RNA–Protein interactions for RNA: ENST00000625349.2

LUC7L3-223, Transcript of LUC7 like 3 pre-mRNA splicing factor, human

TSL 2 BASIC

Gene LUC7L3, Length 408 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LUC7L3-223	ENST00000625349	PROSER2	Q86WR7	435 aa	Predicted RBP	19.04	■□□□□ 0.64
LUC7L3-223	ENST00000625349	NWD1	Q149M9	1564 aa		19.02	■□□□□ 0.64
LUC7L3-223	ENST00000625349	RRBP1	Q9P2E9	1410 aa	Known RBP	19.02	■□□□□ 0.64
LUC7L3-223	ENST00000625349	PPARGC1B	Q86YN6	1023 aa	Known RBP	19.02	■□□□□ 0.64
LUC7L3-223	ENST00000625349	SETD1A	O15047	1707 aa	Known RBP	19.01	■□□□□ 0.63
LUC7L3-223	ENST00000625349	ANKRD50	Q9ULJ7	1429 aa		19	■□□□□ 0.63
LUC7L3-223	ENST00000625349	ZFYVE9	O95405	1425 aa		19	■□□□□ 0.63
LUC7L3-223	ENST00000625349	ROBO1	Q9Y6N7	1651 aa		18.99	■□□□□ 0.63
LUC7L3-223	ENST00000625349	MSH6	P52701	1360 aa		18.98	■□□□□ 0.63
LUC7L3-223	ENST00000625349	PLEKHG1	Q9ULL1	1385 aa		18.98	■□□□□ 0.63
LUC7L3-223	ENST00000625349	RBM33	Q96EV2	1170 aa	Known RBP	18.98	■□□□□ 0.63
LUC7L3-223	ENST00000625349	HDGF	P51858	240 aa	Known RBP	18.96	■□□□□ 0.63
LUC7L3-223	ENST00000625349	BCAN	Q96GW7	911 aa		18.96	■□□□□ 0.63
LUC7L3-223	ENST00000625349	FAM50A	Q14320	339 aa	Known RBP	18.95	■□□□□ 0.62
LUC7L3-223	ENST00000625349	SLAIN2	Q9P270	581 aa		18.95	■□□□□ 0.62
LUC7L3-223	ENST00000625349	RIMS2	Q9UQ26	1411 aa		18.94	■□□□□ 0.62
LUC7L3-223	ENST00000625349	SRCAP	Q6ZRS2	3230 aa		18.94	■□□□□ 0.62
LUC7L3-223	ENST00000625349	TMEM131L	A2VDJ0	1609 aa		18.93	■□□□□ 0.62
LUC7L3-223	ENST00000625349	NCOA3	Q9Y6Q9	1424 aa		18.93	■□□□□ 0.62
LUC7L3-223	ENST00000625349	TBX22	Q9Y458	520 aa		18.93	■□□□□ 0.62
LUC7L3-223	ENST00000625349	CHD2	O14647	1828 aa	Known RBP	18.93	■□□□□ 0.62
LUC7L3-223	ENST00000625349	MYO5B	Q9ULV0	1848 aa		18.93	■□□□□ 0.62
LUC7L3-223	ENST00000625349	PPP1R15A	O75807	674 aa	Predicted RBP	18.92	■□□□□ 0.62
LUC7L3-223	ENST00000625349	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
LUC7L3-223	ENST00000625349	GCC2	Q8IWJ2	1684 aa		18.9	■□□□□ 0.62
LUC7L3-223	ENST00000625349	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
LUC7L3-223	ENST00000625349	JCAD	Q9P266	1359 aa		18.9	■□□□□ 0.62
LUC7L3-223	ENST00000625349	UNC13B	O14795	1591 aa		18.89	■□□□□ 0.61
LUC7L3-223	ENST00000625349	PHLPP1	O60346	1717 aa		18.88	■□□□□ 0.61
LUC7L3-223	ENST00000625349	ROCK1	Q13464	1354 aa		18.87	■□□□□ 0.61
LUC7L3-223	ENST00000625349	ADAMTS13	Q76LX8	1427 aa		18.87	■□□□□ 0.61
LUC7L3-223	ENST00000625349	PIK3R4	Q99570	1358 aa		18.87	■□□□□ 0.61
LUC7L3-223	ENST00000625349	DIP2A	Q14689	1571 aa		18.86	■□□□□ 0.61
LUC7L3-223	ENST00000625349		E9PCH4	1651 aa		18.84	■□□□□ 0.61
LUC7L3-223	ENST00000625349	COL16A1	Q07092	1604 aa	Predicted RBP	18.84	■□□□□ 0.61
LUC7L3-223	ENST00000625349	CHGA	P10645	457 aa	Known RBP	18.83	■□□□□ 0.6
LUC7L3-223	ENST00000625349	CADPS2	Q86UW7	1296 aa		18.83	■□□□□ 0.6
LUC7L3-223	ENST00000625349	C19orf44	Q9H6X5	657 aa		18.83	■□□□□ 0.6
LUC7L3-223	ENST00000625349	IQGAP3	Q86VI3	1631 aa		18.82	■□□□□ 0.6
LUC7L3-223	ENST00000625349	C14orf37	Q86TY3	774 aa		18.82	■□□□□ 0.6
LUC7L3-223	ENST00000625349	SPATA31A6	Q5VVP1	1343 aa		18.81	■□□□□ 0.6
LUC7L3-223	ENST00000625349	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	18.8	■□□□□ 0.6
LUC7L3-223	ENST00000625349	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.79	■□□□□ 0.6
LUC7L3-223	ENST00000625349	ATF3	P18847	181 aa		18.79	■□□□□ 0.6
LUC7L3-223	ENST00000625349	NUTM2D	Q5VT03	806 aa	Predicted RBP	18.79	■□□□□ 0.6
LUC7L3-223	ENST00000625349	TRPM2	O94759	1503 aa		18.78	■□□□□ 0.6
LUC7L3-223	ENST00000625349	NUP155	O75694	1391 aa		18.78	■□□□□ 0.6
LUC7L3-223	ENST00000625349	LRP6	O75581	1613 aa		18.77	■□□□□ 0.6
LUC7L3-223	ENST00000625349	PTPRU	Q92729	1446 aa		18.76	■□□□□ 0.59
LUC7L3-223	ENST00000625349	HRC	P23327	699 aa		18.76	■□□□□ 0.59
LUC7L3-223	ENST00000625349	AMOTL2	Q9Y2J4	779 aa		18.76	■□□□□ 0.59
LUC7L3-223	ENST00000625349	DCC	P43146	1447 aa		18.75	■□□□□ 0.59
LUC7L3-223	ENST00000625349	SHPRH	Q149N8	1683 aa		18.74	■□□□□ 0.59
LUC7L3-223	ENST00000625349	ZNF772	Q68DY9	489 aa	Predicted RBP	18.74	■□□□□ 0.59
LUC7L3-223	ENST00000625349	ACIN1	Q9UKV3	1341 aa	Known RBP	18.74	■□□□□ 0.59
LUC7L3-223	ENST00000625349	BRINP3	Q76B58	766 aa		18.73	■□□□□ 0.59
LUC7L3-223	ENST00000625349	MEX3C	Q5U5Q3	659 aa	Known RBP	18.72	■□□□□ 0.59
LUC7L3-223	ENST00000625349	SETBP1	Q9Y6X0	1596 aa		18.72	■□□□□ 0.59
LUC7L3-223	ENST00000625349	XRN1	Q8IZH2	1706 aa	Known RBP	18.71	■□□□□ 0.59
LUC7L3-223	ENST00000625349	NRXN3	Q9Y4C0	1643 aa		18.71	■□□□□ 0.58
LUC7L3-223	ENST00000625349	TRIM52	Q96A61	297 aa		18.69	■□□□□ 0.58
LUC7L3-223	ENST00000625349	ASXL1	Q8IXJ9	1541 aa		18.68	■□□□□ 0.58
LUC7L3-223	ENST00000625349	SETD5	Q9C0A6	1442 aa		18.67	■□□□□ 0.58
LUC7L3-223	ENST00000625349	SPHKAP	Q2M3C7	1700 aa		18.67	■□□□□ 0.58
LUC7L3-223	ENST00000625349	ZEB1	P37275	1124 aa	Predicted RBP	18.67	■□□□□ 0.58
LUC7L3-223	ENST00000625349	MET	P08581	1390 aa		18.67	■□□□□ 0.58
LUC7L3-223	ENST00000625349	MST1R	Q04912	1400 aa		18.66	■□□□□ 0.58
LUC7L3-223	ENST00000625349	ITGAE	P38570	1179 aa		18.66	■□□□□ 0.58
LUC7L3-223	ENST00000625349	ZNF326	Q5BKZ1	582 aa	Known RBP	18.65	■□□□□ 0.58
LUC7L3-223	ENST00000625349	RXRB	P28702	533 aa		18.64	■□□□□ 0.57
LUC7L3-223	ENST00000625349	ADGRL3	Q9HAR2	1447 aa		18.64	■□□□□ 0.57
LUC7L3-223	ENST00000625349	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.64	■□□□□ 0.57
LUC7L3-223	ENST00000625349	NHSL1	Q5SYE7	1610 aa		18.63	■□□□□ 0.57
LUC7L3-223	ENST00000625349	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.62	■□□□□ 0.57
LUC7L3-223	ENST00000625349	NUTM2E	B1AL46	878 aa	Predicted RBP	18.62	■□□□□ 0.57
LUC7L3-223	ENST00000625349	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.62	■□□□□ 0.57
LUC7L3-223	ENST00000625349	LRRC59	Q96AG4	307 aa	Known RBP	18.62	■□□□□ 0.57
LUC7L3-223	ENST00000625349	NEXMIF	Q5QGS0	1516 aa		18.61	■□□□□ 0.57
LUC7L3-223	ENST00000625349	CLSPN	Q9HAW4	1339 aa		18.61	■□□□□ 0.57
LUC7L3-223	ENST00000625349	AFF2	P51816	1311 aa		18.6	■□□□□ 0.57
LUC7L3-223	ENST00000625349	CLTCL1	P53675	1640 aa		18.59	■□□□□ 0.57
LUC7L3-223	ENST00000625349	HFM1	A2PYH4	1435 aa		18.57	■□□□□ 0.56
LUC7L3-223	ENST00000625349	PNPLA6	Q8IY17	1366 aa		18.57	■□□□□ 0.56
LUC7L3-223	ENST00000625349	NALCN	Q8IZF0	1738 aa		18.56	■□□□□ 0.56
LUC7L3-223	ENST00000625349	PTCH1	Q13635	1447 aa		18.56	■□□□□ 0.56
LUC7L3-223	ENST00000625349	C1orf167	Q5SNV9	1468 aa		18.55	■□□□□ 0.56
LUC7L3-223	ENST00000625349	DDX17	Q92841	729 aa	Known RBP	18.54	■□□□□ 0.56
LUC7L3-223	ENST00000625349	NAIP	Q13075	1403 aa		18.54	■□□□□ 0.56
LUC7L3-223	ENST00000625349	PRAG1	Q86YV5	1406 aa		18.54	■□□□□ 0.56
LUC7L3-223	ENST00000625349	KIF1B	O60333	1816 aa		18.53	■□□□□ 0.56
LUC7L3-223	ENST00000625349	LAMC1	P11047	1609 aa		18.53	■□□□□ 0.56
LUC7L3-223	ENST00000625349	VGF	O15240	615 aa	Predicted RBP	18.53	■□□□□ 0.56
LUC7L3-223	ENST00000625349	C8orf37	Q96NL8	207 aa		18.53	■□□□□ 0.56
LUC7L3-223	ENST00000625349	RBM6	P78332	1123 aa	Known RBP	18.52	■□□□□ 0.56
LUC7L3-223	ENST00000625349	QTRT2	Q9H974	415 aa	Known RBP	18.52	■□□□□ 0.56
LUC7L3-223	ENST00000625349	ZRANB1	Q9UGI0	708 aa		18.52	■□□□□ 0.56
LUC7L3-223	ENST00000625349	ROBO2	Q9HCK4	1378 aa		18.51	■□□□□ 0.55
LUC7L3-223	ENST00000625349	SOS2	Q07890	1332 aa	Predicted RBP	18.5	■□□□□ 0.55
LUC7L3-223	ENST00000625349	RPGRIP1L	Q68CZ1	1315 aa		18.5	■□□□□ 0.55
LUC7L3-223	ENST00000625349	FOXD1	Q16676	465 aa		18.5	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms