RNA–Protein interactions for RNA: ENST00000621008.1

PCDHGC3-206, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-206ENST00000621008 CLTCL1P53675 1640 aa19.07■□□□□ 0.64
PCDHGC3-206ENST00000621008 RPGRIP1LQ68CZ1 1315 aa19.07■□□□□ 0.64
PCDHGC3-206ENST00000621008 CHGAP10645 457 aaKnown RBP19.07■□□□□ 0.64
PCDHGC3-206ENST00000621008 CCDC144AA2RUR9 1427 aa19.07■□□□□ 0.64
PCDHGC3-206ENST00000621008 PLEKHG1Q9ULL1 1385 aa19.06■□□□□ 0.64
PCDHGC3-206ENST00000621008 CPS1P31327 1500 aa19.05■□□□□ 0.64
PCDHGC3-206ENST00000621008 LTBP4Q8N2S1 1624 aa19.04■□□□□ 0.64
PCDHGC3-206ENST00000621008 PPP1R15AO75807 674 aaPredicted RBP19.04■□□□□ 0.64
PCDHGC3-206ENST00000621008 CERKQ8TCT0 537 aa19.04■□□□□ 0.64
PCDHGC3-206ENST00000621008 DIP2AQ14689 1571 aa19.02■□□□□ 0.63
PCDHGC3-206ENST00000621008 ZNF326Q5BKZ1 582 aaKnown RBP19.01■□□□□ 0.63
PCDHGC3-206ENST00000621008 VGFO15240 615 aaPredicted RBP19■□□□□ 0.63
PCDHGC3-206ENST00000621008 TBX22Q9Y458 520 aa19■□□□□ 0.63
PCDHGC3-206ENST00000621008 ZNF335Q9H4Z2 1342 aaPredicted RBP19■□□□□ 0.63
PCDHGC3-206ENST00000621008 PIK3R4Q99570 1358 aa18.99■□□□□ 0.63
PCDHGC3-206ENST00000621008 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
PCDHGC3-206ENST00000621008 NEXMIFQ5QGS0 1516 aa18.97■□□□□ 0.63
PCDHGC3-206ENST00000621008 FOXD1Q16676 465 aa18.97■□□□□ 0.63
PCDHGC3-206ENST00000621008 STAC3Q96MF2 364 aa18.96■□□□□ 0.63
PCDHGC3-206ENST00000621008 SETBP1Q9Y6X0 1596 aa18.95■□□□□ 0.62
PCDHGC3-206ENST00000621008 SPATA31E1Q6ZUB1 1445 aa18.95■□□□□ 0.62
PCDHGC3-206ENST00000621008 KCNA6P17658 529 aa18.95■□□□□ 0.62
PCDHGC3-206ENST00000621008 FBXO41Q8TF61 875 aa18.95■□□□□ 0.62
PCDHGC3-206ENST00000621008 BCANQ96GW7 911 aa18.95■□□□□ 0.62
PCDHGC3-206ENST00000621008 PPLO60437 1756 aa18.93■□□□□ 0.62
PCDHGC3-206ENST00000621008 ADAMTS13Q76LX8 1427 aa18.91■□□□□ 0.62
PCDHGC3-206ENST00000621008 NKTRP30414 1462 aaKnown RBP18.91■□□□□ 0.62
PCDHGC3-206ENST00000621008 CHD2O14647 1828 aaKnown RBP18.9■□□□□ 0.62
PCDHGC3-206ENST00000621008 NWD1Q149M9 1564 aa18.9■□□□□ 0.62
PCDHGC3-206ENST00000621008 SLC26A8Q96RN1 970 aa18.9■□□□□ 0.62
PCDHGC3-206ENST00000621008 NCOA3Q9Y6Q9 1424 aa18.89■□□□□ 0.61
PCDHGC3-206ENST00000621008 IFT172Q9UG01 1749 aa18.88■□□□□ 0.61
PCDHGC3-206ENST00000621008 STRCP1A6NGW2 1772 aa18.87■□□□□ 0.61
PCDHGC3-206ENST00000621008 LRRC7Q96NW7 1537 aa18.87■□□□□ 0.61
PCDHGC3-206ENST00000621008 NRXN3Q9Y4C0 1643 aa18.86■□□□□ 0.61
PCDHGC3-206ENST00000621008 NUTM2DQ5VT03 806 aaPredicted RBP18.86■□□□□ 0.61
PCDHGC3-206ENST00000621008 MYOM2P54296 1465 aa18.84■□□□□ 0.61
PCDHGC3-206ENST00000621008 RGL3Q3MIN7 710 aa18.84■□□□□ 0.61
PCDHGC3-206ENST00000621008 TOM1O60784 492 aa18.83■□□□□ 0.6
PCDHGC3-206ENST00000621008 PROSER2Q86WR7 435 aaPredicted RBP18.81■□□□□ 0.6
PCDHGC3-206ENST00000621008 NRXN1Q9ULB1 1477 aa18.81■□□□□ 0.6
PCDHGC3-206ENST00000621008 PRAG1Q86YV5 1406 aa18.81■□□□□ 0.6
PCDHGC3-206ENST00000621008 ALKQ9UM73 1620 aa18.81■□□□□ 0.6
PCDHGC3-206ENST00000621008 LAMC1P11047 1609 aa18.79■□□□□ 0.6
PCDHGC3-206ENST00000621008 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
PCDHGC3-206ENST00000621008 PIK3C2GO75747 1445 aa18.79■□□□□ 0.6
PCDHGC3-206ENST00000621008 TMEM94Q12767 1356 aa18.78■□□□□ 0.6
PCDHGC3-206ENST00000621008 SETD1AO15047 1707 aaKnown RBP18.77■□□□□ 0.6
PCDHGC3-206ENST00000621008 XRN1Q8IZH2 1706 aaKnown RBP18.77■□□□□ 0.6
PCDHGC3-206ENST00000621008 ADGRF5Q8IZF2 1346 aa18.77■□□□□ 0.6
PCDHGC3-206ENST00000621008 ILDR1Q86SU0 546 aaPredicted RBP18.77■□□□□ 0.6
PCDHGC3-206ENST00000621008 DHX57Q6P158 1386 aaKnown RBP18.77■□□□□ 0.6
PCDHGC3-206ENST00000621008 UBAP1LF5GYI3 381 aa18.76■□□□□ 0.59
PCDHGC3-206ENST00000621008 METP08581 1390 aa18.76■□□□□ 0.59
PCDHGC3-206ENST00000621008 XIRP1Q702N8 1843 aaKnown RBP18.76■□□□□ 0.59
PCDHGC3-206ENST00000621008 C14orf93Q9H972 538 aaKnown RBP18.75■□□□□ 0.59
PCDHGC3-206ENST00000621008 PTCH1Q13635 1447 aa18.74■□□□□ 0.59
PCDHGC3-206ENST00000621008 PTPRUQ92729 1446 aa18.74■□□□□ 0.59
PCDHGC3-206ENST00000621008 MSH6P52701 1360 aa18.74■□□□□ 0.59
PCDHGC3-206ENST00000621008 DCAF11Q8TEB1 546 aa18.73■□□□□ 0.59
PCDHGC3-206ENST00000621008 SIRT1Q96EB6 747 aa18.72■□□□□ 0.59
PCDHGC3-206ENST00000621008 C19orf44Q9H6X5 657 aa18.72■□□□□ 0.59
PCDHGC3-206ENST00000621008 DCCP43146 1447 aa18.71■□□□□ 0.59
PCDHGC3-206ENST00000621008 ABCC11Q96J66 1382 aa18.7■□□□□ 0.58
PCDHGC3-206ENST00000621008 TECPR2O15040 1411 aa18.7■□□□□ 0.58
PCDHGC3-206ENST00000621008 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
PCDHGC3-206ENST00000621008 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
PCDHGC3-206ENST00000621008 CADPS2Q86UW7 1296 aa18.69■□□□□ 0.58
PCDHGC3-206ENST00000621008 CLSPNQ9HAW4 1339 aa18.69■□□□□ 0.58
PCDHGC3-206ENST00000621008 KNDC1Q76NI1 1749 aa18.68■□□□□ 0.58
PCDHGC3-206ENST00000621008 KIAA1210Q9ULL0 1709 aa18.67■□□□□ 0.58
PCDHGC3-206ENST00000621008 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
PCDHGC3-206ENST00000621008 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
PCDHGC3-206ENST00000621008 YTHDC2Q9H6S0 1430 aaKnown RBP18.66■□□□□ 0.58
PCDHGC3-206ENST00000621008 ATF3P18847 181 aa18.65■□□□□ 0.58
PCDHGC3-206ENST00000621008 PCGF6Q9BYE7 350 aa18.65■□□□□ 0.58
PCDHGC3-206ENST00000621008 KDM2AQ9Y2K7 1162 aa18.65■□□□□ 0.58
PCDHGC3-206ENST00000621008 CFAP70Q5T0N1 1121 aa18.64■□□□□ 0.57
PCDHGC3-206ENST00000621008 ADGRL3Q9HAR2 1447 aa18.64■□□□□ 0.57
PCDHGC3-206ENST00000621008 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.63■□□□□ 0.57
PCDHGC3-206ENST00000621008 DLC1Q96QB1 1528 aa18.63■□□□□ 0.57
PCDHGC3-206ENST00000621008 SLAIN2Q9P270 581 aa18.62■□□□□ 0.57
PCDHGC3-206ENST00000621008 ROBO2Q9HCK4 1378 aa18.62■□□□□ 0.57
PCDHGC3-206ENST00000621008 ASXL1Q8IXJ9 1541 aa18.61■□□□□ 0.57
PCDHGC3-206ENST00000621008 ADGRB1O14514 1584 aa18.6■□□□□ 0.57
PCDHGC3-206ENST00000621008 L3MBTL2Q969R5 705 aa18.6■□□□□ 0.57
PCDHGC3-206ENST00000621008 SIN3AQ96ST3 1273 aa18.6■□□□□ 0.57
PCDHGC3-206ENST00000621008 PIP4K2BP78356 416 aa18.59■□□□□ 0.57
PCDHGC3-206ENST00000621008 TMEM132EQ6IEE7 984 aa18.59■□□□□ 0.57
PCDHGC3-206ENST00000621008 TIMELESSQ9UNS1 1208 aa18.59■□□□□ 0.57
PCDHGC3-206ENST00000621008 NEUROD1Q13562 356 aa18.58■□□□□ 0.56
PCDHGC3-206ENST00000621008 RBM33Q96EV2 1170 aaKnown RBP18.58■□□□□ 0.56
PCDHGC3-206ENST00000621008 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
PCDHGC3-206ENST00000621008 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
PCDHGC3-206ENST00000621008 STK26Q9P289 416 aa18.56■□□□□ 0.56
PCDHGC3-206ENST00000621008 NALCNQ8IZF0 1738 aa18.56■□□□□ 0.56
PCDHGC3-206ENST00000621008 CDC42BPGQ6DT37 1551 aa18.55■□□□□ 0.56
PCDHGC3-206ENST00000621008 ROBO1Q9Y6N7 1651 aa18.54■□□□□ 0.56
PCDHGC3-206ENST00000621008 MST1RQ04912 1400 aa18.52■□□□□ 0.56
PCDHGC3-206ENST00000621008 POGKQ9P215 609 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms