RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 KDM5AP29375 1690 aaKnown RBP15.19■□□□□ 0.02
CPNE3-212ENST00000621783 NRXN1Q9ULB1 1477 aa15.18■□□□□ 0.02
CPNE3-212ENST00000621783 A2ML1A8K2U0 1454 aa15.17■□□□□ 0.02
CPNE3-212ENST00000621783 NLRP1Q9C000 1473 aa15.17■□□□□ 0.02
CPNE3-212ENST00000621783 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
CPNE3-212ENST00000621783 UBR1Q8IWV7 1749 aa15.17■□□□□ 0.02
CPNE3-212ENST00000621783 LAMC1P11047 1609 aa15.17■□□□□ 0.02
CPNE3-212ENST00000621783 STAC3Q96MF2 364 aa15.16■□□□□ 0.02
CPNE3-212ENST00000621783 KIAA1210Q9ULL0 1709 aa15.16■□□□□ 0.02
CPNE3-212ENST00000621783 RPGRIP1LQ68CZ1 1315 aa15.16■□□□□ 0.02
CPNE3-212ENST00000621783 ZNF316A6NFI3 1004 aaPredicted RBP15.15■□□□□ 0.02
CPNE3-212ENST00000621783 ROCK2O75116 1388 aaKnown RBP15.13■□□□□ 0.01
CPNE3-212ENST00000621783 PIK3C2GO75747 1445 aa15.13■□□□□ 0.01
CPNE3-212ENST00000621783 ADGRF5Q8IZF2 1346 aa15.13■□□□□ 0.01
CPNE3-212ENST00000621783 GPRASP1Q5JY77 1395 aa15.12■□□□□ 0.01
CPNE3-212ENST00000621783 STAG3Q9UJ98 1225 aa15.12■□□□□ 0.01
CPNE3-212ENST00000621783 ZNF142P52746 1687 aaPredicted RBP15.12■□□□□ 0.01
CPNE3-212ENST00000621783 ZFYVE9O95405 1425 aa15.11■□□□□ 0.01
CPNE3-212ENST00000621783 PTPRMP28827 1452 aa15.11■□□□□ 0.01
CPNE3-212ENST00000621783 CEP170BQ9Y4F5 1589 aaPredicted RBP15.11■□□□□ 0.01
CPNE3-212ENST00000621783 RIMS2Q9UQ26 1411 aa15.1■□□□□ 0.01
CPNE3-212ENST00000621783 USP47Q96K76 1375 aa15.1■□□□□ 0.01
CPNE3-212ENST00000621783 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
CPNE3-212ENST00000621783 SETBP1Q9Y6X0 1596 aa15.09■□□□□ 0.01
CPNE3-212ENST00000621783 HSPA5P11021 654 aaKnown RBP15.08■□□□□ 0
CPNE3-212ENST00000621783 EIF4G2P78344 907 aaKnown RBP eCLIP15.08■□□□□ 0
CPNE3-212ENST00000621783 CARD11Q9BXL7 1154 aa15.08■□□□□ 0
CPNE3-212ENST00000621783 NBPF1Q3BBV0 1214 aa15.07■□□□□ 0
CPNE3-212ENST00000621783 VGFO15240 615 aaPredicted RBP15.06■□□□□ 0
CPNE3-212ENST00000621783 NUTM2DQ5VT03 806 aaPredicted RBP15.06■□□□□ 0
CPNE3-212ENST00000621783 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
CPNE3-212ENST00000621783 SLIT1O75093 1534 aa15.06■□□□□ 0
CPNE3-212ENST00000621783 ADGRB1O14514 1584 aa15.06■□□□□ 0
CPNE3-212ENST00000621783 ADRA2BP18089 450 aa15.05■□□□□ -0
CPNE3-212ENST00000621783 TMEM2Q9UHN6 1383 aa15.05■□□□□ -0
CPNE3-212ENST00000621783 ARHGAP23Q9P227 1491 aa15.05■□□□□ -0
CPNE3-212ENST00000621783 ASXL1Q8IXJ9 1541 aa15.05■□□□□ -0
CPNE3-212ENST00000621783 NRXN3Q9Y4C0 1643 aa15.04■□□□□ -0
CPNE3-212ENST00000621783 CFAP70Q5T0N1 1121 aa15.04■□□□□ -0
CPNE3-212ENST00000621783 SETD1AO15047 1707 aaKnown RBP15.03■□□□□ -0
CPNE3-212ENST00000621783 SCAF11Q99590 1463 aaKnown RBP15.03■□□□□ -0
CPNE3-212ENST00000621783 POLR1AO95602 1720 aaPredicted RBP15.03■□□□□ -0
CPNE3-212ENST00000621783 C14orf93Q9H972 538 aaKnown RBP15.02■□□□□ -0
CPNE3-212ENST00000621783 ALKQ9UM73 1620 aa15.02□□□□□ -0.01
CPNE3-212ENST00000621783 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.01□□□□□ -0.01
CPNE3-212ENST00000621783 SETD1BQ9UPS6 1966 aaKnown RBP14.98□□□□□ -0.01
CPNE3-212ENST00000621783 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
CPNE3-212ENST00000621783 PLEKHG1Q9ULL1 1385 aa14.98□□□□□ -0.01
CPNE3-212ENST00000621783 ARHGEF28Q8N1W1 1705 aaKnown RBP14.97□□□□□ -0.01
CPNE3-212ENST00000621783 KDM4FA0A1W2PPD8 638 aa14.97□□□□□ -0.01
CPNE3-212ENST00000621783 HDGFP51858 240 aaKnown RBP14.97□□□□□ -0.01
CPNE3-212ENST00000621783 THEMISQ8N1K5 641 aaPredicted RBP14.97□□□□□ -0.01
CPNE3-212ENST00000621783 ST20-MTHFSA0A0A6YYL1 179 aa14.96□□□□□ -0.01
CPNE3-212ENST00000621783 LTKP29376 864 aa14.95□□□□□ -0.02
CPNE3-212ENST00000621783 QRICH2Q9H0J4 1663 aa14.94□□□□□ -0.02
CPNE3-212ENST00000621783 ADAMTS13Q76LX8 1427 aa14.94□□□□□ -0.02
CPNE3-212ENST00000621783 TMEM132EQ6IEE7 984 aa14.94□□□□□ -0.02
CPNE3-212ENST00000621783 TXNDC2Q86VQ3 553 aa14.94□□□□□ -0.02
CPNE3-212ENST00000621783 CCDC7Q96M83 1385 aa14.94□□□□□ -0.02
CPNE3-212ENST00000621783 DIP2AQ14689 1571 aa14.94□□□□□ -0.02
CPNE3-212ENST00000621783 WASHC2AQ641Q2 1341 aa14.93□□□□□ -0.02
CPNE3-212ENST00000621783 YTHDC2Q9H6S0 1430 aaKnown RBP14.93□□□□□ -0.02
CPNE3-212ENST00000621783 KNDC1Q76NI1 1749 aa14.93□□□□□ -0.02
CPNE3-212ENST00000621783 EID1Q9Y6B2 187 aa14.93□□□□□ -0.02
CPNE3-212ENST00000621783 C11orf95C9JLR9 678 aaPredicted RBP14.92□□□□□ -0.02
CPNE3-212ENST00000621783 MED14O60244 1454 aa14.92□□□□□ -0.02
CPNE3-212ENST00000621783 DIEXFQ68CQ4 756 aaKnown RBP14.91□□□□□ -0.02
CPNE3-212ENST00000621783 TESK2Q96S53 571 aa14.91□□□□□ -0.02
CPNE3-212ENST00000621783 DLC1Q96QB1 1528 aa14.91□□□□□ -0.02
CPNE3-212ENST00000621783 KIF7Q2M1P5 1343 aa14.91□□□□□ -0.02
CPNE3-212ENST00000621783 METP08581 1390 aa14.89□□□□□ -0.03
CPNE3-212ENST00000621783 LRPPRCP42704 1394 aaKnown RBP14.89□□□□□ -0.03
CPNE3-212ENST00000621783 DISP3Q9P2K9 1392 aa14.89□□□□□ -0.03
CPNE3-212ENST00000621783 CPS1P31327 1500 aa14.89□□□□□ -0.03
CPNE3-212ENST00000621783 TRAK1Q9UPV9 953 aa14.89□□□□□ -0.03
CPNE3-212ENST00000621783 SBNO2Q9Y2G9 1366 aa14.88□□□□□ -0.03
CPNE3-212ENST00000621783 BCANQ96GW7 911 aa14.88□□□□□ -0.03
CPNE3-212ENST00000621783 CENPJQ9HC77 1338 aaPredicted RBP14.88□□□□□ -0.03
CPNE3-212ENST00000621783 TECPR2O15040 1411 aa14.87□□□□□ -0.03
CPNE3-212ENST00000621783 DDX10Q13206 875 aaKnown RBP14.86□□□□□ -0.03
CPNE3-212ENST00000621783 ANKLE2Q86XL3 938 aa14.86□□□□□ -0.03
CPNE3-212ENST00000621783 STK26Q9P289 416 aa14.86□□□□□ -0.03
CPNE3-212ENST00000621783 LMTK3Q96Q04 1460 aa14.86□□□□□ -0.03
CPNE3-212ENST00000621783 ABCC11Q96J66 1382 aa14.85□□□□□ -0.03
CPNE3-212ENST00000621783 TMF1P82094 1093 aa14.85□□□□□ -0.03
CPNE3-212ENST00000621783 XRN1Q8IZH2 1706 aaKnown RBP14.85□□□□□ -0.03
CPNE3-212ENST00000621783 NPHP4O75161 1426 aaPredicted RBP14.84□□□□□ -0.03
CPNE3-212ENST00000621783 TULP4Q9NRJ4 1543 aa14.84□□□□□ -0.03
CPNE3-212ENST00000621783 PTPRUQ92729 1446 aa14.83□□□□□ -0.03
CPNE3-212ENST00000621783 SLC26A8Q96RN1 970 aa14.83□□□□□ -0.04
CPNE3-212ENST00000621783 POLR3GLQ9BT43 218 aa14.83□□□□□ -0.04
CPNE3-212ENST00000621783 MYOM1P52179 1685 aa14.83□□□□□ -0.04
CPNE3-212ENST00000621783 TBX22Q9Y458 520 aa14.82□□□□□ -0.04
CPNE3-212ENST00000621783 FAM135BQ49AJ0 1406 aa14.82□□□□□ -0.04
CPNE3-212ENST00000621783 PRAM1Q96QH2 718 aa14.81□□□□□ -0.04
CPNE3-212ENST00000621783 NCKAP5LQ9HCH0 1330 aa14.8□□□□□ -0.04
CPNE3-212ENST00000621783 PIK3R4Q99570 1358 aa14.8□□□□□ -0.04
CPNE3-212ENST00000621783 PLEKHH1Q9ULM0 1364 aa14.8□□□□□ -0.04
CPNE3-212ENST00000621783 PTCH1Q13635 1447 aa14.8□□□□□ -0.04
CPNE3-212ENST00000621783 SLC24A1O60721 1099 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms