RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ANKRD50Q9ULJ7 1429 aa17.22■□□□□ 0.35
DDX41-218ENST00000625286 ROBO1Q9Y6N7 1651 aa17.2■□□□□ 0.34
DDX41-218ENST00000625286 NWD1Q149M9 1564 aa17.2■□□□□ 0.34
DDX41-218ENST00000625286 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
DDX41-218ENST00000625286 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
DDX41-218ENST00000625286 POTEAQ6S8J7 498 aa17.18■□□□□ 0.34
DDX41-218ENST00000625286 CHD2O14647 1828 aaKnown RBP17.17■□□□□ 0.34
DDX41-218ENST00000625286 BCANQ96GW7 911 aa17.17■□□□□ 0.34
DDX41-218ENST00000625286 RIMS2Q9UQ26 1411 aa17.17■□□□□ 0.34
DDX41-218ENST00000625286 GCC2Q8IWJ2 1684 aa17.16■□□□□ 0.34
DDX41-218ENST00000625286 PLEKHG1Q9ULL1 1385 aa17.16■□□□□ 0.34
DDX41-218ENST00000625286 NUTM2DQ5VT03 806 aaPredicted RBP17.16■□□□□ 0.34
DDX41-218ENST00000625286 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
DDX41-218ENST00000625286 NKTRP30414 1462 aaKnown RBP17.16■□□□□ 0.34
DDX41-218ENST00000625286 E9PCH4 1651 aa17.13■□□□□ 0.33
DDX41-218ENST00000625286 TBX22Q9Y458 520 aa17.13■□□□□ 0.33
DDX41-218ENST00000625286 UNC13BO14795 1591 aa17.13■□□□□ 0.33
DDX41-218ENST00000625286 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
DDX41-218ENST00000625286 MSH6P52701 1360 aa17.12■□□□□ 0.33
DDX41-218ENST00000625286 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
DDX41-218ENST00000625286 CHGAP10645 457 aaKnown RBP17.1■□□□□ 0.33
DDX41-218ENST00000625286 PHLPP1O60346 1717 aa17.09■□□□□ 0.33
DDX41-218ENST00000625286 ROCK1Q13464 1354 aa17.08■□□□□ 0.32
DDX41-218ENST00000625286 PTPRUQ92729 1446 aa17.07■□□□□ 0.32
DDX41-218ENST00000625286 HDGFP51858 240 aaKnown RBP17.07■□□□□ 0.32
DDX41-218ENST00000625286 IQGAP3Q86VI3 1631 aa17.07■□□□□ 0.32
DDX41-218ENST00000625286 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDX41-218ENST00000625286 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
DDX41-218ENST00000625286 COL16A1Q07092 1604 aaPredicted RBP17.05■□□□□ 0.32
DDX41-218ENST00000625286 NCOA3Q9Y6Q9 1424 aa17.04■□□□□ 0.32
DDX41-218ENST00000625286 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.04■□□□□ 0.32
DDX41-218ENST00000625286 NUP155O75694 1391 aa17.04■□□□□ 0.32
DDX41-218ENST00000625286 JCADQ9P266 1359 aa17.04■□□□□ 0.32
DDX41-218ENST00000625286 ITGAEP38570 1179 aa17.04■□□□□ 0.32
DDX41-218ENST00000625286 C19orf44Q9H6X5 657 aa17.03■□□□□ 0.32
DDX41-218ENST00000625286 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
DDX41-218ENST00000625286 LRP6O75581 1613 aa17.03■□□□□ 0.32
DDX41-218ENST00000625286 PIK3R4Q99570 1358 aa17.01■□□□□ 0.31
DDX41-218ENST00000625286 NRXN3Q9Y4C0 1643 aa17■□□□□ 0.31
DDX41-218ENST00000625286 DIP2AQ14689 1571 aa17■□□□□ 0.31
DDX41-218ENST00000625286 C14orf37Q86TY3 774 aa17■□□□□ 0.31
DDX41-218ENST00000625286 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
DDX41-218ENST00000625286 BRINP3Q76B58 766 aa16.98■□□□□ 0.31
DDX41-218ENST00000625286 CADPS2Q86UW7 1296 aa16.98■□□□□ 0.31
DDX41-218ENST00000625286 AHDC1Q5TGY3 1603 aaPredicted RBP16.97■□□□□ 0.31
DDX41-218ENST00000625286 ATF3P18847 181 aa16.97■□□□□ 0.31
DDX41-218ENST00000625286 METP08581 1390 aa16.97■□□□□ 0.31
DDX41-218ENST00000625286 TRPM2O94759 1503 aa16.96■□□□□ 0.31
DDX41-218ENST00000625286 XRN1Q8IZH2 1706 aaKnown RBP16.95■□□□□ 0.3
DDX41-218ENST00000625286 SPATA31A6Q5VVP1 1343 aa16.95■□□□□ 0.3
DDX41-218ENST00000625286 SPHKAPQ2M3C7 1700 aa16.94■□□□□ 0.3
DDX41-218ENST00000625286 SETBP1Q9Y6X0 1596 aa16.94■□□□□ 0.3
DDX41-218ENST00000625286 SHPRHQ149N8 1683 aa16.93■□□□□ 0.3
DDX41-218ENST00000625286 MST1RQ04912 1400 aa16.91■□□□□ 0.3
DDX41-218ENST00000625286 ZNF326Q5BKZ1 582 aaKnown RBP16.91■□□□□ 0.3
DDX41-218ENST00000625286 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
DDX41-218ENST00000625286 CLTCL1P53675 1640 aa16.9■□□□□ 0.3
DDX41-218ENST00000625286 ASXL1Q8IXJ9 1541 aa16.9■□□□□ 0.3
DDX41-218ENST00000625286 DCCP43146 1447 aa16.89■□□□□ 0.29
DDX41-218ENST00000625286 NUTM2BA6NNL0 878 aaPredicted RBP16.89■□□□□ 0.29
DDX41-218ENST00000625286 NUTM2EB1AL46 878 aaPredicted RBP16.89■□□□□ 0.29
DDX41-218ENST00000625286 MEX3CQ5U5Q3 659 aaKnown RBP16.89■□□□□ 0.29
DDX41-218ENST00000625286 NUTM2AQ8IVF1 878 aaPredicted RBP16.89■□□□□ 0.29
DDX41-218ENST00000625286 NEXMIFQ5QGS0 1516 aa16.89■□□□□ 0.29
DDX41-218ENST00000625286 ZNF772Q68DY9 489 aaPredicted RBP16.87■□□□□ 0.29
DDX41-218ENST00000625286 UPF1Q92900 1129 aaKnown RBP eCLIP16.87■□□□□ 0.29
DDX41-218ENST00000625286 TRIM52Q96A61 297 aa16.87■□□□□ 0.29
DDX41-218ENST00000625286 NAIPQ13075 1403 aa16.87■□□□□ 0.29
DDX41-218ENST00000625286 SETD5Q9C0A6 1442 aa16.87■□□□□ 0.29
DDX41-218ENST00000625286 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
DDX41-218ENST00000625286 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
DDX41-218ENST00000625286 NALCNQ8IZF0 1738 aa16.84■□□□□ 0.29
DDX41-218ENST00000625286 RRBP1Q9P2E9 1410 aaKnown RBP16.83■□□□□ 0.28
DDX41-218ENST00000625286 AFF2P51816 1311 aa16.82■□□□□ 0.28
DDX41-218ENST00000625286 RXRBP28702 533 aa16.82■□□□□ 0.28
DDX41-218ENST00000625286 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
DDX41-218ENST00000625286 PNPLA6Q8IY17 1366 aa16.81■□□□□ 0.28
DDX41-218ENST00000625286 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
DDX41-218ENST00000625286 KIF1BO60333 1816 aa16.81■□□□□ 0.28
DDX41-218ENST00000625286 C1orf167Q5SNV9 1468 aa16.8■□□□□ 0.28
DDX41-218ENST00000625286 ORAI2Q96SN7 254 aa16.8■□□□□ 0.28
DDX41-218ENST00000625286 C8orf37Q96NL8 207 aa16.77■□□□□ 0.28
DDX41-218ENST00000625286 CDK12Q9NYV4 1490 aaPredicted RBP16.76■□□□□ 0.27
DDX41-218ENST00000625286 VGFO15240 615 aaPredicted RBP16.76■□□□□ 0.27
DDX41-218ENST00000625286 QTRT2Q9H974 415 aaKnown RBP16.76■□□□□ 0.27
DDX41-218ENST00000625286 LAMC1P11047 1609 aa16.76■□□□□ 0.27
DDX41-218ENST00000625286 PTCH1Q13635 1447 aa16.76■□□□□ 0.27
DDX41-218ENST00000625286 SOS2Q07890 1332 aaPredicted RBP16.75■□□□□ 0.27
DDX41-218ENST00000625286 FOXD1Q16676 465 aa16.75■□□□□ 0.27
DDX41-218ENST00000625286 HFM1A2PYH4 1435 aa16.74■□□□□ 0.27
DDX41-218ENST00000625286 RGS12O14924 1447 aa16.74■□□□□ 0.27
DDX41-218ENST00000625286 PPLO60437 1756 aa16.74■□□□□ 0.27
DDX41-218ENST00000625286 PRAG1Q86YV5 1406 aa16.73■□□□□ 0.27
DDX41-218ENST00000625286 ADAMTS2O95450 1211 aa16.73■□□□□ 0.27
DDX41-218ENST00000625286 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
DDX41-218ENST00000625286 RPGRIP1LQ68CZ1 1315 aa16.72■□□□□ 0.27
DDX41-218ENST00000625286 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
DDX41-218ENST00000625286 ADGRF5Q8IZF2 1346 aa16.7■□□□□ 0.26
DDX41-218ENST00000625286 SRCAPQ6ZRS2 3230 aa16.7■□□□□ 0.26
DDX41-218ENST00000625286 NGLY1Q96IV0 654 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms