RNA–Protein interactions for RNA: ENST00000624390.1

LINC00963-219, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 472 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-219ENST00000624390 RGL3Q3MIN7 710 aa12.31□□□□□ -0.44
LINC00963-219ENST00000624390 FBXO41Q8TF61 875 aa12.31□□□□□ -0.44
LINC00963-219ENST00000624390 NEURL4Q96JN8 1562 aa12.3□□□□□ -0.44
LINC00963-219ENST00000624390 TRIM26Q12899 539 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-219ENST00000624390 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
LINC00963-219ENST00000624390 ZFYVE9O95405 1425 aa12.28□□□□□ -0.44
LINC00963-219ENST00000624390 PLEKHG1Q9ULL1 1385 aa12.27□□□□□ -0.45
LINC00963-219ENST00000624390 TRPM2O94759 1503 aa12.27□□□□□ -0.45
LINC00963-219ENST00000624390 TMEM131LA2VDJ0 1609 aa12.26□□□□□ -0.45
LINC00963-219ENST00000624390 UBAP1LF5GYI3 381 aa12.26□□□□□ -0.45
LINC00963-219ENST00000624390 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
LINC00963-219ENST00000624390 KCNA6P17658 529 aa12.26□□□□□ -0.45
LINC00963-219ENST00000624390 TBX22Q9Y458 520 aa12.26□□□□□ -0.45
LINC00963-219ENST00000624390 RPGRIP1LQ68CZ1 1315 aa12.26□□□□□ -0.45
LINC00963-219ENST00000624390 LTBP4Q8N2S1 1624 aa12.26□□□□□ -0.45
LINC00963-219ENST00000624390 PROSER2Q86WR7 435 aaPredicted RBP12.25□□□□□ -0.45
LINC00963-219ENST00000624390 IQGAP1P46940 1657 aa12.25□□□□□ -0.45
LINC00963-219ENST00000624390 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
LINC00963-219ENST00000624390 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
LINC00963-219ENST00000624390 SPHKAPQ2M3C7 1700 aa12.23□□□□□ -0.45
LINC00963-219ENST00000624390 KDM5AP29375 1690 aaKnown RBP12.23□□□□□ -0.45
LINC00963-219ENST00000624390 CLTCL1P53675 1640 aa12.23□□□□□ -0.45
LINC00963-219ENST00000624390 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
LINC00963-219ENST00000624390 TOM1O60784 492 aa12.22□□□□□ -0.45
LINC00963-219ENST00000624390 PIP4K2BP78356 416 aa12.21□□□□□ -0.45
LINC00963-219ENST00000624390 AMOTL2Q9Y2J4 779 aa12.21□□□□□ -0.45
LINC00963-219ENST00000624390 CPS1P31327 1500 aa12.21□□□□□ -0.46
LINC00963-219ENST00000624390 ANKRD30BQ9BXX2 1392 aa12.2□□□□□ -0.46
LINC00963-219ENST00000624390 C14orf37Q86TY3 774 aa12.2□□□□□ -0.46
LINC00963-219ENST00000624390 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
LINC00963-219ENST00000624390 ADGRF5Q8IZF2 1346 aa12.19□□□□□ -0.46
LINC00963-219ENST00000624390 KDM2AQ9Y2K7 1162 aa12.19□□□□□ -0.46
LINC00963-219ENST00000624390 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
LINC00963-219ENST00000624390 LRRC7Q96NW7 1537 aa12.17□□□□□ -0.46
LINC00963-219ENST00000624390 IQSEC2Q5JU85 1478 aa12.17□□□□□ -0.46
LINC00963-219ENST00000624390 MYO5BQ9ULV0 1848 aa12.17□□□□□ -0.46
LINC00963-219ENST00000624390 DCAF11Q8TEB1 546 aa12.17□□□□□ -0.46
LINC00963-219ENST00000624390 SPATA31E1Q6ZUB1 1445 aa12.17□□□□□ -0.46
LINC00963-219ENST00000624390 METP08581 1390 aa12.17□□□□□ -0.46
LINC00963-219ENST00000624390 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
LINC00963-219ENST00000624390 PIK3R4Q99570 1358 aa12.16□□□□□ -0.46
LINC00963-219ENST00000624390 NEXMIFQ5QGS0 1516 aa12.16□□□□□ -0.46
LINC00963-219ENST00000624390 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
LINC00963-219ENST00000624390 PCGF6Q9BYE7 350 aa12.15□□□□□ -0.46
LINC00963-219ENST00000624390 KIF1BO60333 1816 aa12.14□□□□□ -0.47
LINC00963-219ENST00000624390 STK26Q9P289 416 aa12.14□□□□□ -0.47
LINC00963-219ENST00000624390 PTPRUQ92729 1446 aa12.13□□□□□ -0.47
LINC00963-219ENST00000624390 TMEM132EQ6IEE7 984 aa12.13□□□□□ -0.47
LINC00963-219ENST00000624390 SIN3AQ96ST3 1273 aa12.13□□□□□ -0.47
LINC00963-219ENST00000624390 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
LINC00963-219ENST00000624390 MSH6P52701 1360 aa12.12□□□□□ -0.47
LINC00963-219ENST00000624390 SETBP1Q9Y6X0 1596 aa12.11□□□□□ -0.47
LINC00963-219ENST00000624390 ATF3P18847 181 aa12.11□□□□□ -0.47
LINC00963-219ENST00000624390 C19orf44Q9H6X5 657 aa12.11□□□□□ -0.47
LINC00963-219ENST00000624390 STRCP1A6NGW2 1772 aa12.1□□□□□ -0.47
LINC00963-219ENST00000624390 DIP2AQ14689 1571 aa12.1□□□□□ -0.47
LINC00963-219ENST00000624390 NKTRP30414 1462 aaKnown RBP12.1□□□□□ -0.47
LINC00963-219ENST00000624390 C14orf93Q9H972 538 aaKnown RBP12.1□□□□□ -0.47
LINC00963-219ENST00000624390 HSPA1LP34931 641 aa12.09□□□□□ -0.47
LINC00963-219ENST00000624390 STAC3Q96MF2 364 aa12.09□□□□□ -0.47
LINC00963-219ENST00000624390 SLAIN2Q9P270 581 aa12.09□□□□□ -0.47
LINC00963-219ENST00000624390 DHX57Q6P158 1386 aaKnown RBP12.08□□□□□ -0.48
LINC00963-219ENST00000624390 CADPS2Q86UW7 1296 aa12.08□□□□□ -0.48
LINC00963-219ENST00000624390 ALKQ9UM73 1620 aa12.08□□□□□ -0.48
LINC00963-219ENST00000624390 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
LINC00963-219ENST00000624390 WAPLQ7Z5K2 1190 aa12.07□□□□□ -0.48
LINC00963-219ENST00000624390 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
LINC00963-219ENST00000624390 NRXN3Q9Y4C0 1643 aa12.07□□□□□ -0.48
LINC00963-219ENST00000624390 PIK3C2GO75747 1445 aa12.06□□□□□ -0.48
LINC00963-219ENST00000624390 L3MBTL2Q969R5 705 aa12.06□□□□□ -0.48
LINC00963-219ENST00000624390 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
LINC00963-219ENST00000624390 LRPPRCP42704 1394 aaKnown RBP12.05□□□□□ -0.48
LINC00963-219ENST00000624390 MYOM2P54296 1465 aa12.04□□□□□ -0.48
LINC00963-219ENST00000624390 SAFB2Q14151 953 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC00963-219ENST00000624390 POGKQ9P215 609 aa12.04□□□□□ -0.48
LINC00963-219ENST00000624390 TRAK1Q9UPV9 953 aa12.04□□□□□ -0.48
LINC00963-219ENST00000624390 PPLO60437 1756 aa12.04□□□□□ -0.48
LINC00963-219ENST00000624390 CHD2O14647 1828 aaKnown RBP12.04□□□□□ -0.48
LINC00963-219ENST00000624390 ABCC11Q96J66 1382 aa12.03□□□□□ -0.48
LINC00963-219ENST00000624390 YTHDC2Q9H6S0 1430 aaKnown RBP12.03□□□□□ -0.48
LINC00963-219ENST00000624390 PRAM1Q96QH2 718 aa12.02□□□□□ -0.49
LINC00963-219ENST00000624390 FAM135BQ49AJ0 1406 aa12.02□□□□□ -0.49
LINC00963-219ENST00000624390 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.49
LINC00963-219ENST00000624390 SIRT1Q96EB6 747 aa12.01□□□□□ -0.49
LINC00963-219ENST00000624390 PTCH1Q13635 1447 aa12.01□□□□□ -0.49
LINC00963-219ENST00000624390 NUTM2FA1L443 756 aa12□□□□□ -0.49
LINC00963-219ENST00000624390 NBPF1Q3BBV0 1214 aa12□□□□□ -0.49
LINC00963-219ENST00000624390 PLEKHH1Q9ULM0 1364 aa12□□□□□ -0.49
LINC00963-219ENST00000624390 BRINP3Q76B58 766 aa11.99□□□□□ -0.49
LINC00963-219ENST00000624390 ADGRL3Q9HAR2 1447 aa11.99□□□□□ -0.49
LINC00963-219ENST00000624390 XRN1Q8IZH2 1706 aaKnown RBP11.98□□□□□ -0.49
LINC00963-219ENST00000624390 TONSLQ96HA7 1378 aa11.98□□□□□ -0.49
LINC00963-219ENST00000624390 ESCO1Q5FWF5 840 aa11.97□□□□□ -0.49
LINC00963-219ENST00000624390 CCER1Q8TC90 406 aaPredicted RBP11.97□□□□□ -0.49
LINC00963-219ENST00000624390 ORAI2Q96SN7 254 aa11.97□□□□□ -0.49
LINC00963-219ENST00000624390 HIRIP3Q9BW71 556 aaPredicted RBP11.97□□□□□ -0.49
LINC00963-219ENST00000624390 XIRP1Q702N8 1843 aaKnown RBP11.97□□□□□ -0.49
LINC00963-219ENST00000624390 IFT172Q9UG01 1749 aa11.97□□□□□ -0.49
LINC00963-219ENST00000624390 ASXL1Q8IXJ9 1541 aa11.96□□□□□ -0.49
LINC00963-219ENST00000624390 TECPR2O15040 1411 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms