RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 PDE4DQ08499 809 aa11.38□□□□□ -0.59
CDKL5-206ENST00000623610 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
CDKL5-206ENST00000623610 STK24Q9Y6E0 443 aa11.38□□□□□ -0.59
CDKL5-206ENST00000623610 RBM47A0AV96 593 aaKnown RBP11.37□□□□□ -0.59
CDKL5-206ENST00000623610 SND1Q7KZF4 910 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDKL5-206ENST00000623610 KLHL42Q9P2K6 505 aa11.37□□□□□ -0.59
CDKL5-206ENST00000623610 MCM6Q14566 821 aa11.36□□□□□ -0.59
CDKL5-206ENST00000623610 RINLQ6ZS11 566 aa11.36□□□□□ -0.59
CDKL5-206ENST00000623610 CADPS2Q86UW7 1296 aa11.36□□□□□ -0.59
CDKL5-206ENST00000623610 PLSCR2Q9NRY7 297 aa11.36□□□□□ -0.59
CDKL5-206ENST00000623610 IVNS1ABPQ9Y6Y0 642 aa11.36□□□□□ -0.59
CDKL5-206ENST00000623610 MCCD1P59942 119 aaPredicted RBP11.35□□□□□ -0.59
CDKL5-206ENST00000623610 MORC4Q8TE76 937 aa11.35□□□□□ -0.59
CDKL5-206ENST00000623610 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
CDKL5-206ENST00000623610 CYB5RLQ6IPT4 315 aa11.35□□□□□ -0.59
CDKL5-206ENST00000623610 MTA3Q9BTC8 594 aa11.35□□□□□ -0.59
CDKL5-206ENST00000623610 CARNS1A5YM72 827 aa11.34□□□□□ -0.59
CDKL5-206ENST00000623610 VTI1AQ96AJ9 217 aa11.34□□□□□ -0.59
CDKL5-206ENST00000623610 CAPN15O75808 1086 aa11.33□□□□□ -0.6
CDKL5-206ENST00000623610 ERCC3P19447 782 aa11.33□□□□□ -0.6
CDKL5-206ENST00000623610 ARAP1Q96P48 1450 aa11.33□□□□□ -0.6
CDKL5-206ENST00000623610 LONRF3Q496Y0 759 aa11.33□□□□□ -0.6
CDKL5-206ENST00000623610 CLGNO14967 610 aa11.32□□□□□ -0.6
CDKL5-206ENST00000623610 TRIM66O15016 1216 aa11.32□□□□□ -0.6
CDKL5-206ENST00000623610 TSR1Q2NL82 804 aaKnown RBP11.32□□□□□ -0.6
CDKL5-206ENST00000623610 CDCA8Q53HL2 280 aa11.32□□□□□ -0.6
CDKL5-206ENST00000623610 ERCC6L2Q5T890 1561 aa11.32□□□□□ -0.6
CDKL5-206ENST00000623610 TSHZ1Q6ZSZ6 1077 aa11.32□□□□□ -0.6
CDKL5-206ENST00000623610 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
CDKL5-206ENST00000623610 RAPGEF2Q9Y4G8 1499 aa11.32□□□□□ -0.6
CDKL5-206ENST00000623610 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
CDKL5-206ENST00000623610 MYBPC2Q14324 1141 aa11.32□□□□□ -0.6
CDKL5-206ENST00000623610 SHROOM2Q13796 1616 aa11.31□□□□□ -0.6
CDKL5-206ENST00000623610 CCER2I3L3R5 266 aa11.31□□□□□ -0.6
CDKL5-206ENST00000623610 GPATCH3Q96I76 525 aa11.31□□□□□ -0.6
CDKL5-206ENST00000623610 JPH4Q96JJ6 628 aa11.31□□□□□ -0.6
CDKL5-206ENST00000623610 ABCB7O75027 752 aa11.3□□□□□ -0.6
CDKL5-206ENST00000623610 KRBA2Q6ZNG9 492 aa11.3□□□□□ -0.6
CDKL5-206ENST00000623610 ZNF622Q969S3 477 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDKL5-206ENST00000623610 TCF3P15923 654 aa11.3□□□□□ -0.6
CDKL5-206ENST00000623610 PCGF6Q9BYE7 350 aa11.3□□□□□ -0.6
CDKL5-206ENST00000623610 PNMA2Q9UL42 364 aa11.3□□□□□ -0.6
CDKL5-206ENST00000623610 KIAA0586Q9BVV6 1533 aa11.3□□□□□ -0.6
CDKL5-206ENST00000623610 SKIV2LQ15477 1246 aaKnown RBP11.29□□□□□ -0.6
CDKL5-206ENST00000623610 UBXN4Q92575 508 aa11.29□□□□□ -0.6
CDKL5-206ENST00000623610 UBA5Q9GZZ9 404 aa11.29□□□□□ -0.6
CDKL5-206ENST00000623610 PAX3P23760 479 aa11.29□□□□□ -0.6
CDKL5-206ENST00000623610 PRXQ9BXM0 1461 aa11.29□□□□□ -0.6
CDKL5-206ENST00000623610 PRG4Q92954 1404 aaPredicted RBP11.28□□□□□ -0.6
CDKL5-206ENST00000623610 CREB3O43889 395 aa11.28□□□□□ -0.6
CDKL5-206ENST00000623610 TXNDC2Q86VQ3 553 aa11.28□□□□□ -0.6
CDKL5-206ENST00000623610 ZFYVE27Q5T4F4 411 aa11.27□□□□□ -0.61
CDKL5-206ENST00000623610 PLCD3Q8N3E9 789 aa11.27□□□□□ -0.61
CDKL5-206ENST00000623610 EEA1Q15075 1411 aa11.26□□□□□ -0.61
CDKL5-206ENST00000623610 C8orf37Q96NL8 207 aa11.26□□□□□ -0.61
CDKL5-206ENST00000623610 PARNO95453 639 aaKnown RBP11.26□□□□□ -0.61
CDKL5-206ENST00000623610 RTL5Q5HYW3 569 aaPredicted RBP11.26□□□□□ -0.61
CDKL5-206ENST00000623610 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
CDKL5-206ENST00000623610 SOX12O15370 315 aa11.25□□□□□ -0.61
CDKL5-206ENST00000623610 RBM46Q8TBY0 533 aaKnown RBP11.25□□□□□ -0.61
CDKL5-206ENST00000623610 IQGAP2Q13576 1575 aa11.25□□□□□ -0.61
CDKL5-206ENST00000623610 SMC5Q8IY18 1101 aa11.24□□□□□ -0.61
CDKL5-206ENST00000623610 PMM1Q92871 262 aa11.24□□□□□ -0.61
CDKL5-206ENST00000623610 SH3BP5O60239 455 aa11.23□□□□□ -0.61
CDKL5-206ENST00000623610 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDKL5-206ENST00000623610 PPP1R15AO75807 674 aaPredicted RBP11.23□□□□□ -0.61
CDKL5-206ENST00000623610 KIF4AO95239 1232 aa11.23□□□□□ -0.61
CDKL5-206ENST00000623610 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
CDKL5-206ENST00000623610 APLP1P51693 650 aa11.22□□□□□ -0.61
CDKL5-206ENST00000623610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDKL5-206ENST00000623610 CTTNBP2Q8WZ74 1663 aa11.22□□□□□ -0.61
CDKL5-206ENST00000623610 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.61
CDKL5-206ENST00000623610 MIER1Q8N108 512 aa11.21□□□□□ -0.61
CDKL5-206ENST00000623610 CLEC4GQ6UXB4 293 aa11.21□□□□□ -0.62
CDKL5-206ENST00000623610 SDR16C5Q8N3Y7 309 aa11.21□□□□□ -0.62
CDKL5-206ENST00000623610 CCDC194A0A1B0GVG4 234 aa11.2□□□□□ -0.62
CDKL5-206ENST00000623610 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
CDKL5-206ENST00000623610 STAG3Q9UJ98 1225 aa11.2□□□□□ -0.62
CDKL5-206ENST00000623610 CCDC96Q2M329 555 aa11.2□□□□□ -0.62
CDKL5-206ENST00000623610 DPH6Q7L8W6 267 aa11.19□□□□□ -0.62
CDKL5-206ENST00000623610 STAC3Q96MF2 364 aa11.19□□□□□ -0.62
CDKL5-206ENST00000623610 SPOCK3Q9BQ16 436 aa11.19□□□□□ -0.62
CDKL5-206ENST00000623610 ACIN1Q9UKV3 1341 aaKnown RBP11.19□□□□□ -0.62
CDKL5-206ENST00000623610 SSFA2P28290 1259 aa11.18□□□□□ -0.62
CDKL5-206ENST00000623610 ARID4AP29374 1257 aaPredicted RBP11.18□□□□□ -0.62
CDKL5-206ENST00000623610 HMGB1P1B2RPK0 211 aaPredicted RBP11.18□□□□□ -0.62
CDKL5-206ENST00000623610 CNGB1Q14028 1251 aaPredicted RBP11.18□□□□□ -0.62
CDKL5-206ENST00000623610 METTL14Q9HCE5 456 aaKnown RBP11.18□□□□□ -0.62
CDKL5-206ENST00000623610 MAGEC2Q9UBF1 373 aaPredicted RBP11.18□□□□□ -0.62
CDKL5-206ENST00000623610 SH3BP1Q9Y3L3 701 aa11.18□□□□□ -0.62
CDKL5-206ENST00000623610 SBNO2Q9Y2G9 1366 aa11.18□□□□□ -0.62
CDKL5-206ENST00000623610 DISP1Q96F81 1524 aa11.18□□□□□ -0.62
CDKL5-206ENST00000623610 TTC36A6NLP5 189 aa11.17□□□□□ -0.62
CDKL5-206ENST00000623610 MAF1Q9H063 256 aa11.17□□□□□ -0.62
CDKL5-206ENST00000623610 CARMIL2Q6F5E8 1435 aa11.17□□□□□ -0.62
CDKL5-206ENST00000623610 UGGT2Q9NYU1 1516 aa11.17□□□□□ -0.62
CDKL5-206ENST00000623610 KIF21BO75037 1637 aa11.17□□□□□ -0.62
CDKL5-206ENST00000623610 MMP14P50281 582 aa11.17□□□□□ -0.62
CDKL5-206ENST00000623610 GABBR1Q9UBS5 961 aa11.17□□□□□ -0.62
CDKL5-206ENST00000623610 STK25O00506 426 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms