RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 PROSER2Q86WR7 435 aaPredicted RBP34.06■■■■□ 3.04
SRRT-218ENST00000620394 MSH6P52701 1360 aa34.04■■■■□ 3.04
SRRT-218ENST00000620394 PHLPP1O60346 1717 aa34.04■■■■□ 3.04
SRRT-218ENST00000620394 GCC2Q8IWJ2 1684 aa34.03■■■■□ 3.04
SRRT-218ENST00000620394 UNC13BO14795 1591 aa34.03■■■■□ 3.04
SRRT-218ENST00000620394 MYO5BQ9ULV0 1848 aa34.03■■■■□ 3.04
SRRT-218ENST00000620394 SLC52A1Q9NWF4 448 aa34.03■■■■□ 3.04
SRRT-218ENST00000620394 CHD2O14647 1828 aaKnown RBP34.02■■■■□ 3.04
SRRT-218ENST00000620394 ZFYVE9O95405 1425 aa33.99■■■■□ 3.03
SRRT-218ENST00000620394 ROCK1Q13464 1354 aa33.98■■■■□ 3.03
SRRT-218ENST00000620394 RBM33Q96EV2 1170 aaKnown RBP33.97■■■■□ 3.03
SRRT-218ENST00000620394 PLEKHG1Q9ULL1 1385 aa33.97■■■■□ 3.03
SRRT-218ENST00000620394 POTEAQ6S8J7 498 aa33.96■■■■□ 3.03
SRRT-218ENST00000620394 TMEM131LA2VDJ0 1609 aa33.94■■■■□ 3.02
SRRT-218ENST00000620394 BCANQ96GW7 911 aa33.94■■■■□ 3.02
SRRT-218ENST00000620394 COL16A1Q07092 1604 aaPredicted RBP33.92■■■■□ 3.02
SRRT-218ENST00000620394 SETD1AO15047 1707 aaKnown RBP33.91■■■■□ 3.02
SRRT-218ENST00000620394 RIMS2Q9UQ26 1411 aa33.91■■■■□ 3.02
SRRT-218ENST00000620394 JCADQ9P266 1359 aa33.91■■■■□ 3.02
SRRT-218ENST00000620394 SLAIN2Q9P270 581 aa33.88■■■■□ 3.01
SRRT-218ENST00000620394 IQGAP3Q86VI3 1631 aa33.88■■■■□ 3.01
SRRT-218ENST00000620394 DIP2AQ14689 1571 aa33.88■■■■□ 3.01
SRRT-218ENST00000620394 PPP1R15AO75807 674 aaPredicted RBP33.87■■■■□ 3.01
SRRT-218ENST00000620394 NCOA3Q9Y6Q9 1424 aa33.87■■■■□ 3.01
SRRT-218ENST00000620394 HDGFP51858 240 aaKnown RBP33.85■■■■□ 3.01
SRRT-218ENST00000620394 E9PCH4 1651 aa33.84■■■■□ 3.01
SRRT-218ENST00000620394 AHDC1Q5TGY3 1603 aaPredicted RBP33.79■■■■□ 3
SRRT-218ENST00000620394 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.79■■■■□ 3
SRRT-218ENST00000620394 TBX22Q9Y458 520 aa33.78■■■■□ 3
SRRT-218ENST00000620394 SHPRHQ149N8 1683 aa33.77■■■■□ 3
SRRT-218ENST00000620394 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.76■■■□□ 2.99
SRRT-218ENST00000620394 ADAMTS13Q76LX8 1427 aa33.76■■■□□ 2.99
SRRT-218ENST00000620394 PIK3R4Q99570 1358 aa33.75■■■□□ 2.99
SRRT-218ENST00000620394 RRBP1Q9P2E9 1410 aaKnown RBP33.75■■■□□ 2.99
SRRT-218ENST00000620394 SPATA31A6Q5VVP1 1343 aa33.75■■■□□ 2.99
SRRT-218ENST00000620394 LRP6O75581 1613 aa33.75■■■□□ 2.99
SRRT-218ENST00000620394 TRPM2O94759 1503 aa33.73■■■□□ 2.99
SRRT-218ENST00000620394 PPARGC1BQ86YN6 1023 aaKnown RBP33.72■■■□□ 2.99
SRRT-218ENST00000620394 C14orf37Q86TY3 774 aa33.71■■■□□ 2.99
SRRT-218ENST00000620394 CADPS2Q86UW7 1296 aa33.69■■■□□ 2.98
SRRT-218ENST00000620394 CHGAP10645 457 aaKnown RBP33.67■■■□□ 2.98
SRRT-218ENST00000620394 NUP155O75694 1391 aa33.65■■■□□ 2.98
SRRT-218ENST00000620394 ITGAEP38570 1179 aa33.65■■■□□ 2.98
SRRT-218ENST00000620394 C19orf44Q9H6X5 657 aa33.65■■■□□ 2.98
SRRT-218ENST00000620394 ATF3P18847 181 aa33.64■■■□□ 2.98
SRRT-218ENST00000620394 MEX3CQ5U5Q3 659 aaKnown RBP33.63■■■□□ 2.97
SRRT-218ENST00000620394 DCCP43146 1447 aa33.62■■■□□ 2.97
SRRT-218ENST00000620394 ZNF772Q68DY9 489 aaPredicted RBP33.62■■■□□ 2.97
SRRT-218ENST00000620394 XRN1Q8IZH2 1706 aaKnown RBP33.62■■■□□ 2.97
SRRT-218ENST00000620394 SPHKAPQ2M3C7 1700 aa33.6■■■□□ 2.97
SRRT-218ENST00000620394 NUTM2DQ5VT03 806 aaPredicted RBP33.59■■■□□ 2.97
SRRT-218ENST00000620394 NRXN3Q9Y4C0 1643 aa33.58■■■□□ 2.97
SRRT-218ENST00000620394 SETBP1Q9Y6X0 1596 aa33.57■■■□□ 2.96
SRRT-218ENST00000620394 PTPRUQ92729 1446 aa33.56■■■□□ 2.96
SRRT-218ENST00000620394 ASXL1Q8IXJ9 1541 aa33.55■■■□□ 2.96
SRRT-218ENST00000620394 NHSL1Q5SYE7 1610 aa33.55■■■□□ 2.96
SRRT-218ENST00000620394 NAIPQ13075 1403 aa33.53■■■□□ 2.96
SRRT-218ENST00000620394 AMOTL2Q9Y2J4 779 aa33.53■■■□□ 2.96
SRRT-218ENST00000620394 BRINP3Q76B58 766 aa33.52■■■□□ 2.96
SRRT-218ENST00000620394 CDK12Q9NYV4 1490 aaPredicted RBP33.5■■■□□ 2.95
SRRT-218ENST00000620394 TRIM52Q96A61 297 aa33.48■■■□□ 2.95
SRRT-218ENST00000620394 SETD5Q9C0A6 1442 aa33.47■■■□□ 2.95
SRRT-218ENST00000620394 UPF1Q92900 1129 aaKnown RBP eCLIP33.47■■■□□ 2.95
SRRT-218ENST00000620394 MST1RQ04912 1400 aa33.46■■■□□ 2.95
SRRT-218ENST00000620394 HFM1A2PYH4 1435 aa33.45■■■□□ 2.94
SRRT-218ENST00000620394 RXRBP28702 533 aa33.42■■■□□ 2.94
SRRT-218ENST00000620394 NALCNQ8IZF0 1738 aa33.41■■■□□ 2.94
SRRT-218ENST00000620394 CLTCL1P53675 1640 aa33.4■■■□□ 2.94
SRRT-218ENST00000620394 ADGRL3Q9HAR2 1447 aa33.4■■■□□ 2.94
SRRT-218ENST00000620394 NUTM2BA6NNL0 878 aaPredicted RBP33.39■■■□□ 2.94
SRRT-218ENST00000620394 NUTM2EB1AL46 878 aaPredicted RBP33.39■■■□□ 2.94
SRRT-218ENST00000620394 NUTM2AQ8IVF1 878 aaPredicted RBP33.39■■■□□ 2.94
SRRT-218ENST00000620394 AFF2P51816 1311 aa33.35■■■□□ 2.93
SRRT-218ENST00000620394 NEXMIFQ5QGS0 1516 aa33.35■■■□□ 2.93
SRRT-218ENST00000620394 METP08581 1390 aa33.34■■■□□ 2.93
SRRT-218ENST00000620394 LRRC59Q96AG4 307 aaKnown RBP33.32■■■□□ 2.92
SRRT-218ENST00000620394 KIF1BO60333 1816 aa33.32■■■□□ 2.92
SRRT-218ENST00000620394 ZNF326Q5BKZ1 582 aaKnown RBP33.31■■■□□ 2.92
SRRT-218ENST00000620394 LAMC1P11047 1609 aa33.3■■■□□ 2.92
SRRT-218ENST00000620394 PNPLA6Q8IY17 1366 aa33.3■■■□□ 2.92
SRRT-218ENST00000620394 RGS12O14924 1447 aa33.28■■■□□ 2.92
SRRT-218ENST00000620394 PTCH1Q13635 1447 aa33.24■■■□□ 2.91
SRRT-218ENST00000620394 C8orf37Q96NL8 207 aa33.23■■■□□ 2.91
SRRT-218ENST00000620394 C1orf167Q5SNV9 1468 aa33.21■■■□□ 2.91
SRRT-218ENST00000620394 RBM6P78332 1123 aaKnown RBP33.2■■■□□ 2.91
SRRT-218ENST00000620394 DDX17Q92841 729 aaKnown RBP33.18■■■□□ 2.9
SRRT-218ENST00000620394 PRAG1Q86YV5 1406 aa33.18■■■□□ 2.9
SRRT-218ENST00000620394 QTRT2Q9H974 415 aaKnown RBP33.15■■■□□ 2.9
SRRT-218ENST00000620394 COL22A1Q8NFW1 1626 aaPredicted RBP33.12■■■□□ 2.89
SRRT-218ENST00000620394 SLC4A1APQ9BWU0 796 aaKnown RBP33.11■■■□□ 2.89
SRRT-218ENST00000620394 PPLO60437 1756 aa33.11■■■□□ 2.89
SRRT-218ENST00000620394 SOS2Q07890 1332 aaPredicted RBP33.09■■■□□ 2.89
SRRT-218ENST00000620394 NGLY1Q96IV0 654 aa33.09■■■□□ 2.89
SRRT-218ENST00000620394 ROBO2Q9HCK4 1378 aa33.09■■■□□ 2.89
SRRT-218ENST00000620394 ADAMTS2O95450 1211 aa33.07■■■□□ 2.88
SRRT-218ENST00000620394 ATAD2Q6PL18 1390 aa33.06■■■□□ 2.88
SRRT-218ENST00000620394 VGFO15240 615 aaPredicted RBP33.04■■■□□ 2.88
SRRT-218ENST00000620394 CDC42BPGQ6DT37 1551 aa33.04■■■□□ 2.88
SRRT-218ENST00000620394 ORAI2Q96SN7 254 aa33.01■■■□□ 2.87
SRRT-218ENST00000620394 RPGRIP1LQ68CZ1 1315 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms