RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 TMEM131LA2VDJ0 1609 aa25.56■■□□□ 1.68
TRIM29-221ENST00000627238 SLC26A8Q96RN1 970 aa25.56■■□□□ 1.68
TRIM29-221ENST00000627238 MYO5BQ9ULV0 1848 aa25.55■■□□□ 1.68
TRIM29-221ENST00000627238 ROCK1Q13464 1354 aa25.55■■□□□ 1.68
TRIM29-221ENST00000627238 PLEKHG1Q9ULL1 1385 aa25.55■■□□□ 1.68
TRIM29-221ENST00000627238 CHD2O14647 1828 aaKnown RBP25.52■■□□□ 1.68
TRIM29-221ENST00000627238 ROBO1Q9Y6N7 1651 aa25.52■■□□□ 1.68
TRIM29-221ENST00000627238 IQGAP3Q86VI3 1631 aa25.51■■□□□ 1.67
TRIM29-221ENST00000627238 E9PCH4 1651 aa25.5■■□□□ 1.67
TRIM29-221ENST00000627238 PROSER2Q86WR7 435 aaPredicted RBP25.5■■□□□ 1.67
TRIM29-221ENST00000627238 RIMS2Q9UQ26 1411 aa25.49■■□□□ 1.67
TRIM29-221ENST00000627238 HDGFP51858 240 aaKnown RBP25.49■■□□□ 1.67
TRIM29-221ENST00000627238 NCOA3Q9Y6Q9 1424 aa25.46■■□□□ 1.67
TRIM29-221ENST00000627238 SENP3Q9H4L4 574 aaPredicted RBP25.46■■□□□ 1.67
TRIM29-221ENST00000627238 TBX22Q9Y458 520 aa25.45■■□□□ 1.66
TRIM29-221ENST00000627238 MSH6P52701 1360 aa25.44■■□□□ 1.66
TRIM29-221ENST00000627238 DIP2AQ14689 1571 aa25.44■■□□□ 1.66
TRIM29-221ENST00000627238 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.44■■□□□ 1.66
TRIM29-221ENST00000627238 RGS17Q9UGC6 210 aaPredicted RBP25.44■■□□□ 1.66
TRIM29-221ENST00000627238 ADAMTS13Q76LX8 1427 aa25.41■■□□□ 1.66
TRIM29-221ENST00000627238 PIK3R4Q99570 1358 aa25.41■■□□□ 1.66
TRIM29-221ENST00000627238 RBM33Q96EV2 1170 aaKnown RBP25.4■■□□□ 1.66
TRIM29-221ENST00000627238 PPP1R15AO75807 674 aaPredicted RBP25.39■■□□□ 1.66
TRIM29-221ENST00000627238 BCANQ96GW7 911 aa25.39■■□□□ 1.66
TRIM29-221ENST00000627238 SLAIN2Q9P270 581 aa25.38■■□□□ 1.65
TRIM29-221ENST00000627238 PHLPP1O60346 1717 aa25.35■■□□□ 1.65
TRIM29-221ENST00000627238 NUP155O75694 1391 aa25.34■■□□□ 1.65
TRIM29-221ENST00000627238 TRPM2O94759 1503 aa25.32■■□□□ 1.64
TRIM29-221ENST00000627238 COL16A1Q07092 1604 aaPredicted RBP25.31■■□□□ 1.64
TRIM29-221ENST00000627238 JCADQ9P266 1359 aa25.31■■□□□ 1.64
TRIM29-221ENST00000627238 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.3■■□□□ 1.64
TRIM29-221ENST00000627238 CHGAP10645 457 aaKnown RBP25.3■■□□□ 1.64
TRIM29-221ENST00000627238 SPHKAPQ2M3C7 1700 aa25.29■■□□□ 1.64
TRIM29-221ENST00000627238 SETBP1Q9Y6X0 1596 aa25.27■■□□□ 1.64
TRIM29-221ENST00000627238 AHDC1Q5TGY3 1603 aaPredicted RBP25.27■■□□□ 1.64
TRIM29-221ENST00000627238 NRXN3Q9Y4C0 1643 aa25.27■■□□□ 1.64
TRIM29-221ENST00000627238 POTEAQ6S8J7 498 aa25.26■■□□□ 1.63
TRIM29-221ENST00000627238 C19orf44Q9H6X5 657 aa25.26■■□□□ 1.63
TRIM29-221ENST00000627238 CADPS2Q86UW7 1296 aa25.25■■□□□ 1.63
TRIM29-221ENST00000627238 PTPRUQ92729 1446 aa25.25■■□□□ 1.63
TRIM29-221ENST00000627238 XRN1Q8IZH2 1706 aaKnown RBP25.25■■□□□ 1.63
TRIM29-221ENST00000627238 DCCP43146 1447 aa25.24■■□□□ 1.63
TRIM29-221ENST00000627238 NUTM2DQ5VT03 806 aaPredicted RBP25.23■■□□□ 1.63
TRIM29-221ENST00000627238 AMOTL2Q9Y2J4 779 aa25.21■■□□□ 1.63
TRIM29-221ENST00000627238 SHPRHQ149N8 1683 aa25.2■■□□□ 1.63
TRIM29-221ENST00000627238 SPATA31A6Q5VVP1 1343 aa25.19■■□□□ 1.62
TRIM29-221ENST00000627238 ATF3P18847 181 aa25.18■■□□□ 1.62
TRIM29-221ENST00000627238 ITGAEP38570 1179 aa25.18■■□□□ 1.62
TRIM29-221ENST00000627238 C14orf37Q86TY3 774 aa25.18■■□□□ 1.62
TRIM29-221ENST00000627238 RRBP1Q9P2E9 1410 aaKnown RBP25.18■■□□□ 1.62
TRIM29-221ENST00000627238 LRP6O75581 1613 aa25.15■■□□□ 1.62
TRIM29-221ENST00000627238 CLTCL1P53675 1640 aa25.15■■□□□ 1.62
TRIM29-221ENST00000627238 NEXMIFQ5QGS0 1516 aa25.15■■□□□ 1.62
TRIM29-221ENST00000627238 NAIPQ13075 1403 aa25.12■■□□□ 1.61
TRIM29-221ENST00000627238 BRINP3Q76B58 766 aa25.12■■□□□ 1.61
TRIM29-221ENST00000627238 METP08581 1390 aa25.11■■□□□ 1.61
TRIM29-221ENST00000627238 ASXL1Q8IXJ9 1541 aa25.1■■□□□ 1.61
TRIM29-221ENST00000627238 MST1RQ04912 1400 aa25.1■■□□□ 1.61
TRIM29-221ENST00000627238 KIF1BO60333 1816 aa25.09■■□□□ 1.61
TRIM29-221ENST00000627238 NHSL1Q5SYE7 1610 aa25.09■■□□□ 1.61
TRIM29-221ENST00000627238 ZNF326Q5BKZ1 582 aaKnown RBP25.08■■□□□ 1.61
TRIM29-221ENST00000627238 SETD5Q9C0A6 1442 aa25.08■■□□□ 1.61
TRIM29-221ENST00000627238 ADGRL3Q9HAR2 1447 aa25.07■■□□□ 1.6
TRIM29-221ENST00000627238 PPARGC1BQ86YN6 1023 aaKnown RBP25.06■■□□□ 1.6
TRIM29-221ENST00000627238 PRAG1Q86YV5 1406 aa25.05■■□□□ 1.6
TRIM29-221ENST00000627238 SETD1AO15047 1707 aaKnown RBP25.05■■□□□ 1.6
TRIM29-221ENST00000627238 NALCNQ8IZF0 1738 aa25.04■■□□□ 1.6
TRIM29-221ENST00000627238 ZNF772Q68DY9 489 aaPredicted RBP25.04■■□□□ 1.6
TRIM29-221ENST00000627238 HFM1A2PYH4 1435 aa25.03■■□□□ 1.6
TRIM29-221ENST00000627238 PTCH1Q13635 1447 aa25.03■■□□□ 1.6
TRIM29-221ENST00000627238 LAMC1P11047 1609 aa25.01■■□□□ 1.59
TRIM29-221ENST00000627238 MEX3CQ5U5Q3 659 aaKnown RBP24.99■■□□□ 1.59
TRIM29-221ENST00000627238 CDK12Q9NYV4 1490 aaPredicted RBP24.96■■□□□ 1.59
TRIM29-221ENST00000627238 RPGRIP1LQ68CZ1 1315 aa24.96■■□□□ 1.59
TRIM29-221ENST00000627238 VGFO15240 615 aaPredicted RBP24.96■■□□□ 1.59
TRIM29-221ENST00000627238 LRRC59Q96AG4 307 aaKnown RBP24.96■■□□□ 1.59
TRIM29-221ENST00000627238 PPLO60437 1756 aa24.94■■□□□ 1.58
TRIM29-221ENST00000627238 C1orf167Q5SNV9 1468 aa24.94■■□□□ 1.58
TRIM29-221ENST00000627238 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
TRIM29-221ENST00000627238 ROBO2Q9HCK4 1378 aa24.91■■□□□ 1.58
TRIM29-221ENST00000627238 RXRBP28702 533 aa24.88■■□□□ 1.57
TRIM29-221ENST00000627238 SLC4A1APQ9BWU0 796 aaKnown RBP24.88■■□□□ 1.57
TRIM29-221ENST00000627238 NUTM2BA6NNL0 878 aaPredicted RBP24.87■■□□□ 1.57
TRIM29-221ENST00000627238 NUTM2EB1AL46 878 aaPredicted RBP24.87■■□□□ 1.57
TRIM29-221ENST00000627238 NUTM2AQ8IVF1 878 aaPredicted RBP24.87■■□□□ 1.57
TRIM29-221ENST00000627238 TRIM52Q96A61 297 aa24.87■■□□□ 1.57
TRIM29-221ENST00000627238 AFF2P51816 1311 aa24.86■■□□□ 1.57
TRIM29-221ENST00000627238 UPF1Q92900 1129 aaKnown RBP eCLIP24.86■■□□□ 1.57
TRIM29-221ENST00000627238 SOS2Q07890 1332 aaPredicted RBP24.85■■□□□ 1.57
TRIM29-221ENST00000627238 DDX17Q92841 729 aaKnown RBP24.84■■□□□ 1.57
TRIM29-221ENST00000627238 CDC42BPGQ6DT37 1551 aa24.83■■□□□ 1.57
TRIM29-221ENST00000627238 TECPR2O15040 1411 aa24.8■■□□□ 1.56
TRIM29-221ENST00000627238 COL22A1Q8NFW1 1626 aaPredicted RBP24.8■■□□□ 1.56
TRIM29-221ENST00000627238 IFT172Q9UG01 1749 aa24.8■■□□□ 1.56
TRIM29-221ENST00000627238 SPATA31E1Q6ZUB1 1445 aa24.79■■□□□ 1.56
TRIM29-221ENST00000627238 ORAI2Q96SN7 254 aa24.78■■□□□ 1.56
TRIM29-221ENST00000627238 C8orf37Q96NL8 207 aa24.77■■□□□ 1.56
TRIM29-221ENST00000627238 CCDC144AA2RUR9 1427 aa24.77■■□□□ 1.56
TRIM29-221ENST00000627238 RBM6P78332 1123 aaKnown RBP24.76■■□□□ 1.55
TRIM29-221ENST00000627238 ANKRD30BQ9BXX2 1392 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms