RNA–Protein interactions for RNA: ENST00000619559.4

LCK-214, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-214ENST00000619559 ABCA6Q8N139 1617 aa28.61■■■□□ 2.17
LCK-214ENST00000619559 MLH3Q9UHC1 1453 aa28.61■■■□□ 2.17
LCK-214ENST00000619559 UGGT1Q9NYU2 1555 aa28.61■■■□□ 2.17
LCK-214ENST00000619559 INSRP06213 1382 aa28.61■■■□□ 2.17
LCK-214ENST00000619559 EIF3AQ14152 1382 aaKnown RBP28.6■■■□□ 2.17
LCK-214ENST00000619559 CDCA8Q53HL2 280 aa28.59■■■□□ 2.17
LCK-214ENST00000619559 FRMPD1Q5SYB0 1578 aa28.58■■■□□ 2.17
LCK-214ENST00000619559 MYOM1P52179 1685 aa28.57■■■□□ 2.16
LCK-214ENST00000619559 CC2D1BQ5T0F9 858 aaKnown RBP28.57■■■□□ 2.16
LCK-214ENST00000619559 RBM19Q9Y4C8 960 aaKnown RBP28.57■■■□□ 2.16
LCK-214ENST00000619559 KDM5AP29375 1690 aaKnown RBP28.55■■■□□ 2.16
LCK-214ENST00000619559 ADGRB3O60242 1522 aa28.53■■■□□ 2.16
LCK-214ENST00000619559 NRXN1Q9ULB1 1477 aa28.52■■■□□ 2.16
LCK-214ENST00000619559 BLMP54132 1417 aaPredicted RBP28.51■■■□□ 2.15
LCK-214ENST00000619559 NEO1Q92859 1461 aa28.5■■■□□ 2.15
LCK-214ENST00000619559 MYO3AQ8NEV4 1616 aa28.49■■■□□ 2.15
LCK-214ENST00000619559 MYT1Q01538 1121 aa28.49■■■□□ 2.15
LCK-214ENST00000619559 PDE3BQ13370 1112 aa28.48■■■□□ 2.15
LCK-214ENST00000619559 SENP3-EIF4A1A0A087X0R7 540 aa28.47■■■□□ 2.15
LCK-214ENST00000619559 SLC24A1O60721 1099 aa28.47■■■□□ 2.15
LCK-214ENST00000619559 PPLO60437 1756 aa28.47■■■□□ 2.15
LCK-214ENST00000619559 ADGRF5Q8IZF2 1346 aa28.46■■■□□ 2.15
LCK-214ENST00000619559 B4GALNT3Q6L9W6 998 aa28.46■■■□□ 2.15
LCK-214ENST00000619559 KNSTRNQ9Y448 316 aa28.46■■■□□ 2.15
LCK-214ENST00000619559 ASXL1Q8IXJ9 1541 aa28.46■■■□□ 2.15
LCK-214ENST00000619559 SETBP1Q9Y6X0 1596 aa28.45■■■□□ 2.15
LCK-214ENST00000619559 CFAP70Q5T0N1 1121 aa28.44■■■□□ 2.14
LCK-214ENST00000619559 NPATQ14207 1427 aa28.44■■■□□ 2.14
LCK-214ENST00000619559 CFAP65Q6ZU64 1925 aaKnown RBP28.44■■■□□ 2.14
LCK-214ENST00000619559 ABCC3O15438 1527 aa28.43■■■□□ 2.14
LCK-214ENST00000619559 CAMSAP1Q5T5Y3 1602 aa28.43■■■□□ 2.14
LCK-214ENST00000619559 NPC1L1Q9UHC9 1359 aa28.42■■■□□ 2.14
LCK-214ENST00000619559 AMER1Q5JTC6 1135 aaPredicted RBP28.41■■■□□ 2.14
LCK-214ENST00000619559 ERVK-7P63135 1459 aa28.41■■■□□ 2.14
LCK-214ENST00000619559 NOS1P29475 1434 aa28.4■■■□□ 2.14
LCK-214ENST00000619559 DIP2CQ9Y2E4 1556 aa28.39■■■□□ 2.13
LCK-214ENST00000619559 RICTORQ6R327 1708 aa28.38■■■□□ 2.13
LCK-214ENST00000619559 PPP2R1AP30153 589 aa28.37■■■□□ 2.13
LCK-214ENST00000619559 SBNO2Q9Y2G9 1366 aa28.36■■■□□ 2.13
LCK-214ENST00000619559 GGT6Q6P531 493 aa28.36■■■□□ 2.13
LCK-214ENST00000619559 ZC3H13Q5T200 1668 aaKnown RBP28.35■■■□□ 2.13
LCK-214ENST00000619559 PIK3C2GO75747 1445 aa28.35■■■□□ 2.13
LCK-214ENST00000619559 SIGLEC1Q9BZZ2 1709 aa28.34■■■□□ 2.13
LCK-214ENST00000619559 PIK3C2BO00750 1634 aa28.33■■■□□ 2.13
LCK-214ENST00000619559 SALL2Q9Y467 1007 aaPredicted RBP28.33■■■□□ 2.13
LCK-214ENST00000619559 RPGRIP1LQ68CZ1 1315 aa28.32■■■□□ 2.12
LCK-214ENST00000619559 RRP1P56182 461 aaKnown RBP28.32■■■□□ 2.12
LCK-214ENST00000619559 RCAN3Q9UKA8 241 aa28.31■■■□□ 2.12
LCK-214ENST00000619559 CHGAP10645 457 aaKnown RBP28.31■■■□□ 2.12
LCK-214ENST00000619559 QRICH2Q9H0J4 1663 aa28.29■■■□□ 2.12
LCK-214ENST00000619559 CCDC136Q96JN2 1154 aa28.28■■■□□ 2.12
LCK-214ENST00000619559 ADGRB1O14514 1584 aa28.28■■■□□ 2.12
LCK-214ENST00000619559 RAPGEF3O95398 923 aa28.27■■■□□ 2.12
LCK-214ENST00000619559 C14orf93Q9H972 538 aaKnown RBP28.27■■■□□ 2.12
LCK-214ENST00000619559 GLI2P10070 1586 aa28.26■■■□□ 2.12
LCK-214ENST00000619559 ADAMTS8Q9UP79 889 aa28.26■■■□□ 2.11
LCK-214ENST00000619559 CENPJQ9HC77 1338 aaPredicted RBP28.26■■■□□ 2.11
LCK-214ENST00000619559 WDR43Q15061 677 aaKnown RBP eCLIP28.25■■■□□ 2.11
LCK-214ENST00000619559 ARHGAP31Q2M1Z3 1444 aa28.25■■■□□ 2.11
LCK-214ENST00000619559 FANCIQ9NVI1 1328 aa28.25■■■□□ 2.11
LCK-214ENST00000619559 CDCA7LQ96GN5 454 aa28.24■■■□□ 2.11
LCK-214ENST00000619559 NEXMIFQ5QGS0 1516 aa28.2■■■□□ 2.11
LCK-214ENST00000619559 ANP32EQ9BTT0 268 aa28.19■■■□□ 2.1
LCK-214ENST00000619559 CARD14Q9BXL6 1004 aa28.16■■■□□ 2.1
LCK-214ENST00000619559 ARHGEF28Q8N1W1 1705 aaKnown RBP28.15■■■□□ 2.1
LCK-214ENST00000619559 YEATS2Q9ULM3 1422 aa28.15■■■□□ 2.1
LCK-214ENST00000619559 TRAK1Q9UPV9 953 aa28.15■■■□□ 2.1
LCK-214ENST00000619559 PREX1Q8TCU6 1659 aa28.14■■■□□ 2.09
LCK-214ENST00000619559 EXOC6Q8TAG9 804 aa28.13■■■□□ 2.09
LCK-214ENST00000619559 USP32Q8NFA0 1604 aa28.13■■■□□ 2.09
LCK-214ENST00000619559 PLEKHH1Q9ULM0 1364 aa28.12■■■□□ 2.09
LCK-214ENST00000619559 VGFO15240 615 aaPredicted RBP28.11■■■□□ 2.09
LCK-214ENST00000619559 MYO5BQ9ULV0 1848 aa28.11■■■□□ 2.09
LCK-214ENST00000619559 ZNF521Q96K83 1311 aa28.1■■■□□ 2.09
LCK-214ENST00000619559 ZFYVE9O95405 1425 aa28.09■■■□□ 2.09
LCK-214ENST00000619559 TMEM132EQ6IEE7 984 aa28.08■■■□□ 2.09
LCK-214ENST00000619559 NSD3Q9BZ95 1437 aa28.07■■■□□ 2.08
LCK-214ENST00000619559 PUS7Q96PZ0 661 aaKnown RBP28.06■■■□□ 2.08
LCK-214ENST00000619559 SLC52A1Q9NWF4 448 aa28.06■■■□□ 2.08
LCK-214ENST00000619559 TMEM131LA2VDJ0 1609 aa28.05■■■□□ 2.08
LCK-214ENST00000619559 RIMBP3CA6NJZ7 1639 aa28.04■■■□□ 2.08
LCK-214ENST00000619559 RIMBP3BA6NNM3 1639 aa28.04■■■□□ 2.08
LCK-214ENST00000619559 RIMBP3Q9UFD9 1639 aa28.04■■■□□ 2.08
LCK-214ENST00000619559 DIP2BQ9P265 1576 aa28.04■■■□□ 2.08
LCK-214ENST00000619559 POLR3AO14802 1390 aaPredicted RBP28.04■■■□□ 2.08
LCK-214ENST00000619559 MSH5O43196 834 aa28.04■■■□□ 2.08
LCK-214ENST00000619559 GOLGA2Q08379 1002 aa28.03■■■□□ 2.08
LCK-214ENST00000619559 IDI1Q13907 227 aa28.03■■■□□ 2.08
LCK-214ENST00000619559 TULP4Q9NRJ4 1543 aa28.03■■■□□ 2.08
LCK-214ENST00000619559 DUSP27Q5VZP5 1158 aa28.03■■■□□ 2.08
LCK-214ENST00000619559 CYB5RLQ6IPT4 315 aa28.01■■■□□ 2.07
LCK-214ENST00000619559 SHPRHQ149N8 1683 aa28■■■□□ 2.07
LCK-214ENST00000619559 REREQ9P2R6 1566 aa27.99■■■□□ 2.07
LCK-214ENST00000619559 EVC2Q86UK5 1308 aa27.99■■■□□ 2.07
LCK-214ENST00000619559 NGEFQ8N5V2 710 aa27.99■■■□□ 2.07
LCK-214ENST00000619559 SLC12A5Q9H2X9 1139 aa27.99■■■□□ 2.07
LCK-214ENST00000619559 NUTM2DQ5VT03 806 aaPredicted RBP27.98■■■□□ 2.07
LCK-214ENST00000619559 CCDC146Q8IYE0 955 aa27.98■■■□□ 2.07
LCK-214ENST00000619559 PLIN1O60240 522 aa27.97■■■□□ 2.07
LCK-214ENST00000619559 SLFN5Q08AF3 891 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms