RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 DHX16O60231 1041 aaKnown RBP13.64□□□□□ -0.23
CCDC144B-208ENST00000618081 RNF20Q5VTR2 975 aa13.64□□□□□ -0.23
CCDC144B-208ENST00000618081 FOXD4L5Q5VV16 416 aaPredicted RBP13.64□□□□□ -0.23
CCDC144B-208ENST00000618081 FOXD4L4Q8WXT5 416 aaPredicted RBP13.64□□□□□ -0.23
CCDC144B-208ENST00000618081 TRAK1Q9UPV9 953 aa13.64□□□□□ -0.23
CCDC144B-208ENST00000618081 VGFO15240 615 aaPredicted RBP13.64□□□□□ -0.23
CCDC144B-208ENST00000618081 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
CCDC144B-208ENST00000618081 CPLX1O14810 134 aa13.64□□□□□ -0.23
CCDC144B-208ENST00000618081 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
CCDC144B-208ENST00000618081 CENPQQ7L2Z9 268 aaPredicted RBP13.63□□□□□ -0.23
CCDC144B-208ENST00000618081 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
CCDC144B-208ENST00000618081 MYBBP1AQ9BQG0 1328 aaKnown RBP13.63□□□□□ -0.23
CCDC144B-208ENST00000618081 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
CCDC144B-208ENST00000618081 PSME1Q06323 249 aa13.63□□□□□ -0.23
CCDC144B-208ENST00000618081 SYTL4Q96C24 671 aaPredicted RBP13.63□□□□□ -0.23
CCDC144B-208ENST00000618081 RAPGEF2Q9Y4G8 1499 aa13.62□□□□□ -0.23
CCDC144B-208ENST00000618081 CECR2Q9BXF3 1484 aa13.62□□□□□ -0.23
CCDC144B-208ENST00000618081 ODF2Q5BJF6 829 aa13.62□□□□□ -0.23
CCDC144B-208ENST00000618081 IFIT2P09913 472 aaKnown RBP13.62□□□□□ -0.23
CCDC144B-208ENST00000618081 E9PSI1 815 aa13.61□□□□□ -0.23
CCDC144B-208ENST00000618081 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
CCDC144B-208ENST00000618081 NGEFQ8N5V2 710 aa13.61□□□□□ -0.23
CCDC144B-208ENST00000618081 ZKSCAN2Q63HK3 967 aa13.61□□□□□ -0.23
CCDC144B-208ENST00000618081 NFXL1Q6ZNB6 911 aa13.61□□□□□ -0.23
CCDC144B-208ENST00000618081 AEBP2Q6ZN18 517 aaPredicted RBP13.6□□□□□ -0.23
CCDC144B-208ENST00000618081 R3HCC1Q9Y3T6 440 aaKnown RBP13.6□□□□□ -0.23
CCDC144B-208ENST00000618081 EPS15P42566 896 aa13.6□□□□□ -0.23
CCDC144B-208ENST00000618081 CT47A1Q5JQC4 288 aaPredicted RBP13.6□□□□□ -0.23
CCDC144B-208ENST00000618081 ANO2Q9NQ90 1003 aa13.59□□□□□ -0.23
CCDC144B-208ENST00000618081 DDX49Q9Y6V7 483 aaKnown RBP13.59□□□□□ -0.23
CCDC144B-208ENST00000618081 SAFBQ15424 915 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC144B-208ENST00000618081 RRP12Q5JTH9 1297 aaKnown RBP13.58□□□□□ -0.23
CCDC144B-208ENST00000618081 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.58□□□□□ -0.23
CCDC144B-208ENST00000618081 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.24
CCDC144B-208ENST00000618081 RRP7AQ9Y3A4 280 aaKnown RBP13.58□□□□□ -0.24
CCDC144B-208ENST00000618081 EIF2S2P20042 333 aaKnown RBP13.58□□□□□ -0.24
CCDC144B-208ENST00000618081 BRMS1Q9HCU9 246 aa13.58□□□□□ -0.24
CCDC144B-208ENST00000618081 G3BP1Q13283 466 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC144B-208ENST00000618081 MIA2Q96PC5 1412 aa13.57□□□□□ -0.24
CCDC144B-208ENST00000618081 RDXP35241 583 aaKnown RBP13.57□□□□□ -0.24
CCDC144B-208ENST00000618081 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
CCDC144B-208ENST00000618081 TEX35Q5T0J7 233 aa13.56□□□□□ -0.24
CCDC144B-208ENST00000618081 CDR1P51861 262 aa13.56□□□□□ -0.24
CCDC144B-208ENST00000618081 FAM161AQ3B820 660 aa13.56□□□□□ -0.24
CCDC144B-208ENST00000618081 DDX19BQ9UMR2 479 aa13.56□□□□□ -0.24
CCDC144B-208ENST00000618081 RUFY1Q96T51 708 aa13.56□□□□□ -0.24
CCDC144B-208ENST00000618081 CUX1P39880 1505 aa13.56□□□□□ -0.24
CCDC144B-208ENST00000618081 PANK3Q9H999 370 aa13.56□□□□□ -0.24
CCDC144B-208ENST00000618081 ATF3P18847 181 aa13.55□□□□□ -0.24
CCDC144B-208ENST00000618081 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
CCDC144B-208ENST00000618081 FOXD4L6Q3SYB3 417 aaPredicted RBP13.55□□□□□ -0.24
CCDC144B-208ENST00000618081 FOXD4L3Q6VB84 417 aaPredicted RBP13.55□□□□□ -0.24
CCDC144B-208ENST00000618081 FHOD3Q2V2M9 1422 aa13.55□□□□□ -0.24
CCDC144B-208ENST00000618081 AK7Q96M32 723 aa13.55□□□□□ -0.24
CCDC144B-208ENST00000618081 ERC2O15083 957 aa13.55□□□□□ -0.24
CCDC144B-208ENST00000618081 WWC2Q6AWC2 1192 aa13.55□□□□□ -0.24
CCDC144B-208ENST00000618081 XBP1P17861 261 aa13.55□□□□□ -0.24
CCDC144B-208ENST00000618081 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC144B-208ENST00000618081 HOMER1Q86YM7 354 aa13.54□□□□□ -0.24
CCDC144B-208ENST00000618081 KANK4Q5T7N3 995 aaPredicted RBP13.54□□□□□ -0.24
CCDC144B-208ENST00000618081 PATL2C9JE40 543 aaKnown RBP13.54□□□□□ -0.24
CCDC144B-208ENST00000618081 NINLQ9Y2I6 1382 aa13.54□□□□□ -0.24
CCDC144B-208ENST00000618081 HSP90AB4PQ58FF6 505 aa13.54□□□□□ -0.24
CCDC144B-208ENST00000618081 BICD2Q8TD16 824 aa13.54□□□□□ -0.24
CCDC144B-208ENST00000618081 NAP1L1P55209 391 aaKnown RBP13.53□□□□□ -0.24
CCDC144B-208ENST00000618081 ZNF592Q92610 1267 aa13.53□□□□□ -0.24
CCDC144B-208ENST00000618081 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
CCDC144B-208ENST00000618081 MROH2BQ7Z745 1585 aa13.53□□□□□ -0.24
CCDC144B-208ENST00000618081 ELL2O00472 640 aaPredicted RBP13.53□□□□□ -0.24
CCDC144B-208ENST00000618081 CCDC173Q0VFZ6 552 aa13.52□□□□□ -0.24
CCDC144B-208ENST00000618081 KLHL34Q8N239 644 aa13.52□□□□□ -0.24
CCDC144B-208ENST00000618081 PHF23Q9BUL5 403 aaPredicted RBP13.52□□□□□ -0.24
CCDC144B-208ENST00000618081 MYO6Q9UM54 1294 aa13.52□□□□□ -0.24
CCDC144B-208ENST00000618081 SASS6Q6UVJ0 657 aa13.52□□□□□ -0.24
CCDC144B-208ENST00000618081 NAT10Q9H0A0 1025 aaKnown RBP13.52□□□□□ -0.24
CCDC144B-208ENST00000618081 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
CCDC144B-208ENST00000618081 DIAPH1O60610 1272 aaKnown RBP13.51□□□□□ -0.25
CCDC144B-208ENST00000618081 MINK1Q8N4C8 1332 aaPredicted RBP13.51□□□□□ -0.25
CCDC144B-208ENST00000618081 BCL2L13Q9BXK5 485 aa13.51□□□□□ -0.25
CCDC144B-208ENST00000618081 USP47Q96K76 1375 aa13.51□□□□□ -0.25
CCDC144B-208ENST00000618081 HSP90AA2PQ14568 343 aaPredicted RBP13.51□□□□□ -0.25
CCDC144B-208ENST00000618081 API5Q9BZZ5 524 aaKnown RBP13.51□□□□□ -0.25
CCDC144B-208ENST00000618081 FKBP5Q13451 457 aaPredicted RBP13.51□□□□□ -0.25
CCDC144B-208ENST00000618081 INTS3Q68E01 1043 aaKnown RBP13.51□□□□□ -0.25
CCDC144B-208ENST00000618081 ACBD3Q9H3P7 528 aa13.5□□□□□ -0.25
CCDC144B-208ENST00000618081 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
CCDC144B-208ENST00000618081 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
CCDC144B-208ENST00000618081 ST20-MTHFSA0A0A6YYL1 179 aa13.5□□□□□ -0.25
CCDC144B-208ENST00000618081 CCAR1Q8IX12 1150 aaKnown RBP13.5□□□□□ -0.25
CCDC144B-208ENST00000618081 CCDC27Q2M243 656 aa13.49□□□□□ -0.25
CCDC144B-208ENST00000618081 OLFM4Q6UX06 510 aa13.49□□□□□ -0.25
CCDC144B-208ENST00000618081 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
CCDC144B-208ENST00000618081 HSP90AB2PQ58FF8 381 aa13.49□□□□□ -0.25
CCDC144B-208ENST00000618081 SAMD1Q6SPF0 538 aaPredicted RBP13.49□□□□□ -0.25
CCDC144B-208ENST00000618081 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
CCDC144B-208ENST00000618081 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
CCDC144B-208ENST00000618081 SLC3A2P08195 630 aaKnown RBP13.49□□□□□ -0.25
CCDC144B-208ENST00000618081 RIC3Q7Z5B4 369 aa13.48□□□□□ -0.25
CCDC144B-208ENST00000618081 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
CCDC144B-208ENST00000618081 SART3Q15020 963 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms