RNA–Protein interactions for RNA: ENST00000618698.4

CPEB1-217, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 2

Gene CPEB1, Length 2,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-217ENST00000618698 ERICH6Q7L0X2 663 aa13.33□□□□□ -0.28
CPEB1-217ENST00000618698 UBR1Q8IWV7 1749 aa13.32□□□□□ -0.28
CPEB1-217ENST00000618698 TIMELESSQ9UNS1 1208 aa13.32□□□□□ -0.28
CPEB1-217ENST00000618698 CEBPAP49715 358 aaPredicted RBP13.31□□□□□ -0.28
CPEB1-217ENST00000618698 IDI1Q13907 227 aa13.3□□□□□ -0.28
CPEB1-217ENST00000618698 PPLO60437 1756 aa13.3□□□□□ -0.28
CPEB1-217ENST00000618698 CEP170BQ9Y4F5 1589 aaPredicted RBP13.28□□□□□ -0.28
CPEB1-217ENST00000618698 A2ML1A8K2U0 1454 aa13.28□□□□□ -0.28
CPEB1-217ENST00000618698 NEXMIFQ5QGS0 1516 aa13.27□□□□□ -0.29
CPEB1-217ENST00000618698 DDX10Q13206 875 aaKnown RBP13.26□□□□□ -0.29
CPEB1-217ENST00000618698 MYOM2P54296 1465 aa13.25□□□□□ -0.29
CPEB1-217ENST00000618698 TONSLQ96HA7 1378 aa13.25□□□□□ -0.29
CPEB1-217ENST00000618698 ARHGAP23Q9P227 1491 aa13.24□□□□□ -0.29
CPEB1-217ENST00000618698 NRXN1Q9ULB1 1477 aa13.24□□□□□ -0.29
CPEB1-217ENST00000618698 SLIT1O75093 1534 aa13.24□□□□□ -0.29
CPEB1-217ENST00000618698 DEKP35659 375 aaKnown RBP13.24□□□□□ -0.29
CPEB1-217ENST00000618698 L3MBTL2Q969R5 705 aa13.24□□□□□ -0.29
CPEB1-217ENST00000618698 RPGRIP1LQ68CZ1 1315 aa13.24□□□□□ -0.29
CPEB1-217ENST00000618698 FANCIQ9NVI1 1328 aa13.24□□□□□ -0.29
CPEB1-217ENST00000618698 ZFYVE9O95405 1425 aa13.24□□□□□ -0.29
CPEB1-217ENST00000618698 UHRF1BP1Q6BDS2 1440 aa13.24□□□□□ -0.29
CPEB1-217ENST00000618698 STAC3Q96MF2 364 aa13.23□□□□□ -0.29
CPEB1-217ENST00000618698 KIAA1210Q9ULL0 1709 aa13.21□□□□□ -0.3
CPEB1-217ENST00000618698 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
CPEB1-217ENST00000618698 ANO8Q9HCE9 1232 aaPredicted RBP13.2□□□□□ -0.3
CPEB1-217ENST00000618698 TMEM2Q9UHN6 1383 aa13.2□□□□□ -0.3
CPEB1-217ENST00000618698 PRAG1Q86YV5 1406 aa13.19□□□□□ -0.3
CPEB1-217ENST00000618698 RIMS2Q9UQ26 1411 aa13.19□□□□□ -0.3
CPEB1-217ENST00000618698 IRX6P78412 446 aaPredicted RBP13.18□□□□□ -0.3
CPEB1-217ENST00000618698 TRPM1Q7Z4N2 1603 aa13.18□□□□□ -0.3
CPEB1-217ENST00000618698 RGL3Q3MIN7 710 aa13.18□□□□□ -0.3
CPEB1-217ENST00000618698 LMTK3Q96Q04 1460 aa13.18□□□□□ -0.3
CPEB1-217ENST00000618698 SETD1AO15047 1707 aaKnown RBP13.17□□□□□ -0.3
CPEB1-217ENST00000618698 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
CPEB1-217ENST00000618698 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
CPEB1-217ENST00000618698 POLR1AO95602 1720 aaPredicted RBP13.17□□□□□ -0.3
CPEB1-217ENST00000618698 LAMC1P11047 1609 aa13.17□□□□□ -0.3
CPEB1-217ENST00000618698 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
CPEB1-217ENST00000618698 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
CPEB1-217ENST00000618698 SETBP1Q9Y6X0 1596 aa13.16□□□□□ -0.3
CPEB1-217ENST00000618698 PLPPR3Q6T4P5 718 aa13.16□□□□□ -0.3
CPEB1-217ENST00000618698 CHGAP10645 457 aaKnown RBP13.15□□□□□ -0.3
CPEB1-217ENST00000618698 RALGAPBQ86X10 1494 aa13.15□□□□□ -0.3
CPEB1-217ENST00000618698 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
CPEB1-217ENST00000618698 NBPF8Q3BBV2 869 aa13.14□□□□□ -0.31
CPEB1-217ENST00000618698 ZNF326Q5BKZ1 582 aaKnown RBP13.14□□□□□ -0.31
CPEB1-217ENST00000618698 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.14□□□□□ -0.31
CPEB1-217ENST00000618698 HIRIP3Q9BW71 556 aaPredicted RBP13.14□□□□□ -0.31
CPEB1-217ENST00000618698 ADGRF5Q8IZF2 1346 aa13.14□□□□□ -0.31
CPEB1-217ENST00000618698 IQGAP1P46940 1657 aa13.14□□□□□ -0.31
CPEB1-217ENST00000618698 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
CPEB1-217ENST00000618698 MED14O60244 1454 aa13.13□□□□□ -0.31
CPEB1-217ENST00000618698 SCAF11Q99590 1463 aaKnown RBP13.13□□□□□ -0.31
CPEB1-217ENST00000618698 PLEKHG1Q9ULL1 1385 aa13.12□□□□□ -0.31
CPEB1-217ENST00000618698 GPRASP1Q5JY77 1395 aa13.12□□□□□ -0.31
CPEB1-217ENST00000618698 LTKP29376 864 aa13.11□□□□□ -0.31
CPEB1-217ENST00000618698 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
CPEB1-217ENST00000618698 ALKQ9UM73 1620 aa13.11□□□□□ -0.31
CPEB1-217ENST00000618698 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
CPEB1-217ENST00000618698 DIP2AQ14689 1571 aa13.11□□□□□ -0.31
CPEB1-217ENST00000618698 STRCQ7RTU9 1775 aa13.11□□□□□ -0.31
CPEB1-217ENST00000618698 NBR1Q14596 966 aa13.1□□□□□ -0.31
CPEB1-217ENST00000618698 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
CPEB1-217ENST00000618698 ASXL1Q8IXJ9 1541 aa13.1□□□□□ -0.31
CPEB1-217ENST00000618698 ADAMTS13Q76LX8 1427 aa13.09□□□□□ -0.31
CPEB1-217ENST00000618698 C14orf93Q9H972 538 aaKnown RBP13.09□□□□□ -0.31
CPEB1-217ENST00000618698 ANP32CO43423 234 aa13.08□□□□□ -0.32
CPEB1-217ENST00000618698 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
CPEB1-217ENST00000618698 EID1Q9Y6B2 187 aa13.07□□□□□ -0.32
CPEB1-217ENST00000618698 TXNDC2Q86VQ3 553 aa13.07□□□□□ -0.32
CPEB1-217ENST00000618698 SALL2Q9Y467 1007 aaPredicted RBP13.07□□□□□ -0.32
CPEB1-217ENST00000618698 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
CPEB1-217ENST00000618698 KNDC1Q76NI1 1749 aa13.06□□□□□ -0.32
CPEB1-217ENST00000618698 NUTM2DQ5VT03 806 aaPredicted RBP13.05□□□□□ -0.32
CPEB1-217ENST00000618698 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
CPEB1-217ENST00000618698 CFAP70Q5T0N1 1121 aa13.04□□□□□ -0.32
CPEB1-217ENST00000618698 CHD2O14647 1828 aaKnown RBP13.03□□□□□ -0.32
CPEB1-217ENST00000618698 ARHGEF28Q8N1W1 1705 aaKnown RBP13.03□□□□□ -0.32
CPEB1-217ENST00000618698 NBPF1Q3BBV0 1214 aa13.03□□□□□ -0.32
CPEB1-217ENST00000618698 AEBP2Q6ZN18 517 aaPredicted RBP13.03□□□□□ -0.32
CPEB1-217ENST00000618698 ROCK2O75116 1388 aaKnown RBP13.03□□□□□ -0.32
CPEB1-217ENST00000618698 TBX22Q9Y458 520 aa13.03□□□□□ -0.32
CPEB1-217ENST00000618698 XRN1Q8IZH2 1706 aaKnown RBP13.02□□□□□ -0.32
CPEB1-217ENST00000618698 HNRNPUQ00839 825 aaKnown RBP eCLIP13.02□□□□□ -0.33
CPEB1-217ENST00000618698 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
CPEB1-217ENST00000618698 PIK3R4Q99570 1358 aa13.02□□□□□ -0.33
CPEB1-217ENST00000618698 DLC1Q96QB1 1528 aa13.02□□□□□ -0.33
CPEB1-217ENST00000618698 TECPR2O15040 1411 aa13.01□□□□□ -0.33
CPEB1-217ENST00000618698 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
CPEB1-217ENST00000618698 HSPA2P54652 639 aa13.01□□□□□ -0.33
CPEB1-217ENST00000618698 NWD1Q149M9 1564 aa13.01□□□□□ -0.33
CPEB1-217ENST00000618698 CPS1P31327 1500 aa13□□□□□ -0.33
CPEB1-217ENST00000618698 METP08581 1390 aa13□□□□□ -0.33
CPEB1-217ENST00000618698 NCKAP5LQ9HCH0 1330 aa13□□□□□ -0.33
CPEB1-217ENST00000618698 NOP58Q9Y2X3 529 aaKnown RBP13□□□□□ -0.33
CPEB1-217ENST00000618698 YTHDC2Q9H6S0 1430 aaKnown RBP13□□□□□ -0.33
CPEB1-217ENST00000618698 LRPPRCP42704 1394 aaKnown RBP12.99□□□□□ -0.33
CPEB1-217ENST00000618698 PTPRUQ92729 1446 aa12.98□□□□□ -0.33
CPEB1-217ENST00000618698 ABCC11Q96J66 1382 aa12.98□□□□□ -0.33
CPEB1-217ENST00000618698 CARD11Q9BXL7 1154 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms