RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 PPP1R15AO75807 674 aaPredicted RBP29.21■■■□□ 2.27
SMN1-211ENST00000625245 CHGAP10645 457 aaKnown RBP29.2■■■□□ 2.26
SMN1-211ENST00000625245 GCC2Q8IWJ2 1684 aa29.19■■■□□ 2.26
SMN1-211ENST00000625245 HDGFP51858 240 aaKnown RBP29.19■■■□□ 2.26
SMN1-211ENST00000625245 FAM135BQ49AJ0 1406 aa29.19■■■□□ 2.26
SMN1-211ENST00000625245 RIMS2Q9UQ26 1411 aa29.17■■■□□ 2.26
SMN1-211ENST00000625245 UNC13BO14795 1591 aa29.15■■■□□ 2.26
SMN1-211ENST00000625245 ZFYVE9O95405 1425 aa29.14■■■□□ 2.26
SMN1-211ENST00000625245 TMEM131LA2VDJ0 1609 aa29.14■■■□□ 2.26
SMN1-211ENST00000625245 ITGAEP38570 1179 aa29.14■■■□□ 2.26
SMN1-211ENST00000625245 NKTRP30414 1462 aaKnown RBP29.14■■■□□ 2.26
SMN1-211ENST00000625245 PLEKHG1Q9ULL1 1385 aa29.13■■■□□ 2.25
SMN1-211ENST00000625245 NWD1Q149M9 1564 aa29.13■■■□□ 2.25
SMN1-211ENST00000625245 ROBO1Q9Y6N7 1651 aa29.12■■■□□ 2.25
SMN1-211ENST00000625245 MSH6P52701 1360 aa29.12■■■□□ 2.25
SMN1-211ENST00000625245 NUTM2DQ5VT03 806 aaPredicted RBP29.11■■■□□ 2.25
SMN1-211ENST00000625245 E9PCH4 1651 aa29.11■■■□□ 2.25
SMN1-211ENST00000625245 ROCK1Q13464 1354 aa29.11■■■□□ 2.25
SMN1-211ENST00000625245 CHD2O14647 1828 aaKnown RBP29.1■■■□□ 2.25
SMN1-211ENST00000625245 PPARGC1BQ86YN6 1023 aaKnown RBP29.1■■■□□ 2.25
SMN1-211ENST00000625245 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.09■■■□□ 2.25
SMN1-211ENST00000625245 RGS17Q9UGC6 210 aaPredicted RBP29.07■■■□□ 2.24
SMN1-211ENST00000625245 NUP155O75694 1391 aa29.06■■■□□ 2.24
SMN1-211ENST00000625245 SLAIN2Q9P270 581 aa29.06■■■□□ 2.24
SMN1-211ENST00000625245 TBX22Q9Y458 520 aa29.06■■■□□ 2.24
SMN1-211ENST00000625245 IQGAP3Q86VI3 1631 aa29.05■■■□□ 2.24
SMN1-211ENST00000625245 C14orf37Q86TY3 774 aa29.02■■■□□ 2.24
SMN1-211ENST00000625245 PHLPP1O60346 1717 aa28.97■■■□□ 2.23
SMN1-211ENST00000625245 ADAMTS13Q76LX8 1427 aa28.97■■■□□ 2.23
SMN1-211ENST00000625245 DIP2AQ14689 1571 aa28.92■■■□□ 2.22
SMN1-211ENST00000625245 POTEAQ6S8J7 498 aa28.92■■■□□ 2.22
SMN1-211ENST00000625245 NCOA3Q9Y6Q9 1424 aa28.92■■■□□ 2.22
SMN1-211ENST00000625245 PIK3R4Q99570 1358 aa28.9■■■□□ 2.22
SMN1-211ENST00000625245 ATF3P18847 181 aa28.9■■■□□ 2.22
SMN1-211ENST00000625245 C19orf44Q9H6X5 657 aa28.89■■■□□ 2.22
SMN1-211ENST00000625245 AMOTL2Q9Y2J4 779 aa28.89■■■□□ 2.22
SMN1-211ENST00000625245 JCADQ9P266 1359 aa28.88■■■□□ 2.21
SMN1-211ENST00000625245 ZNF326Q5BKZ1 582 aaKnown RBP28.88■■■□□ 2.21
SMN1-211ENST00000625245 CADPS2Q86UW7 1296 aa28.88■■■□□ 2.21
SMN1-211ENST00000625245 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.88■■■□□ 2.21
SMN1-211ENST00000625245 TRPM2O94759 1503 aa28.88■■■□□ 2.21
SMN1-211ENST00000625245 SPHKAPQ2M3C7 1700 aa28.86■■■□□ 2.21
SMN1-211ENST00000625245 PTPRUQ92729 1446 aa28.84■■■□□ 2.21
SMN1-211ENST00000625245 COL16A1Q07092 1604 aaPredicted RBP28.83■■■□□ 2.21
SMN1-211ENST00000625245 NRXN3Q9Y4C0 1643 aa28.77■■■□□ 2.2
SMN1-211ENST00000625245 MEX3CQ5U5Q3 659 aaKnown RBP28.76■■■□□ 2.19
SMN1-211ENST00000625245 SETBP1Q9Y6X0 1596 aa28.75■■■□□ 2.19
SMN1-211ENST00000625245 SPATA31A6Q5VVP1 1343 aa28.73■■■□□ 2.19
SMN1-211ENST00000625245 AHDC1Q5TGY3 1603 aaPredicted RBP28.73■■■□□ 2.19
SMN1-211ENST00000625245 BRINP3Q76B58 766 aa28.73■■■□□ 2.19
SMN1-211ENST00000625245 XRN1Q8IZH2 1706 aaKnown RBP28.72■■■□□ 2.19
SMN1-211ENST00000625245 METP08581 1390 aa28.72■■■□□ 2.19
SMN1-211ENST00000625245 CLTCL1P53675 1640 aa28.72■■■□□ 2.19
SMN1-211ENST00000625245 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.19
SMN1-211ENST00000625245 LRP6O75581 1613 aa28.7■■■□□ 2.19
SMN1-211ENST00000625245 TRIM52Q96A61 297 aa28.7■■■□□ 2.18
SMN1-211ENST00000625245 KIF1BO60333 1816 aa28.7■■■□□ 2.18
SMN1-211ENST00000625245 NAIPQ13075 1403 aa28.69■■■□□ 2.18
SMN1-211ENST00000625245 DCCP43146 1447 aa28.68■■■□□ 2.18
SMN1-211ENST00000625245 SHPRHQ149N8 1683 aa28.67■■■□□ 2.18
SMN1-211ENST00000625245 NEXMIFQ5QGS0 1516 aa28.67■■■□□ 2.18
SMN1-211ENST00000625245 SETD1AO15047 1707 aaKnown RBP28.66■■■□□ 2.18
SMN1-211ENST00000625245 NUTM2BA6NNL0 878 aaPredicted RBP28.66■■■□□ 2.18
SMN1-211ENST00000625245 NUTM2EB1AL46 878 aaPredicted RBP28.66■■■□□ 2.18
SMN1-211ENST00000625245 NUTM2AQ8IVF1 878 aaPredicted RBP28.66■■■□□ 2.18
SMN1-211ENST00000625245 ZNF772Q68DY9 489 aaPredicted RBP28.64■■■□□ 2.18
SMN1-211ENST00000625245 MST1RQ04912 1400 aa28.63■■■□□ 2.17
SMN1-211ENST00000625245 ASXL1Q8IXJ9 1541 aa28.63■■■□□ 2.17
SMN1-211ENST00000625245 ADGRL3Q9HAR2 1447 aa28.59■■■□□ 2.17
SMN1-211ENST00000625245 VGFO15240 615 aaPredicted RBP28.58■■■□□ 2.17
SMN1-211ENST00000625245 SLC4A1APQ9BWU0 796 aaKnown RBP28.58■■■□□ 2.17
SMN1-211ENST00000625245 DDX17Q92841 729 aaKnown RBP28.57■■■□□ 2.16
SMN1-211ENST00000625245 NHSL1Q5SYE7 1610 aa28.56■■■□□ 2.16
SMN1-211ENST00000625245 NALCNQ8IZF0 1738 aa28.56■■■□□ 2.16
SMN1-211ENST00000625245 LRRC59Q96AG4 307 aaKnown RBP28.56■■■□□ 2.16
SMN1-211ENST00000625245 SETD5Q9C0A6 1442 aa28.55■■■□□ 2.16
SMN1-211ENST00000625245 HFM1A2PYH4 1435 aa28.53■■■□□ 2.16
SMN1-211ENST00000625245 RPGRIP1LQ68CZ1 1315 aa28.51■■■□□ 2.15
SMN1-211ENST00000625245 RXRBP28702 533 aa28.51■■■□□ 2.15
SMN1-211ENST00000625245 AFF2P51816 1311 aa28.49■■■□□ 2.15
SMN1-211ENST00000625245 ROBO2Q9HCK4 1378 aa28.49■■■□□ 2.15
SMN1-211ENST00000625245 C1orf167Q5SNV9 1468 aa28.47■■■□□ 2.15
SMN1-211ENST00000625245 FOXD1Q16676 465 aa28.47■■■□□ 2.15
SMN1-211ENST00000625245 PTCH1Q13635 1447 aa28.46■■■□□ 2.15
SMN1-211ENST00000625245 C8orf37Q96NL8 207 aa28.46■■■□□ 2.15
SMN1-211ENST00000625245 PPLO60437 1756 aa28.46■■■□□ 2.15
SMN1-211ENST00000625245 PNPLA6Q8IY17 1366 aa28.45■■■□□ 2.14
SMN1-211ENST00000625245 ORAI2Q96SN7 254 aa28.44■■■□□ 2.14
SMN1-211ENST00000625245 UPF1Q92900 1129 aaKnown RBP eCLIP28.42■■■□□ 2.14
SMN1-211ENST00000625245 ADAMTS2O95450 1211 aa28.39■■■□□ 2.14
SMN1-211ENST00000625245 RGL3Q3MIN7 710 aa28.39■■■□□ 2.14
SMN1-211ENST00000625245 QTRT2Q9H974 415 aaKnown RBP28.38■■■□□ 2.13
SMN1-211ENST00000625245 NGLY1Q96IV0 654 aa28.37■■■□□ 2.13
SMN1-211ENST00000625245 ADGRF5Q8IZF2 1346 aa28.36■■■□□ 2.13
SMN1-211ENST00000625245 SOS2Q07890 1332 aaPredicted RBP28.35■■■□□ 2.13
SMN1-211ENST00000625245 CCDC144AA2RUR9 1427 aa28.35■■■□□ 2.13
SMN1-211ENST00000625245 PRAG1Q86YV5 1406 aa28.35■■■□□ 2.13
SMN1-211ENST00000625245 CDK12Q9NYV4 1490 aaPredicted RBP28.34■■■□□ 2.13
SMN1-211ENST00000625245 STK26Q9P289 416 aa28.34■■■□□ 2.13
SMN1-211ENST00000625245 LAMC1P11047 1609 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms