RNA–Protein interactions for RNA: ENST00000626422.2

MECP2-215, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-215ENST00000626422 GCC2Q8IWJ2 1684 aa19.59■□□□□ 0.73
MECP2-215ENST00000626422 PHLPP1O60346 1717 aa19.58■□□□□ 0.72
MECP2-215ENST00000626422 NKTRP30414 1462 aaKnown RBP19.57■□□□□ 0.72
MECP2-215ENST00000626422 BCANQ96GW7 911 aa19.57■□□□□ 0.72
MECP2-215ENST00000626422 ADGRL2O95490 1459 aa19.56■□□□□ 0.72
MECP2-215ENST00000626422 SLC52A1Q9NWF4 448 aa19.56■□□□□ 0.72
MECP2-215ENST00000626422 ZFYVE9O95405 1425 aa19.56■□□□□ 0.72
MECP2-215ENST00000626422 SETD1AO15047 1707 aaKnown RBP19.55■□□□□ 0.72
MECP2-215ENST00000626422 SLAIN2Q9P270 581 aa19.55■□□□□ 0.72
MECP2-215ENST00000626422 TMEM131LA2VDJ0 1609 aa19.54■□□□□ 0.72
MECP2-215ENST00000626422 MSH6P52701 1360 aa19.53■□□□□ 0.72
MECP2-215ENST00000626422 PLEKHG1Q9ULL1 1385 aa19.52■□□□□ 0.72
MECP2-215ENST00000626422 RIMS2Q9UQ26 1411 aa19.51■□□□□ 0.71
MECP2-215ENST00000626422 RPRD2Q5VT52 1461 aaKnown RBP19.51■□□□□ 0.71
MECP2-215ENST00000626422 COL16A1Q07092 1604 aaPredicted RBP19.51■□□□□ 0.71
MECP2-215ENST00000626422 ANKRD50Q9ULJ7 1429 aa19.51■□□□□ 0.71
MECP2-215ENST00000626422 FAM50AQ14320 339 aaKnown RBP19.5■□□□□ 0.71
MECP2-215ENST00000626422 NUTM2DQ5VT03 806 aaPredicted RBP19.48■□□□□ 0.71
MECP2-215ENST00000626422 E9PCH4 1651 aa19.48■□□□□ 0.71
MECP2-215ENST00000626422 JCADQ9P266 1359 aa19.47■□□□□ 0.71
MECP2-215ENST00000626422 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.47■□□□□ 0.71
MECP2-215ENST00000626422 UNC13BO14795 1591 aa19.46■□□□□ 0.71
MECP2-215ENST00000626422 PPP1R15AO75807 674 aaPredicted RBP19.46■□□□□ 0.71
MECP2-215ENST00000626422 TBX22Q9Y458 520 aa19.46■□□□□ 0.71
MECP2-215ENST00000626422 ADAMTS13Q76LX8 1427 aa19.45■□□□□ 0.7
MECP2-215ENST00000626422 LRP6O75581 1613 aa19.45■□□□□ 0.7
MECP2-215ENST00000626422 CHGAP10645 457 aaKnown RBP19.45■□□□□ 0.7
MECP2-215ENST00000626422 HDGFP51858 240 aaKnown RBP19.42■□□□□ 0.7
MECP2-215ENST00000626422 NCOA3Q9Y6Q9 1424 aa19.41■□□□□ 0.7
MECP2-215ENST00000626422 C14orf37Q86TY3 774 aa19.4■□□□□ 0.7
MECP2-215ENST00000626422 SHPRHQ149N8 1683 aa19.4■□□□□ 0.7
MECP2-215ENST00000626422 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.39■□□□□ 0.69
MECP2-215ENST00000626422 PTPRUQ92729 1446 aa19.39■□□□□ 0.69
MECP2-215ENST00000626422 AHDC1Q5TGY3 1603 aaPredicted RBP19.39■□□□□ 0.69
MECP2-215ENST00000626422 IQGAP3Q86VI3 1631 aa19.39■□□□□ 0.69
MECP2-215ENST00000626422 DIP2AQ14689 1571 aa19.38■□□□□ 0.69
MECP2-215ENST00000626422 C19orf44Q9H6X5 657 aa19.37■□□□□ 0.69
MECP2-215ENST00000626422 SPATA31A6Q5VVP1 1343 aa19.36■□□□□ 0.69
MECP2-215ENST00000626422 PIK3R4Q99570 1358 aa19.35■□□□□ 0.69
MECP2-215ENST00000626422 ATF3P18847 181 aa19.35■□□□□ 0.69
MECP2-215ENST00000626422 CADPS2Q86UW7 1296 aa19.35■□□□□ 0.69
MECP2-215ENST00000626422 AMOTL2Q9Y2J4 779 aa19.35■□□□□ 0.69
MECP2-215ENST00000626422 NRXN3Q9Y4C0 1643 aa19.34■□□□□ 0.69
MECP2-215ENST00000626422 TRPM2O94759 1503 aa19.34■□□□□ 0.69
MECP2-215ENST00000626422 MEX3CQ5U5Q3 659 aaKnown RBP19.33■□□□□ 0.68
MECP2-215ENST00000626422 BRINP3Q76B58 766 aa19.33■□□□□ 0.68
MECP2-215ENST00000626422 TRIM52Q96A61 297 aa19.33■□□□□ 0.68
MECP2-215ENST00000626422 UPF1Q92900 1129 aaKnown RBP eCLIP19.32■□□□□ 0.68
MECP2-215ENST00000626422 XRN1Q8IZH2 1706 aaKnown RBP19.31■□□□□ 0.68
MECP2-215ENST00000626422 NUP155O75694 1391 aa19.31■□□□□ 0.68
MECP2-215ENST00000626422 ROCK1Q13464 1354 aa19.31■□□□□ 0.68
MECP2-215ENST00000626422 ZNF772Q68DY9 489 aaPredicted RBP19.3■□□□□ 0.68
MECP2-215ENST00000626422 NUTM2BA6NNL0 878 aaPredicted RBP19.29■□□□□ 0.68
MECP2-215ENST00000626422 NUTM2EB1AL46 878 aaPredicted RBP19.29■□□□□ 0.68
MECP2-215ENST00000626422 NUTM2AQ8IVF1 878 aaPredicted RBP19.29■□□□□ 0.68
MECP2-215ENST00000626422 NHSL1Q5SYE7 1610 aa19.28■□□□□ 0.68
MECP2-215ENST00000626422 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
MECP2-215ENST00000626422 ASXL1Q8IXJ9 1541 aa19.27■□□□□ 0.68
MECP2-215ENST00000626422 ITGAEP38570 1179 aa19.27■□□□□ 0.68
MECP2-215ENST00000626422 SETBP1Q9Y6X0 1596 aa19.26■□□□□ 0.67
MECP2-215ENST00000626422 MST1RQ04912 1400 aa19.25■□□□□ 0.67
MECP2-215ENST00000626422 METP08581 1390 aa19.25■□□□□ 0.67
MECP2-215ENST00000626422 RXRBP28702 533 aa19.25■□□□□ 0.67
MECP2-215ENST00000626422 DDX17Q92841 729 aaKnown RBP19.25■□□□□ 0.67
MECP2-215ENST00000626422 DCCP43146 1447 aa19.24■□□□□ 0.67
MECP2-215ENST00000626422 SETD5Q9C0A6 1442 aa19.23■□□□□ 0.67
MECP2-215ENST00000626422 AFF2P51816 1311 aa19.23■□□□□ 0.67
MECP2-215ENST00000626422 NALCNQ8IZF0 1738 aa19.22■□□□□ 0.67
MECP2-215ENST00000626422 ZNF326Q5BKZ1 582 aaKnown RBP19.21■□□□□ 0.67
MECP2-215ENST00000626422 PPARGC1BQ86YN6 1023 aaKnown RBP19.2■□□□□ 0.66
MECP2-215ENST00000626422 CLTCL1P53675 1640 aa19.19■□□□□ 0.66
MECP2-215ENST00000626422 NEXMIFQ5QGS0 1516 aa19.19■□□□□ 0.66
MECP2-215ENST00000626422 CDK12Q9NYV4 1490 aaPredicted RBP19.18■□□□□ 0.66
MECP2-215ENST00000626422 LRRC59Q96AG4 307 aaKnown RBP19.18■□□□□ 0.66
MECP2-215ENST00000626422 PNPLA6Q8IY17 1366 aa19.17■□□□□ 0.66
MECP2-215ENST00000626422 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
MECP2-215ENST00000626422 KIF1BO60333 1816 aa19.16■□□□□ 0.66
MECP2-215ENST00000626422 C8orf37Q96NL8 207 aa19.15■□□□□ 0.66
MECP2-215ENST00000626422 QTRT2Q9H974 415 aaKnown RBP19.15■□□□□ 0.66
MECP2-215ENST00000626422 RGS12O14924 1447 aa19.15■□□□□ 0.66
MECP2-215ENST00000626422 LAMC1P11047 1609 aa19.11■□□□□ 0.65
MECP2-215ENST00000626422 C1orf167Q5SNV9 1468 aa19.11■□□□□ 0.65
MECP2-215ENST00000626422 RBM6P78332 1123 aaKnown RBP19.11■□□□□ 0.65
MECP2-215ENST00000626422 ADAMTS2O95450 1211 aa19.1■□□□□ 0.65
MECP2-215ENST00000626422 ORAI2Q96SN7 254 aa19.1■□□□□ 0.65
MECP2-215ENST00000626422 ROBO2Q9HCK4 1378 aa19.08■□□□□ 0.65
MECP2-215ENST00000626422 NGLY1Q96IV0 654 aa19.08■□□□□ 0.64
MECP2-215ENST00000626422 SOS2Q07890 1332 aaPredicted RBP19.06■□□□□ 0.64
MECP2-215ENST00000626422 PTCH1Q13635 1447 aa19.04■□□□□ 0.64
MECP2-215ENST00000626422 SRCAPQ6ZRS2 3230 aa19.04■□□□□ 0.64
MECP2-215ENST00000626422 NAIPQ13075 1403 aa19.03■□□□□ 0.64
MECP2-215ENST00000626422 PPLO60437 1756 aa19.03■□□□□ 0.64
MECP2-215ENST00000626422 COL22A1Q8NFW1 1626 aaPredicted RBP19.01■□□□□ 0.63
MECP2-215ENST00000626422 VGFO15240 615 aaPredicted RBP19.01■□□□□ 0.63
MECP2-215ENST00000626422 USP21Q9UK80 565 aa19.01■□□□□ 0.63
MECP2-215ENST00000626422 EP400Q96L91 3159 aa18.99■□□□□ 0.63
MECP2-215ENST00000626422 FNBP4Q8N3X1 1017 aaPredicted RBP18.99■□□□□ 0.63
MECP2-215ENST00000626422 MARF1Q9Y4F3 1742 aaKnown RBP18.99■□□□□ 0.63
MECP2-215ENST00000626422 PRAG1Q86YV5 1406 aa18.99■□□□□ 0.63
MECP2-215ENST00000626422 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms