RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 PROSER2Q86WR7 435 aaPredicted RBP16.72■□□□□ 0.27
TCF4-253ENST00000626466 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
TCF4-253ENST00000626466 SETD1AO15047 1707 aaKnown RBP16.68■□□□□ 0.26
TCF4-253ENST00000626466 ANKRD30AQ9BXX3 1397 aa16.68■□□□□ 0.26
TCF4-253ENST00000626466 ZFYVE9O95405 1425 aa16.67■□□□□ 0.26
TCF4-253ENST00000626466 MSH6P52701 1360 aa16.64■□□□□ 0.26
TCF4-253ENST00000626466 ADGRL2O95490 1459 aa16.64■□□□□ 0.25
TCF4-253ENST00000626466 PHLPP1O60346 1717 aa16.64■□□□□ 0.25
TCF4-253ENST00000626466 LRP6O75581 1613 aa16.63■□□□□ 0.25
TCF4-253ENST00000626466 BCANQ96GW7 911 aa16.63■□□□□ 0.25
TCF4-253ENST00000626466 COL16A1Q07092 1604 aaPredicted RBP16.63■□□□□ 0.25
TCF4-253ENST00000626466 PLEKHG1Q9ULL1 1385 aa16.63■□□□□ 0.25
TCF4-253ENST00000626466 RIMS2Q9UQ26 1411 aa16.62■□□□□ 0.25
TCF4-253ENST00000626466 MYO5BQ9ULV0 1848 aa16.62■□□□□ 0.25
TCF4-253ENST00000626466 SLAIN2Q9P270 581 aa16.62■□□□□ 0.25
TCF4-253ENST00000626466 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
TCF4-253ENST00000626466 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
TCF4-253ENST00000626466 JCADQ9P266 1359 aa16.61■□□□□ 0.25
TCF4-253ENST00000626466 TMEM131LA2VDJ0 1609 aa16.6■□□□□ 0.25
TCF4-253ENST00000626466 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
TCF4-253ENST00000626466 RPRD2Q5VT52 1461 aaKnown RBP16.6■□□□□ 0.25
TCF4-253ENST00000626466 CHD2O14647 1828 aaKnown RBP16.59■□□□□ 0.25
TCF4-253ENST00000626466 NUTM2DQ5VT03 806 aaPredicted RBP16.58■□□□□ 0.24
TCF4-253ENST00000626466 ADAMTS13Q76LX8 1427 aa16.58■□□□□ 0.24
TCF4-253ENST00000626466 PPP1R15AO75807 674 aaPredicted RBP16.57■□□□□ 0.24
TCF4-253ENST00000626466 APLP2Q06481 763 aa16.57■□□□□ 0.24
TCF4-253ENST00000626466 FAM50AQ14320 339 aaKnown RBP16.56■□□□□ 0.24
TCF4-253ENST00000626466 KCNA4P22459 653 aa16.55■□□□□ 0.24
TCF4-253ENST00000626466 TBX22Q9Y458 520 aa16.54■□□□□ 0.24
TCF4-253ENST00000626466 UNC13BO14795 1591 aa16.54■□□□□ 0.24
TCF4-253ENST00000626466 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
TCF4-253ENST00000626466 CHGAP10645 457 aaKnown RBP16.53■□□□□ 0.24
TCF4-253ENST00000626466 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.53■□□□□ 0.24
TCF4-253ENST00000626466 E9PCH4 1651 aa16.53■□□□□ 0.24
TCF4-253ENST00000626466 AHDC1Q5TGY3 1603 aaPredicted RBP16.52■□□□□ 0.24
TCF4-253ENST00000626466 C14orf37Q86TY3 774 aa16.51■□□□□ 0.23
TCF4-253ENST00000626466 TRIM52Q96A61 297 aa16.5■□□□□ 0.23
TCF4-253ENST00000626466 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
TCF4-253ENST00000626466 DIP2AQ14689 1571 aa16.5■□□□□ 0.23
TCF4-253ENST00000626466 SPATA31A6Q5VVP1 1343 aa16.49■□□□□ 0.23
TCF4-253ENST00000626466 SHPRHQ149N8 1683 aa16.49■□□□□ 0.23
TCF4-253ENST00000626466 MEX3CQ5U5Q3 659 aaKnown RBP16.48■□□□□ 0.23
TCF4-253ENST00000626466 BRINP3Q76B58 766 aa16.48■□□□□ 0.23
TCF4-253ENST00000626466 UPF1Q92900 1129 aaKnown RBP eCLIP16.48■□□□□ 0.23
TCF4-253ENST00000626466 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.47■□□□□ 0.23
TCF4-253ENST00000626466 C19orf44Q9H6X5 657 aa16.47■□□□□ 0.23
TCF4-253ENST00000626466 TRPM2O94759 1503 aa16.46■□□□□ 0.23
TCF4-253ENST00000626466 IQGAP3Q86VI3 1631 aa16.46■□□□□ 0.23
TCF4-253ENST00000626466 NRXN3Q9Y4C0 1643 aa16.46■□□□□ 0.23
TCF4-253ENST00000626466 CADPS2Q86UW7 1296 aa16.46■□□□□ 0.23
TCF4-253ENST00000626466 NUTM2BA6NNL0 878 aaPredicted RBP16.45■□□□□ 0.22
TCF4-253ENST00000626466 NUTM2EB1AL46 878 aaPredicted RBP16.45■□□□□ 0.22
TCF4-253ENST00000626466 ATF3P18847 181 aa16.45■□□□□ 0.22
TCF4-253ENST00000626466 HDGFP51858 240 aaKnown RBP16.45■□□□□ 0.22
TCF4-253ENST00000626466 NUTM2AQ8IVF1 878 aaPredicted RBP16.45■□□□□ 0.22
TCF4-253ENST00000626466 AMOTL2Q9Y2J4 779 aa16.45■□□□□ 0.22
TCF4-253ENST00000626466 PIK3R4Q99570 1358 aa16.45■□□□□ 0.22
TCF4-253ENST00000626466 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
TCF4-253ENST00000626466 PPP4R3CPQ6ZMV5 832 aa16.44■□□□□ 0.22
TCF4-253ENST00000626466 XRN1Q8IZH2 1706 aaKnown RBP16.44■□□□□ 0.22
TCF4-253ENST00000626466 ZNF772Q68DY9 489 aaPredicted RBP16.43■□□□□ 0.22
TCF4-253ENST00000626466 MST1RQ04912 1400 aa16.42■□□□□ 0.22
TCF4-253ENST00000626466 DDX17Q92841 729 aaKnown RBP16.41■□□□□ 0.22
TCF4-253ENST00000626466 NUP155O75694 1391 aa16.4■□□□□ 0.22
TCF4-253ENST00000626466 METP08581 1390 aa16.4■□□□□ 0.22
TCF4-253ENST00000626466 DCCP43146 1447 aa16.4■□□□□ 0.22
TCF4-253ENST00000626466 AFF2P51816 1311 aa16.4■□□□□ 0.22
TCF4-253ENST00000626466 ROCK1Q13464 1354 aa16.39■□□□□ 0.21
TCF4-253ENST00000626466 SETBP1Q9Y6X0 1596 aa16.39■□□□□ 0.21
TCF4-253ENST00000626466 SETD5Q9C0A6 1442 aa16.39■□□□□ 0.21
TCF4-253ENST00000626466 RXRBP28702 533 aa16.39■□□□□ 0.21
TCF4-253ENST00000626466 NHSL1Q5SYE7 1610 aa16.38■□□□□ 0.21
TCF4-253ENST00000626466 RGS12O14924 1447 aa16.37■□□□□ 0.21
TCF4-253ENST00000626466 CDK12Q9NYV4 1490 aaPredicted RBP16.36■□□□□ 0.21
TCF4-253ENST00000626466 PNPLA6Q8IY17 1366 aa16.36■□□□□ 0.21
TCF4-253ENST00000626466 ITGAEP38570 1179 aa16.35■□□□□ 0.21
TCF4-253ENST00000626466 NALCNQ8IZF0 1738 aa16.35■□□□□ 0.21
TCF4-253ENST00000626466 ADGRL3Q9HAR2 1447 aa16.35■□□□□ 0.21
TCF4-253ENST00000626466 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.21
TCF4-253ENST00000626466 C8orf37Q96NL8 207 aa16.33■□□□□ 0.2
TCF4-253ENST00000626466 NEXMIFQ5QGS0 1516 aa16.33■□□□□ 0.2
TCF4-253ENST00000626466 CLTCL1P53675 1640 aa16.32■□□□□ 0.2
TCF4-253ENST00000626466 ZNF326Q5BKZ1 582 aaKnown RBP16.31■□□□□ 0.2
TCF4-253ENST00000626466 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
TCF4-253ENST00000626466 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
TCF4-253ENST00000626466 LRRC59Q96AG4 307 aaKnown RBP16.29■□□□□ 0.2
TCF4-253ENST00000626466 QTRT2Q9H974 415 aaKnown RBP16.29■□□□□ 0.2
TCF4-253ENST00000626466 ADAMTS2O95450 1211 aa16.28■□□□□ 0.2
TCF4-253ENST00000626466 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
TCF4-253ENST00000626466 RBM6P78332 1123 aaKnown RBP16.26■□□□□ 0.19
TCF4-253ENST00000626466 ORAI2Q96SN7 254 aa16.26■□□□□ 0.19
TCF4-253ENST00000626466 LAMC1P11047 1609 aa16.25■□□□□ 0.19
TCF4-253ENST00000626466 PTCH1Q13635 1447 aa16.24■□□□□ 0.19
TCF4-253ENST00000626466 NGLY1Q96IV0 654 aa16.23■□□□□ 0.19
TCF4-253ENST00000626466 SOS2Q07890 1332 aaPredicted RBP16.22■□□□□ 0.19
TCF4-253ENST00000626466 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
TCF4-253ENST00000626466 USP21Q9UK80 565 aa16.19■□□□□ 0.18
TCF4-253ENST00000626466 ATRNO75882 1429 aa16.19■□□□□ 0.18
TCF4-253ENST00000626466 PRAG1Q86YV5 1406 aa16.19■□□□□ 0.18
TCF4-253ENST00000626466 MYOM2P54296 1465 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms