.34
CHD2-216ENST00000629104 LAMC1P11047 1609 aa12.91□□□□□ -0.34
CHD2-216ENST00000629104 FBXO41Q8TF61 875 aa12.91□□□□□ -0.34
CHD2-216ENST00000629104 PROSER2Q86WR7 435 aaPredicted RBP12.89□□□□□ -0.35
CHD2-216ENST00000629104 DCAF11Q8TEB1 546 aa12.89□□□□□ -0.35
CHD2-216ENST00000629104 SIN3AQ96ST3 1273 aa12.89□□□□□ -0.35
CHD2-216ENST00000629104 AMOTL2Q9Y2J4 779 aa12.89□□□□□ -0.35
CHD2-216ENST00000629104 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
CHD2-216ENST00000629104 ASXL1Q8IXJ9 1541 aa12.88□□□□□ -0.35
CHD2-216ENST00000629104 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
CHD2-216ENST00000629104 KDM2AQ9Y2K7 1162 aa12.87□□□□□ -0.35
CHD2-216ENST00000629104 KNDC1Q76NI1 1749 aa12.87□□□□□ -0.35
CHD2-216ENST00000629104 PRAG1Q86YV5 1406 aa12.87□□□□□ -0.35
CHD2-216ENST00000629104 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
CHD2-216ENST00000629104 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
CHD2-216ENST00000629104 C14orf93Q9H972 538 aaKnown RBP12.86□□□□□ -0.35
CHD2-216ENST00000629104 NCOA3Q9Y6Q9 1424 aa12.86□□□□□ -0.35
CHD2-216ENST00000629104 UBAP1LF5GYI3 381 aa12.85□□□□□ -0.35
CHD2-216ENST00000629104 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
CHD2-216ENST00000629104 CFAP70Q5T0N1 1121 aa12.85□□□□□ -0.35
CHD2-216ENST00000629104 PTCH1Q13635 1447 aa12.85□□□□□ -0.35
CHD2-216ENST00000629104 KIAA1210Q9ULL0 1709 aa12.84□□□□□ -0.35
CHD2-216ENST00000629104 NALCNQ8IZF0 1738 aa12.83□□□□□ -0.36
CHD2-216ENST00000629104 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.83□□□□□ -0.36
CHD2-216ENST00000629104 ADGRB1O14514 1584 aa12.83□□□□□ -0.36
CHD2-216ENST00000629104 TOM1O60784 492 aa12.83□□□□□ -0.36
CHD2-216ENST00000629104 TMEM132EQ6IEE7 984 aa12.83□□□□□ -0.36
CHD2-216ENST00000629104 L3MBTL2Q969R5 705 aa12.83□□□□□ -0.36
CHD2-216ENST00000629104 LRPPRCP42704 1394 aaKnown RBP12.82□□□□□ -0.36
CHD2-216ENST00000629104 MSH6P52701 1360 aa12.82□□□□□ -0.36
CHD2-216ENST00000629104 ROBO2Q9HCK4 1378 aa12.82□□□□□ -0.36
CHD2-216ENST00000629104 TECPR2O15040 1411 aa12.82□□□□□ -0.36
CHD2-216ENST00000629104 YTHDC2Q9H6S0 1430 aaKnown RBP12.82□□□□□ -0.36
CHD2-216ENST00000629104 ABCC11Q96J66 1382 aa12.81□□□□□ -0.36
CHD2-216ENST00000629104 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
CHD2-216ENST00000629104 C19orf44Q9H6X5 657 aa12.8□□□□□ -0.36
CHD2-216ENST00000629104 STK26Q9P289 416 aa12.8□□□□□ -0.36
CHD2-216ENST00000629104 ADGRL3Q9HAR2 1447 aa12.79□□□□□ -0.36
CHD2-216ENST00000629104 DCCP43146 1447 aa12.79□□□□□ -0.36
CHD2-216ENST00000629104 DLC1Q96QB1 1528 aa12.78□□□□□ -0.36
CHD2-216ENST00000629104 TRPM1Q7Z4N2 1603 aa12.78□□□□□ -0.36
CHD2-216ENST00000629104 PIP4K2BP78356 416 aa12.78□□□□□ -0.36
CHD2-216ENST00000629104 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
CHD2-216ENST00000629104 TONSLQ96HA7 1378 aa12.78□□□□□ -0.36
CHD2-216ENST00000629104 FAM135BQ49AJ0 1406 aa12.78□□□□□ -0.36
CHD2-216ENST00000629104 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
CHD2-216ENST00000629104 ROBO1Q9Y6N7 1651 aa12.77□□□□□ -0.37
CHD2-216ENST00000629104 ARHGEF28Q8N1W1 1705 aaKnown RBP12.76□□□□□ -0.37
CHD2-216ENST00000629104 ATF3P18847 181 aa12.76□□□□□ -0.37
CHD2-216ENST00000629104 CADPS2Q86UW7 1296 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms