RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
GTF3C2-214ENST00000622534 MYO5BQ9ULV0 1848 aa20.77■□□□□ 0.92
GTF3C2-214ENST00000622534 PPLO60437 1756 aa20.77■□□□□ 0.92
GTF3C2-214ENST00000622534 NRXN1Q9ULB1 1477 aa20.76■□□□□ 0.91
GTF3C2-214ENST00000622534 PRAG1Q86YV5 1406 aa20.75■□□□□ 0.91
GTF3C2-214ENST00000622534 THEMISQ8N1K5 641 aaPredicted RBP20.75■□□□□ 0.91
GTF3C2-214ENST00000622534 SLIT1O75093 1534 aa20.75■□□□□ 0.91
GTF3C2-214ENST00000622534 TMEM2Q9UHN6 1383 aa20.74■□□□□ 0.91
GTF3C2-214ENST00000622534 ARHGAP23Q9P227 1491 aa20.74■□□□□ 0.91
GTF3C2-214ENST00000622534 VGFO15240 615 aaPredicted RBP20.73■□□□□ 0.91
GTF3C2-214ENST00000622534 RIMS2Q9UQ26 1411 aa20.73■□□□□ 0.91
GTF3C2-214ENST00000622534 HDGFP51858 240 aaKnown RBP20.73■□□□□ 0.91
GTF3C2-214ENST00000622534 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.73■□□□□ 0.91
GTF3C2-214ENST00000622534 KDM2AQ9Y2K7 1162 aa20.73■□□□□ 0.91
GTF3C2-214ENST00000622534 NBPF8Q3BBV2 869 aa20.71■□□□□ 0.91
GTF3C2-214ENST00000622534 ADGRF5Q8IZF2 1346 aa20.68■□□□□ 0.9
GTF3C2-214ENST00000622534 PIK3C2GO75747 1445 aa20.68■□□□□ 0.9
GTF3C2-214ENST00000622534 RALGAPBQ86X10 1494 aa20.67■□□□□ 0.9
GTF3C2-214ENST00000622534 KIAA1210Q9ULL0 1709 aa20.66■□□□□ 0.9
GTF3C2-214ENST00000622534 TRPM1Q7Z4N2 1603 aa20.65■□□□□ 0.9
GTF3C2-214ENST00000622534 EID1Q9Y6B2 187 aa20.64■□□□□ 0.89
GTF3C2-214ENST00000622534 SCAF11Q99590 1463 aaKnown RBP20.62■□□□□ 0.89
GTF3C2-214ENST00000622534 GPRASP1Q5JY77 1395 aa20.62■□□□□ 0.89
GTF3C2-214ENST00000622534 PLEKHG1Q9ULL1 1385 aa20.62■□□□□ 0.89
GTF3C2-214ENST00000622534 TXNDC2Q86VQ3 553 aa20.62■□□□□ 0.89
GTF3C2-214ENST00000622534 C14orf93Q9H972 538 aaKnown RBP20.62■□□□□ 0.89
GTF3C2-214ENST00000622534 SETBP1Q9Y6X0 1596 aa20.62■□□□□ 0.89
GTF3C2-214ENST00000622534 LTKP29376 864 aa20.61■□□□□ 0.89
GTF3C2-214ENST00000622534 NUTM2DQ5VT03 806 aaPredicted RBP20.61■□□□□ 0.89
GTF3C2-214ENST00000622534 LAMC1P11047 1609 aa20.61■□□□□ 0.89
GTF3C2-214ENST00000622534 LMTK3Q96Q04 1460 aa20.61■□□□□ 0.89
GTF3C2-214ENST00000622534 ANKLE2Q86XL3 938 aa20.59■□□□□ 0.89
GTF3C2-214ENST00000622534 ROCK2O75116 1388 aaKnown RBP20.57■□□□□ 0.88
GTF3C2-214ENST00000622534 CFAP70Q5T0N1 1121 aa20.57■□□□□ 0.88
GTF3C2-214ENST00000622534 NRXN3Q9Y4C0 1643 aa20.57■□□□□ 0.88
GTF3C2-214ENST00000622534 ALKQ9UM73 1620 aa20.56■□□□□ 0.88
GTF3C2-214ENST00000622534 MED14O60244 1454 aa20.56■□□□□ 0.88
GTF3C2-214ENST00000622534 NBPF1Q3BBV0 1214 aa20.55■□□□□ 0.88
GTF3C2-214ENST00000622534 ADGRB1O14514 1584 aa20.54■□□□□ 0.88
GTF3C2-214ENST00000622534 ADAMTS13Q76LX8 1427 aa20.53■□□□□ 0.88
GTF3C2-214ENST00000622534 IQGAP1P46940 1657 aa20.53■□□□□ 0.88
GTF3C2-214ENST00000622534 DIP2AQ14689 1571 aa20.53■□□□□ 0.88
GTF3C2-214ENST00000622534 SETD1AO15047 1707 aaKnown RBP20.53■□□□□ 0.88
GTF3C2-214ENST00000622534 POLR1AO95602 1720 aaPredicted RBP20.53■□□□□ 0.88
GTF3C2-214ENST00000622534 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
GTF3C2-214ENST00000622534 TBX22Q9Y458 520 aa20.5■□□□□ 0.87
GTF3C2-214ENST00000622534 ASXL1Q8IXJ9 1541 aa20.5■□□□□ 0.87
GTF3C2-214ENST00000622534 NPHP4O75161 1426 aaPredicted RBP20.5■□□□□ 0.87
GTF3C2-214ENST00000622534 EIF4G2P78344 907 aaKnown RBP eCLIP20.47■□□□□ 0.87
GTF3C2-214ENST00000622534 HSPA2P54652 639 aa20.47■□□□□ 0.87
GTF3C2-214ENST00000622534 BCANQ96GW7 911 aa20.47■□□□□ 0.87
GTF3C2-214ENST00000622534 NCKAP5LQ9HCH0 1330 aa20.47■□□□□ 0.87
GTF3C2-214ENST00000622534 USP47Q96K76 1375 aa20.46■□□□□ 0.87
GTF3C2-214ENST00000622534 PIK3R4Q99570 1358 aa20.45■□□□□ 0.87
GTF3C2-214ENST00000622534 METP08581 1390 aa20.45■□□□□ 0.86
GTF3C2-214ENST00000622534 TMEM132EQ6IEE7 984 aa20.45■□□□□ 0.86
GTF3C2-214ENST00000622534 YTHDC2Q9H6S0 1430 aaKnown RBP20.44■□□□□ 0.86
GTF3C2-214ENST00000622534 LRPPRCP42704 1394 aaKnown RBP20.44■□□□□ 0.86
GTF3C2-214ENST00000622534 EIF3AQ14152 1382 aaKnown RBP20.42■□□□□ 0.86
GTF3C2-214ENST00000622534 ABCC11Q96J66 1382 aa20.42■□□□□ 0.86
GTF3C2-214ENST00000622534 HSPA5P11021 654 aaKnown RBP20.42■□□□□ 0.86
GTF3C2-214ENST00000622534 SLC26A8Q96RN1 970 aa20.42■□□□□ 0.86
GTF3C2-214ENST00000622534 DLC1Q96QB1 1528 aa20.42■□□□□ 0.86
GTF3C2-214ENST00000622534 TECPR2O15040 1411 aa20.41■□□□□ 0.86
GTF3C2-214ENST00000622534 STRCQ7RTU9 1775 aa20.41■□□□□ 0.86
GTF3C2-214ENST00000622534 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
GTF3C2-214ENST00000622534 SIRT1Q96EB6 747 aa20.4■□□□□ 0.86
GTF3C2-214ENST00000622534 KNDC1Q76NI1 1749 aa20.39■□□□□ 0.85
GTF3C2-214ENST00000622534 PTPRUQ92729 1446 aa20.37■□□□□ 0.85
GTF3C2-214ENST00000622534 TRAK1Q9UPV9 953 aa20.37■□□□□ 0.85
GTF3C2-214ENST00000622534 CPS1P31327 1500 aa20.36■□□□□ 0.85
GTF3C2-214ENST00000622534 ARHGEF28Q8N1W1 1705 aaKnown RBP20.36■□□□□ 0.85
GTF3C2-214ENST00000622534 ST20-MTHFSA0A0A6YYL1 179 aa20.36■□□□□ 0.85
GTF3C2-214ENST00000622534 FAM135BQ49AJ0 1406 aa20.36■□□□□ 0.85
GTF3C2-214ENST00000622534 ZNF316A6NFI3 1004 aaPredicted RBP20.35■□□□□ 0.85
GTF3C2-214ENST00000622534 XRN1Q8IZH2 1706 aaKnown RBP20.35■□□□□ 0.85
GTF3C2-214ENST00000622534 SBNO2Q9Y2G9 1366 aa20.34■□□□□ 0.85
GTF3C2-214ENST00000622534 SLC24A1O60721 1099 aa20.34■□□□□ 0.85
GTF3C2-214ENST00000622534 STK26Q9P289 416 aa20.34■□□□□ 0.85
GTF3C2-214ENST00000622534 DMRT2Q9Y5R5 561 aa20.34■□□□□ 0.85
GTF3C2-214ENST00000622534 PTCH1Q13635 1447 aa20.33■□□□□ 0.85
GTF3C2-214ENST00000622534 CENPJQ9HC77 1338 aaPredicted RBP20.33■□□□□ 0.85
GTF3C2-214ENST00000622534 CHD2O14647 1828 aaKnown RBP20.33■□□□□ 0.84
GTF3C2-214ENST00000622534 AMOTL2Q9Y2J4 779 aa20.33■□□□□ 0.84
GTF3C2-214ENST00000622534 NWD1Q149M9 1564 aa20.32■□□□□ 0.84
GTF3C2-214ENST00000622534 AEBP2Q6ZN18 517 aaPredicted RBP20.32■□□□□ 0.84
GTF3C2-214ENST00000622534 TESK2Q96S53 571 aa20.32■□□□□ 0.84
GTF3C2-214ENST00000622534 KCNA6P17658 529 aa20.31■□□□□ 0.84
GTF3C2-214ENST00000622534 HIRIP3Q9BW71 556 aaPredicted RBP20.29■□□□□ 0.84
GTF3C2-214ENST00000622534 ROBO2Q9HCK4 1378 aa20.29■□□□□ 0.84
GTF3C2-214ENST00000622534 PRAM1Q96QH2 718 aa20.28■□□□□ 0.84
GTF3C2-214ENST00000622534 QRICH2Q9H0J4 1663 aa20.27■□□□□ 0.84
GTF3C2-214ENST00000622534 POGKQ9P215 609 aa20.27■□□□□ 0.84
GTF3C2-214ENST00000622534 NKTRP30414 1462 aaKnown RBP20.26■□□□□ 0.83
GTF3C2-214ENST00000622534 PLEKHH1Q9ULM0 1364 aa20.25■□□□□ 0.83
GTF3C2-214ENST00000622534 TMF1P82094 1093 aa20.24■□□□□ 0.83
GTF3C2-214ENST00000622534 WAPLQ7Z5K2 1190 aa20.24■□□□□ 0.83
GTF3C2-214ENST00000622534 C11orf95C9JLR9 678 aaPredicted RBP20.21■□□□□ 0.83
GTF3C2-214ENST00000622534 CDCA8Q53HL2 280 aa20.21■□□□□ 0.83
GTF3C2-214ENST00000622534 PUS7Q96PZ0 661 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms