RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 ZFYVE9O95405 1425 aa22.32■■□□□ 1.16
TUBB3-215ENST00000625617 FAM135BQ49AJ0 1406 aa22.32■■□□□ 1.16
TUBB3-215ENST00000625617 PROSER2Q86WR7 435 aaPredicted RBP22.32■■□□□ 1.16
TUBB3-215ENST00000625617 ROCK1Q13464 1354 aa22.3■■□□□ 1.16
TUBB3-215ENST00000625617 PLEKHG1Q9ULL1 1385 aa22.3■■□□□ 1.16
TUBB3-215ENST00000625617 PPP1R15AO75807 674 aaPredicted RBP22.3■■□□□ 1.16
TUBB3-215ENST00000625617 RIMS2Q9UQ26 1411 aa22.3■■□□□ 1.16
TUBB3-215ENST00000625617 GCC2Q8IWJ2 1684 aa22.28■■□□□ 1.16
TUBB3-215ENST00000625617 RBM33Q96EV2 1170 aaKnown RBP22.27■■□□□ 1.16
TUBB3-215ENST00000625617 MSH6P52701 1360 aa22.26■■□□□ 1.15
TUBB3-215ENST00000625617 HDGFP51858 240 aaKnown RBP22.26■■□□□ 1.15
TUBB3-215ENST00000625617 TMEM131LA2VDJ0 1609 aa22.26■■□□□ 1.15
TUBB3-215ENST00000625617 CHGAP10645 457 aaKnown RBP22.24■■□□□ 1.15
TUBB3-215ENST00000625617 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
TUBB3-215ENST00000625617 ROBO1Q9Y6N7 1651 aa22.23■■□□□ 1.15
TUBB3-215ENST00000625617 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.22■■□□□ 1.15
TUBB3-215ENST00000625617 E9PCH4 1651 aa22.21■■□□□ 1.15
TUBB3-215ENST00000625617 NUP155O75694 1391 aa22.2■■□□□ 1.14
TUBB3-215ENST00000625617 MYO5BQ9ULV0 1848 aa22.19■■□□□ 1.14
TUBB3-215ENST00000625617 DIP2AQ14689 1571 aa22.18■■□□□ 1.14
TUBB3-215ENST00000625617 ITGAEP38570 1179 aa22.18■■□□□ 1.14
TUBB3-215ENST00000625617 TBX22Q9Y458 520 aa22.18■■□□□ 1.14
TUBB3-215ENST00000625617 ADAMTS13Q76LX8 1427 aa22.16■■□□□ 1.14
TUBB3-215ENST00000625617 NUTM2DQ5VT03 806 aaPredicted RBP22.15■■□□□ 1.14
TUBB3-215ENST00000625617 SLAIN2Q9P270 581 aa22.15■■□□□ 1.14
TUBB3-215ENST00000625617 RGS17Q9UGC6 210 aaPredicted RBP22.15■■□□□ 1.14
TUBB3-215ENST00000625617 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.14
TUBB3-215ENST00000625617 CHD2O14647 1828 aaKnown RBP22.14■■□□□ 1.13
TUBB3-215ENST00000625617 PIK3R4Q99570 1358 aa22.13■■□□□ 1.13
TUBB3-215ENST00000625617 C14orf37Q86TY3 774 aa22.13■■□□□ 1.13
TUBB3-215ENST00000625617 TRPM2O94759 1503 aa22.11■■□□□ 1.13
TUBB3-215ENST00000625617 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
TUBB3-215ENST00000625617 JCADQ9P266 1359 aa22.1■■□□□ 1.13
TUBB3-215ENST00000625617 PHLPP1O60346 1717 aa22.08■■□□□ 1.12
TUBB3-215ENST00000625617 CADPS2Q86UW7 1296 aa22.06■■□□□ 1.12
TUBB3-215ENST00000625617 ATF3P18847 181 aa22.05■■□□□ 1.12
TUBB3-215ENST00000625617 C19orf44Q9H6X5 657 aa22.05■■□□□ 1.12
TUBB3-215ENST00000625617 COL16A1Q07092 1604 aaPredicted RBP22.05■■□□□ 1.12
TUBB3-215ENST00000625617 POTEAQ6S8J7 498 aa22.04■■□□□ 1.12
TUBB3-215ENST00000625617 PTPRUQ92729 1446 aa22.04■■□□□ 1.12
TUBB3-215ENST00000625617 SPHKAPQ2M3C7 1700 aa22.03■■□□□ 1.12
TUBB3-215ENST00000625617 AMOTL2Q9Y2J4 779 aa22.03■■□□□ 1.12
TUBB3-215ENST00000625617 SETBP1Q9Y6X0 1596 aa22.03■■□□□ 1.12
TUBB3-215ENST00000625617 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.01■■□□□ 1.11
TUBB3-215ENST00000625617 ZNF326Q5BKZ1 582 aaKnown RBP22.01■■□□□ 1.11
TUBB3-215ENST00000625617 AHDC1Q5TGY3 1603 aaPredicted RBP22.01■■□□□ 1.11
TUBB3-215ENST00000625617 DCCP43146 1447 aa22■■□□□ 1.11
TUBB3-215ENST00000625617 RRBP1Q9P2E9 1410 aaKnown RBP22■■□□□ 1.11
TUBB3-215ENST00000625617 NRXN3Q9Y4C0 1643 aa22■■□□□ 1.11
TUBB3-215ENST00000625617 XRN1Q8IZH2 1706 aaKnown RBP21.99■■□□□ 1.11
TUBB3-215ENST00000625617 SPATA31A6Q5VVP1 1343 aa21.98■■□□□ 1.11
TUBB3-215ENST00000625617 LRP6O75581 1613 aa21.96■■□□□ 1.11
TUBB3-215ENST00000625617 CLTCL1P53675 1640 aa21.96■■□□□ 1.11
TUBB3-215ENST00000625617 NAIPQ13075 1403 aa21.96■■□□□ 1.11
TUBB3-215ENST00000625617 METP08581 1390 aa21.95■■□□□ 1.1
TUBB3-215ENST00000625617 BRINP3Q76B58 766 aa21.94■■□□□ 1.1
TUBB3-215ENST00000625617 NEXMIFQ5QGS0 1516 aa21.94■■□□□ 1.1
TUBB3-215ENST00000625617 MEX3CQ5U5Q3 659 aaKnown RBP21.93■■□□□ 1.1
TUBB3-215ENST00000625617 ASXL1Q8IXJ9 1541 aa21.92■■□□□ 1.1
TUBB3-215ENST00000625617 MST1RQ04912 1400 aa21.91■■□□□ 1.1
TUBB3-215ENST00000625617 SHPRHQ149N8 1683 aa21.91■■□□□ 1.1
TUBB3-215ENST00000625617 ADGRL3Q9HAR2 1447 aa21.9■■□□□ 1.1
TUBB3-215ENST00000625617 HFM1A2PYH4 1435 aa21.89■■□□□ 1.09
TUBB3-215ENST00000625617 ZNF772Q68DY9 489 aaPredicted RBP21.86■■□□□ 1.09
TUBB3-215ENST00000625617 TRIM52Q96A61 297 aa21.86■■□□□ 1.09
TUBB3-215ENST00000625617 SETD5Q9C0A6 1442 aa21.85■■□□□ 1.09
TUBB3-215ENST00000625617 SETD1AO15047 1707 aaKnown RBP21.85■■□□□ 1.09
TUBB3-215ENST00000625617 PTCH1Q13635 1447 aa21.84■■□□□ 1.09
TUBB3-215ENST00000625617 NHSL1Q5SYE7 1610 aa21.82■■□□□ 1.08
TUBB3-215ENST00000625617 NUTM2BA6NNL0 878 aaPredicted RBP21.82■■□□□ 1.08
TUBB3-215ENST00000625617 NUTM2EB1AL46 878 aaPredicted RBP21.82■■□□□ 1.08
TUBB3-215ENST00000625617 VGFO15240 615 aaPredicted RBP21.82■■□□□ 1.08
TUBB3-215ENST00000625617 NUTM2AQ8IVF1 878 aaPredicted RBP21.82■■□□□ 1.08
TUBB3-215ENST00000625617 NALCNQ8IZF0 1738 aa21.82■■□□□ 1.08
TUBB3-215ENST00000625617 KIF1BO60333 1816 aa21.82■■□□□ 1.08
TUBB3-215ENST00000625617 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
TUBB3-215ENST00000625617 PRAG1Q86YV5 1406 aa21.79■■□□□ 1.08
TUBB3-215ENST00000625617 RPGRIP1LQ68CZ1 1315 aa21.79■■□□□ 1.08
TUBB3-215ENST00000625617 ROBO2Q9HCK4 1378 aa21.78■■□□□ 1.08
TUBB3-215ENST00000625617 LRRC59Q96AG4 307 aaKnown RBP21.78■■□□□ 1.08
TUBB3-215ENST00000625617 C1orf167Q5SNV9 1468 aa21.77■■□□□ 1.08
TUBB3-215ENST00000625617 PNPLA6Q8IY17 1366 aa21.76■■□□□ 1.07
TUBB3-215ENST00000625617 DDX17Q92841 729 aaKnown RBP21.76■■□□□ 1.07
TUBB3-215ENST00000625617 AFF2P51816 1311 aa21.75■■□□□ 1.07
TUBB3-215ENST00000625617 RXRBP28702 533 aa21.73■■□□□ 1.07
TUBB3-215ENST00000625617 CDK12Q9NYV4 1490 aaPredicted RBP21.72■■□□□ 1.07
TUBB3-215ENST00000625617 CCDC144AA2RUR9 1427 aa21.71■■□□□ 1.07
TUBB3-215ENST00000625617 C8orf37Q96NL8 207 aa21.7■■□□□ 1.06
TUBB3-215ENST00000625617 PPLO60437 1756 aa21.69■■□□□ 1.06
TUBB3-215ENST00000625617 FOXD1Q16676 465 aa21.69■■□□□ 1.06
TUBB3-215ENST00000625617 LAMC1P11047 1609 aa21.69■■□□□ 1.06
TUBB3-215ENST00000625617 SOS2Q07890 1332 aaPredicted RBP21.67■■□□□ 1.06
TUBB3-215ENST00000625617 UPF1Q92900 1129 aaKnown RBP eCLIP21.67■■□□□ 1.06
TUBB3-215ENST00000625617 ORAI2Q96SN7 254 aa21.67■■□□□ 1.06
TUBB3-215ENST00000625617 CDC42BPGQ6DT37 1551 aa21.65■■□□□ 1.06
TUBB3-215ENST00000625617 SPATA31E1Q6ZUB1 1445 aa21.64■■□□□ 1.06
TUBB3-215ENST00000625617 ADGRF5Q8IZF2 1346 aa21.64■■□□□ 1.05
TUBB3-215ENST00000625617 ADAMTS2O95450 1211 aa21.64■■□□□ 1.05
TUBB3-215ENST00000625617 ANKRD30BQ9BXX2 1392 aa21.63■■□□□ 1.05
TUBB3-215ENST00000625617 RGS12O14924 1447 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms