RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 CCDC144AA2RUR9 1427 aa26.99■■□□□ 1.91
LITAF-220ENST00000620789 HDGFP51858 240 aaKnown RBP26.96■■□□□ 1.91
LITAF-220ENST00000620789 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.95■■□□□ 1.9
LITAF-220ENST00000620789 ZNF326Q5BKZ1 582 aaKnown RBP26.93■■□□□ 1.9
LITAF-220ENST00000620789 PPP1R15AO75807 674 aaPredicted RBP26.92■■□□□ 1.9
LITAF-220ENST00000620789 ZNF335Q9H4Z2 1342 aaPredicted RBP26.91■■□□□ 1.9
LITAF-220ENST00000620789 PLEKHG1Q9ULL1 1385 aa26.91■■□□□ 1.9
LITAF-220ENST00000620789 LTBP4Q8N2S1 1624 aa26.9■■□□□ 1.9
LITAF-220ENST00000620789 ANKRD30BQ9BXX2 1392 aa26.9■■□□□ 1.9
LITAF-220ENST00000620789 NEXMIFQ5QGS0 1516 aa26.9■■□□□ 1.9
LITAF-220ENST00000620789 NUTM2DQ5VT03 806 aaPredicted RBP26.88■■□□□ 1.89
LITAF-220ENST00000620789 SPATA31E1Q6ZUB1 1445 aa26.86■■□□□ 1.89
LITAF-220ENST00000620789 BCANQ96GW7 911 aa26.84■■□□□ 1.89
LITAF-220ENST00000620789 RPGRIP1LQ68CZ1 1315 aa26.84■■□□□ 1.89
LITAF-220ENST00000620789 SLC26A8Q96RN1 970 aa26.83■■□□□ 1.89
LITAF-220ENST00000620789 CERKQ8TCT0 537 aa26.82■■□□□ 1.88
LITAF-220ENST00000620789 SENP3Q9H4L4 574 aaPredicted RBP26.81■■□□□ 1.88
LITAF-220ENST00000620789 PPLO60437 1756 aa26.81■■□□□ 1.88
LITAF-220ENST00000620789 CPS1P31327 1500 aa26.8■■□□□ 1.88
LITAF-220ENST00000620789 ADAMTS13Q76LX8 1427 aa26.79■■□□□ 1.88
LITAF-220ENST00000620789 DIP2AQ14689 1571 aa26.79■■□□□ 1.88
LITAF-220ENST00000620789 SETBP1Q9Y6X0 1596 aa26.79■■□□□ 1.88
LITAF-220ENST00000620789 RGL3Q3MIN7 710 aa26.78■■□□□ 1.88
LITAF-220ENST00000620789 STRCP1A6NGW2 1772 aa26.78■■□□□ 1.88
LITAF-220ENST00000620789 NRXN3Q9Y4C0 1643 aa26.77■■□□□ 1.88
LITAF-220ENST00000620789 VGFO15240 615 aaPredicted RBP26.77■■□□□ 1.88
LITAF-220ENST00000620789 IFT172Q9UG01 1749 aa26.76■■□□□ 1.88
LITAF-220ENST00000620789 TBX22Q9Y458 520 aa26.76■■□□□ 1.87
LITAF-220ENST00000620789 IQSEC2Q5JU85 1478 aa26.73■■□□□ 1.87
LITAF-220ENST00000620789 DHX57Q6P158 1386 aaKnown RBP26.72■■□□□ 1.87
LITAF-220ENST00000620789 NWD1Q149M9 1564 aa26.71■■□□□ 1.87
LITAF-220ENST00000620789 KCNA6P17658 529 aa26.7■■□□□ 1.86
LITAF-220ENST00000620789 PCGF6Q9BYE7 350 aa26.7■■□□□ 1.86
LITAF-220ENST00000620789 CHD2O14647 1828 aaKnown RBP26.69■■□□□ 1.86
LITAF-220ENST00000620789 PIK3R4Q99570 1358 aa26.69■■□□□ 1.86
LITAF-220ENST00000620789 LRRC7Q96NW7 1537 aa26.67■■□□□ 1.86
LITAF-220ENST00000620789 ADGRF5Q8IZF2 1346 aa26.66■■□□□ 1.86
LITAF-220ENST00000620789 NKTRP30414 1462 aaKnown RBP26.66■■□□□ 1.86
LITAF-220ENST00000620789 MYOM2P54296 1465 aa26.65■■□□□ 1.86
LITAF-220ENST00000620789 SETD1AO15047 1707 aaKnown RBP26.64■■□□□ 1.85
LITAF-220ENST00000620789 ALKQ9UM73 1620 aa26.64■■□□□ 1.85
LITAF-220ENST00000620789 METP08581 1390 aa26.62■■□□□ 1.85
LITAF-220ENST00000620789 PIK3C2GO75747 1445 aa26.62■■□□□ 1.85
LITAF-220ENST00000620789 FBXO41Q8TF61 875 aa26.61■■□□□ 1.85
LITAF-220ENST00000620789 PTPRUQ92729 1446 aa26.61■■□□□ 1.85
LITAF-220ENST00000620789 NRXN1Q9ULB1 1477 aa26.61■■□□□ 1.85
LITAF-220ENST00000620789 XRN1Q8IZH2 1706 aaKnown RBP26.58■■□□□ 1.85
LITAF-220ENST00000620789 XIRP1Q702N8 1843 aaKnown RBP26.58■■□□□ 1.84
LITAF-220ENST00000620789 PROSER2Q86WR7 435 aaPredicted RBP26.57■■□□□ 1.84
LITAF-220ENST00000620789 DCAF11Q8TEB1 546 aa26.57■■□□□ 1.84
LITAF-220ENST00000620789 AMOTL2Q9Y2J4 779 aa26.57■■□□□ 1.84
LITAF-220ENST00000620789 TMEM94Q12767 1356 aa26.56■■□□□ 1.84
LITAF-220ENST00000620789 STAC3Q96MF2 364 aa26.55■■□□□ 1.84
LITAF-220ENST00000620789 SIN3AQ96ST3 1273 aa26.55■■□□□ 1.84
LITAF-220ENST00000620789 LAMC1P11047 1609 aa26.52■■□□□ 1.84
LITAF-220ENST00000620789 KDM2AQ9Y2K7 1162 aa26.52■■□□□ 1.84
LITAF-220ENST00000620789 ILDR1Q86SU0 546 aaPredicted RBP26.5■■□□□ 1.83
LITAF-220ENST00000620789 RBM33Q96EV2 1170 aaKnown RBP26.5■■□□□ 1.83
LITAF-220ENST00000620789 ASXL1Q8IXJ9 1541 aa26.49■■□□□ 1.83
LITAF-220ENST00000620789 UBAP1LF5GYI3 381 aa26.49■■□□□ 1.83
LITAF-220ENST00000620789 NEUROD1Q13562 356 aa26.49■■□□□ 1.83
LITAF-220ENST00000620789 C14orf93Q9H972 538 aaKnown RBP26.49■■□□□ 1.83
LITAF-220ENST00000620789 PRAG1Q86YV5 1406 aa26.48■■□□□ 1.83
LITAF-220ENST00000620789 NCOA3Q9Y6Q9 1424 aa26.48■■□□□ 1.83
LITAF-220ENST00000620789 CFAP70Q5T0N1 1121 aa26.46■■□□□ 1.83
LITAF-220ENST00000620789 PTCH1Q13635 1447 aa26.46■■□□□ 1.83
LITAF-220ENST00000620789 TOM1O60784 492 aa26.44■■□□□ 1.82
LITAF-220ENST00000620789 TMEM132EQ6IEE7 984 aa26.43■■□□□ 1.82
LITAF-220ENST00000620789 L3MBTL2Q969R5 705 aa26.43■■□□□ 1.82
LITAF-220ENST00000620789 LRPPRCP42704 1394 aaKnown RBP26.43■■□□□ 1.82
LITAF-220ENST00000620789 MSH6P52701 1360 aa26.43■■□□□ 1.82
LITAF-220ENST00000620789 ROBO2Q9HCK4 1378 aa26.41■■□□□ 1.82
LITAF-220ENST00000620789 TECPR2O15040 1411 aa26.4■■□□□ 1.82
LITAF-220ENST00000620789 YTHDC2Q9H6S0 1430 aaKnown RBP26.4■■□□□ 1.82
LITAF-220ENST00000620789 KNDC1Q76NI1 1749 aa26.4■■□□□ 1.82
LITAF-220ENST00000620789 C14orf37Q86TY3 774 aa26.4■■□□□ 1.82
LITAF-220ENST00000620789 ADGRB1O14514 1584 aa26.39■■□□□ 1.82
LITAF-220ENST00000620789 ABCC11Q96J66 1382 aa26.39■■□□□ 1.82
LITAF-220ENST00000620789 STK26Q9P289 416 aa26.38■■□□□ 1.81
LITAF-220ENST00000620789 C19orf44Q9H6X5 657 aa26.36■■□□□ 1.81
LITAF-220ENST00000620789 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.36■■□□□ 1.81
LITAF-220ENST00000620789 KIAA1210Q9ULL0 1709 aa26.36■■□□□ 1.81
LITAF-220ENST00000620789 PIP4K2BP78356 416 aa26.35■■□□□ 1.81
LITAF-220ENST00000620789 ADGRL3Q9HAR2 1447 aa26.35■■□□□ 1.81
LITAF-220ENST00000620789 NALCNQ8IZF0 1738 aa26.34■■□□□ 1.81
LITAF-220ENST00000620789 TONSLQ96HA7 1378 aa26.33■■□□□ 1.81
LITAF-220ENST00000620789 SCAF1Q9H7N4 1312 aaKnown RBP26.33■■□□□ 1.81
LITAF-220ENST00000620789 CLSPNQ9HAW4 1339 aa26.33■■□□□ 1.81
LITAF-220ENST00000620789 DCCP43146 1447 aa26.32■■□□□ 1.8
LITAF-220ENST00000620789 FAM135BQ49AJ0 1406 aa26.31■■□□□ 1.8
LITAF-220ENST00000620789 CADPS2Q86UW7 1296 aa26.3■■□□□ 1.8
LITAF-220ENST00000620789 DLC1Q96QB1 1528 aa26.29■■□□□ 1.8
LITAF-220ENST00000620789 ATF3P18847 181 aa26.29■■□□□ 1.8
LITAF-220ENST00000620789 SIRT1Q96EB6 747 aa26.29■■□□□ 1.8
LITAF-220ENST00000620789 WAPLQ7Z5K2 1190 aa26.28■■□□□ 1.8
LITAF-220ENST00000620789 PLEKHH1Q9ULM0 1364 aa26.27■■□□□ 1.8
LITAF-220ENST00000620789 SLAIN2Q9P270 581 aa26.26■■□□□ 1.79
LITAF-220ENST00000620789 CCER1Q8TC90 406 aaPredicted RBP26.25■■□□□ 1.79
LITAF-220ENST00000620789 TRPM1Q7Z4N2 1603 aa26.25■■□□□ 1.79
LITAF-220ENST00000620789 NBPF1Q3BBV0 1214 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms