RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 MSH6P52701 1360 aa24.42■■□□□ 1.5
SNHG28-203ENST00000621242 SETD1AO15047 1707 aaKnown RBP24.41■■□□□ 1.5
SNHG28-203ENST00000621242 CHD2O14647 1828 aaKnown RBP24.41■■□□□ 1.5
SNHG28-203ENST00000621242 FGD6Q6ZV73 1430 aa24.41■■□□□ 1.5
SNHG28-203ENST00000621242 SLC52A1Q9NWF4 448 aa24.4■■□□□ 1.5
SNHG28-203ENST00000621242 SLAIN2Q9P270 581 aa24.4■■□□□ 1.5
SNHG28-203ENST00000621242 APLP2Q06481 763 aa24.38■■□□□ 1.49
SNHG28-203ENST00000621242 JCADQ9P266 1359 aa24.36■■□□□ 1.49
SNHG28-203ENST00000621242 GCC2Q8IWJ2 1684 aa24.34■■□□□ 1.49
SNHG28-203ENST00000621242 ZFYVE9O95405 1425 aa24.34■■□□□ 1.49
SNHG28-203ENST00000621242 PLEKHG1Q9ULL1 1385 aa24.33■■□□□ 1.49
SNHG28-203ENST00000621242 COL16A1Q07092 1604 aaPredicted RBP24.32■■□□□ 1.48
SNHG28-203ENST00000621242 PPP1R15AO75807 674 aaPredicted RBP24.31■■□□□ 1.48
SNHG28-203ENST00000621242 RIMS2Q9UQ26 1411 aa24.31■■□□□ 1.48
SNHG28-203ENST00000621242 RPRD2Q5VT52 1461 aaKnown RBP24.31■■□□□ 1.48
SNHG28-203ENST00000621242 TMEM131LA2VDJ0 1609 aa24.3■■□□□ 1.48
SNHG28-203ENST00000621242 ADGRL2O95490 1459 aa24.3■■□□□ 1.48
SNHG28-203ENST00000621242 HDGFP51858 240 aaKnown RBP24.28■■□□□ 1.48
SNHG28-203ENST00000621242 TBX22Q9Y458 520 aa24.26■■□□□ 1.47
SNHG28-203ENST00000621242 ANKRD50Q9ULJ7 1429 aa24.26■■□□□ 1.47
SNHG28-203ENST00000621242 LRP6O75581 1613 aa24.25■■□□□ 1.47
SNHG28-203ENST00000621242 C14orf37Q86TY3 774 aa24.25■■□□□ 1.47
SNHG28-203ENST00000621242 NCOA3Q9Y6Q9 1424 aa24.25■■□□□ 1.47
SNHG28-203ENST00000621242 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.24■■□□□ 1.47
SNHG28-203ENST00000621242 CHGAP10645 457 aaKnown RBP24.23■■□□□ 1.47
SNHG28-203ENST00000621242 SPATA31A6Q5VVP1 1343 aa24.22■■□□□ 1.47
SNHG28-203ENST00000621242 FAM50AQ14320 339 aaKnown RBP24.22■■□□□ 1.47
SNHG28-203ENST00000621242 MEX3CQ5U5Q3 659 aaKnown RBP24.22■■□□□ 1.47
SNHG28-203ENST00000621242 NUTM2DQ5VT03 806 aaPredicted RBP24.22■■□□□ 1.47
SNHG28-203ENST00000621242 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.21■■□□□ 1.47
SNHG28-203ENST00000621242 ADAMTS13Q76LX8 1427 aa24.2■■□□□ 1.46
SNHG28-203ENST00000621242 SHPRHQ149N8 1683 aa24.2■■□□□ 1.46
SNHG28-203ENST00000621242 AHDC1Q5TGY3 1603 aaPredicted RBP24.2■■□□□ 1.46
SNHG28-203ENST00000621242 ZNF772Q68DY9 489 aaPredicted RBP24.19■■□□□ 1.46
SNHG28-203ENST00000621242 CADPS2Q86UW7 1296 aa24.19■■□□□ 1.46
SNHG28-203ENST00000621242 E9PCH4 1651 aa24.18■■□□□ 1.46
SNHG28-203ENST00000621242 ATF3P18847 181 aa24.18■■□□□ 1.46
SNHG28-203ENST00000621242 TRIM52Q96A61 297 aa24.18■■□□□ 1.46
SNHG28-203ENST00000621242 C19orf44Q9H6X5 657 aa24.18■■□□□ 1.46
SNHG28-203ENST00000621242 UPF1Q92900 1129 aaKnown RBP eCLIP24.17■■□□□ 1.46
SNHG28-203ENST00000621242 DIP2AQ14689 1571 aa24.16■■□□□ 1.46
SNHG28-203ENST00000621242 UNC13BO14795 1591 aa24.16■■□□□ 1.46
SNHG28-203ENST00000621242 PIK3R4Q99570 1358 aa24.15■■□□□ 1.46
SNHG28-203ENST00000621242 AMOTL2Q9Y2J4 779 aa24.12■■□□□ 1.45
SNHG28-203ENST00000621242 TRPM2O94759 1503 aa24.11■■□□□ 1.45
SNHG28-203ENST00000621242 BRINP3Q76B58 766 aa24.11■■□□□ 1.45
SNHG28-203ENST00000621242 PTPRUQ92729 1446 aa24.1■■□□□ 1.45
SNHG28-203ENST00000621242 NUTM2BA6NNL0 878 aaPredicted RBP24.1■■□□□ 1.45
SNHG28-203ENST00000621242 NUTM2EB1AL46 878 aaPredicted RBP24.1■■□□□ 1.45
SNHG28-203ENST00000621242 NUTM2AQ8IVF1 878 aaPredicted RBP24.1■■□□□ 1.45
SNHG28-203ENST00000621242 RXRBP28702 533 aa24.09■■□□□ 1.45
SNHG28-203ENST00000621242 IQGAP3Q86VI3 1631 aa24.08■■□□□ 1.45
SNHG28-203ENST00000621242 ASXL1Q8IXJ9 1541 aa24.04■■□□□ 1.44
SNHG28-203ENST00000621242 XRN1Q8IZH2 1706 aaKnown RBP24.03■■□□□ 1.44
SNHG28-203ENST00000621242 AFF2P51816 1311 aa24.03■■□□□ 1.44
SNHG28-203ENST00000621242 NHSL1Q5SYE7 1610 aa24.02■■□□□ 1.44
SNHG28-203ENST00000621242 NRXN3Q9Y4C0 1643 aa24.02■■□□□ 1.44
SNHG28-203ENST00000621242 DCCP43146 1447 aa24.02■■□□□ 1.44
SNHG28-203ENST00000621242 CDK12Q9NYV4 1490 aaPredicted RBP24.01■■□□□ 1.43
SNHG28-203ENST00000621242 SETD5Q9C0A6 1442 aa24.01■■□□□ 1.43
SNHG28-203ENST00000621242 NUP155O75694 1391 aa24■■□□□ 1.43
SNHG28-203ENST00000621242 MST1RQ04912 1400 aa24■■□□□ 1.43
SNHG28-203ENST00000621242 ROCK1Q13464 1354 aa23.99■■□□□ 1.43
SNHG28-203ENST00000621242 LRRC59Q96AG4 307 aaKnown RBP23.97■■□□□ 1.43
SNHG28-203ENST00000621242 SETBP1Q9Y6X0 1596 aa23.97■■□□□ 1.43
SNHG28-203ENST00000621242 SPHKAPQ2M3C7 1700 aa23.96■■□□□ 1.43
SNHG28-203ENST00000621242 DDX17Q92841 729 aaKnown RBP23.95■■□□□ 1.42
SNHG28-203ENST00000621242 METP08581 1390 aa23.94■■□□□ 1.42
SNHG28-203ENST00000621242 ZNF326Q5BKZ1 582 aaKnown RBP23.94■■□□□ 1.42
SNHG28-203ENST00000621242 C8orf37Q96NL8 207 aa23.94■■□□□ 1.42
SNHG28-203ENST00000621242 QTRT2Q9H974 415 aaKnown RBP23.93■■□□□ 1.42
SNHG28-203ENST00000621242 NALCNQ8IZF0 1738 aa23.92■■□□□ 1.42
SNHG28-203ENST00000621242 RGS12O14924 1447 aa23.92■■□□□ 1.42
SNHG28-203ENST00000621242 PNPLA6Q8IY17 1366 aa23.91■■□□□ 1.42
SNHG28-203ENST00000621242 RBM6P78332 1123 aaKnown RBP23.91■■□□□ 1.42
SNHG28-203ENST00000621242 ITGAEP38570 1179 aa23.9■■□□□ 1.42
SNHG28-203ENST00000621242 ADGRL3Q9HAR2 1447 aa23.9■■□□□ 1.42
SNHG28-203ENST00000621242 SRCAPQ6ZRS2 3230 aa23.87■■□□□ 1.41
SNHG28-203ENST00000621242 ADAMTS2O95450 1211 aa23.85■■□□□ 1.41
SNHG28-203ENST00000621242 NGLY1Q96IV0 654 aa23.85■■□□□ 1.41
SNHG28-203ENST00000621242 NEXMIFQ5QGS0 1516 aa23.84■■□□□ 1.41
SNHG28-203ENST00000621242 C1orf167Q5SNV9 1468 aa23.83■■□□□ 1.41
SNHG28-203ENST00000621242 CLTCL1P53675 1640 aa23.83■■□□□ 1.41
SNHG28-203ENST00000621242 KIF1BO60333 1816 aa23.82■■□□□ 1.4
SNHG28-203ENST00000621242 LAMC1P11047 1609 aa23.81■■□□□ 1.4
SNHG28-203ENST00000621242 ORAI2Q96SN7 254 aa23.78■■□□□ 1.4
SNHG28-203ENST00000621242 USP21Q9UK80 565 aa23.77■■□□□ 1.4
SNHG28-203ENST00000621242 SOS2Q07890 1332 aaPredicted RBP23.77■■□□□ 1.4
SNHG28-203ENST00000621242 ATAD2Q6PL18 1390 aa23.75■■□□□ 1.39
SNHG28-203ENST00000621242 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
SNHG28-203ENST00000621242 PTCH1Q13635 1447 aa23.74■■□□□ 1.39
SNHG28-203ENST00000621242 TRPC5Q9UL62 973 aaPredicted RBP23.73■■□□□ 1.39
SNHG28-203ENST00000621242 EP400Q96L91 3159 aa23.71■■□□□ 1.39
SNHG28-203ENST00000621242 PPARGC1BQ86YN6 1023 aaKnown RBP23.71■■□□□ 1.39
SNHG28-203ENST00000621242 FNBP4Q8N3X1 1017 aaPredicted RBP23.71■■□□□ 1.39
SNHG28-203ENST00000621242 COL22A1Q8NFW1 1626 aaPredicted RBP23.7■■□□□ 1.39
SNHG28-203ENST00000621242 VGFO15240 615 aaPredicted RBP23.69■■□□□ 1.38
SNHG28-203ENST00000621242 ATRNO75882 1429 aa23.67■■□□□ 1.38
SNHG28-203ENST00000621242 MARF1Q9Y4F3 1742 aaKnown RBP23.66■■□□□ 1.38
SNHG28-203ENST00000621242 PRAG1Q86YV5 1406 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms