RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 ZEB1P37275 1124 aaPredicted RBP22.03■■□□□ 1.12
UPK1A-204ENST00000617999 TIMELESSQ9UNS1 1208 aa22.03■■□□□ 1.12
UPK1A-204ENST00000617999 IQGAP1P46940 1657 aa22.03■■□□□ 1.12
UPK1A-204ENST00000617999 PRAG1Q86YV5 1406 aa22.03■■□□□ 1.12
UPK1A-204ENST00000617999 NRXN3Q9Y4C0 1643 aa22.02■■□□□ 1.12
UPK1A-204ENST00000617999 RIMS2Q9UQ26 1411 aa22.02■■□□□ 1.12
UPK1A-204ENST00000617999 SETD1AO15047 1707 aaKnown RBP22.01■■□□□ 1.11
UPK1A-204ENST00000617999 KIAA1210Q9ULL0 1709 aa22■■□□□ 1.11
UPK1A-204ENST00000617999 LMTK3Q96Q04 1460 aa22■■□□□ 1.11
UPK1A-204ENST00000617999 LAMC1P11047 1609 aa21.99■■□□□ 1.11
UPK1A-204ENST00000617999 ZNF326Q5BKZ1 582 aaKnown RBP21.99■■□□□ 1.11
UPK1A-204ENST00000617999 TMEM2Q9UHN6 1383 aa21.99■■□□□ 1.11
UPK1A-204ENST00000617999 RALGAPBQ86X10 1494 aa21.98■■□□□ 1.11
UPK1A-204ENST00000617999 STAG3Q9UJ98 1225 aa21.98■■□□□ 1.11
UPK1A-204ENST00000617999 PIK3C2GO75747 1445 aa21.97■■□□□ 1.11
UPK1A-204ENST00000617999 DCAF11Q8TEB1 546 aa21.97■■□□□ 1.11
UPK1A-204ENST00000617999 SETBP1Q9Y6X0 1596 aa21.95■■□□□ 1.11
UPK1A-204ENST00000617999 RPGRIP1LQ68CZ1 1315 aa21.95■■□□□ 1.1
UPK1A-204ENST00000617999 ASXL1Q8IXJ9 1541 aa21.95■■□□□ 1.1
UPK1A-204ENST00000617999 PPP1R15AO75807 674 aaPredicted RBP21.94■■□□□ 1.1
UPK1A-204ENST00000617999 NBPF8Q3BBV2 869 aa21.94■■□□□ 1.1
UPK1A-204ENST00000617999 ADGRF5Q8IZF2 1346 aa21.94■■□□□ 1.1
UPK1A-204ENST00000617999 SCAF11Q99590 1463 aaKnown RBP21.94■■□□□ 1.1
UPK1A-204ENST00000617999 KDM2AQ9Y2K7 1162 aa21.93■■□□□ 1.1
UPK1A-204ENST00000617999 NUTM2DQ5VT03 806 aaPredicted RBP21.92■■□□□ 1.1
UPK1A-204ENST00000617999 ALKQ9UM73 1620 aa21.88■■□□□ 1.09
UPK1A-204ENST00000617999 ADGRB1O14514 1584 aa21.88■■□□□ 1.09
UPK1A-204ENST00000617999 STRCQ7RTU9 1775 aa21.87■■□□□ 1.09
UPK1A-204ENST00000617999 DIP2AQ14689 1571 aa21.86■■□□□ 1.09
UPK1A-204ENST00000617999 PLEKHG1Q9ULL1 1385 aa21.86■■□□□ 1.09
UPK1A-204ENST00000617999 THEMISQ8N1K5 641 aaPredicted RBP21.85■■□□□ 1.09
UPK1A-204ENST00000617999 ADAMTS13Q76LX8 1427 aa21.84■■□□□ 1.09
UPK1A-204ENST00000617999 LTKP29376 864 aa21.84■■□□□ 1.09
UPK1A-204ENST00000617999 STAC3Q96MF2 364 aa21.84■■□□□ 1.09
UPK1A-204ENST00000617999 GPRASP1Q5JY77 1395 aa21.83■■□□□ 1.08
UPK1A-204ENST00000617999 VGFO15240 615 aaPredicted RBP21.82■■□□□ 1.08
UPK1A-204ENST00000617999 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.82■■□□□ 1.08
UPK1A-204ENST00000617999 KNDC1Q76NI1 1749 aa21.82■■□□□ 1.08
UPK1A-204ENST00000617999 ARHGEF28Q8N1W1 1705 aaKnown RBP21.82■■□□□ 1.08
UPK1A-204ENST00000617999 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
UPK1A-204ENST00000617999 MED14O60244 1454 aa21.81■■□□□ 1.08
UPK1A-204ENST00000617999 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
UPK1A-204ENST00000617999 HSPA2P54652 639 aa21.79■■□□□ 1.08
UPK1A-204ENST00000617999 TXNDC2Q86VQ3 553 aa21.79■■□□□ 1.08
UPK1A-204ENST00000617999 CFAP70Q5T0N1 1121 aa21.78■■□□□ 1.08
UPK1A-204ENST00000617999 NPHP4O75161 1426 aaPredicted RBP21.78■■□□□ 1.08
UPK1A-204ENST00000617999 EID1Q9Y6B2 187 aa21.77■■□□□ 1.08
UPK1A-204ENST00000617999 XRN1Q8IZH2 1706 aaKnown RBP21.77■■□□□ 1.08
UPK1A-204ENST00000617999 NBPF1Q3BBV0 1214 aa21.76■■□□□ 1.07
UPK1A-204ENST00000617999 C14orf93Q9H972 538 aaKnown RBP21.75■■□□□ 1.07
UPK1A-204ENST00000617999 HDGFP51858 240 aaKnown RBP21.73■■□□□ 1.07
UPK1A-204ENST00000617999 ANKLE2Q86XL3 938 aa21.73■■□□□ 1.07
UPK1A-204ENST00000617999 CPS1P31327 1500 aa21.73■■□□□ 1.07
UPK1A-204ENST00000617999 CHD2O14647 1828 aaKnown RBP21.72■■□□□ 1.07
UPK1A-204ENST00000617999 NWD1Q149M9 1564 aa21.72■■□□□ 1.07
UPK1A-204ENST00000617999 NCKAP5LQ9HCH0 1330 aa21.72■■□□□ 1.07
UPK1A-204ENST00000617999 QRICH2Q9H0J4 1663 aa21.72■■□□□ 1.07
UPK1A-204ENST00000617999 USP47Q96K76 1375 aa21.72■■□□□ 1.07
UPK1A-204ENST00000617999 METP08581 1390 aa21.71■■□□□ 1.07
UPK1A-204ENST00000617999 YTHDC2Q9H6S0 1430 aaKnown RBP21.69■■□□□ 1.06
UPK1A-204ENST00000617999 CARD11Q9BXL7 1154 aa21.68■■□□□ 1.06
UPK1A-204ENST00000617999 PTPRUQ92729 1446 aa21.68■■□□□ 1.06
UPK1A-204ENST00000617999 DLC1Q96QB1 1528 aa21.68■■□□□ 1.06
UPK1A-204ENST00000617999 STRCP1A6NGW2 1772 aa21.68■■□□□ 1.06
UPK1A-204ENST00000617999 TECPR2O15040 1411 aa21.66■■□□□ 1.06
UPK1A-204ENST00000617999 TMEM132EQ6IEE7 984 aa21.66■■□□□ 1.06
UPK1A-204ENST00000617999 LRPPRCP42704 1394 aaKnown RBP21.65■■□□□ 1.06
UPK1A-204ENST00000617999 BCANQ96GW7 911 aa21.65■■□□□ 1.06
UPK1A-204ENST00000617999 SLC26A8Q96RN1 970 aa21.65■■□□□ 1.06
UPK1A-204ENST00000617999 PTCH1Q13635 1447 aa21.61■■□□□ 1.05
UPK1A-204ENST00000617999 EIF3AQ14152 1382 aaKnown RBP21.61■■□□□ 1.05
UPK1A-204ENST00000617999 PIK3R4Q99570 1358 aa21.61■■□□□ 1.05
UPK1A-204ENST00000617999 HSPA5P11021 654 aaKnown RBP21.6■■□□□ 1.05
UPK1A-204ENST00000617999 TBX22Q9Y458 520 aa21.6■■□□□ 1.05
UPK1A-204ENST00000617999 ABCC11Q96J66 1382 aa21.58■■□□□ 1.04
UPK1A-204ENST00000617999 NALCNQ8IZF0 1738 aa21.58■■□□□ 1.04
UPK1A-204ENST00000617999 EIF4G2P78344 907 aaKnown RBP eCLIP21.57■■□□□ 1.04
UPK1A-204ENST00000617999 STK26Q9P289 416 aa21.56■■□□□ 1.04
UPK1A-204ENST00000617999 TRAK1Q9UPV9 953 aa21.56■■□□□ 1.04
UPK1A-204ENST00000617999 ROBO2Q9HCK4 1378 aa21.56■■□□□ 1.04
UPK1A-204ENST00000617999 NKTRP30414 1462 aaKnown RBP21.56■■□□□ 1.04
UPK1A-204ENST00000617999 ADGRB2O60241 1585 aa21.56■■□□□ 1.04
UPK1A-204ENST00000617999 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.55■■□□□ 1.04
UPK1A-204ENST00000617999 HIRIP3Q9BW71 556 aaPredicted RBP21.55■■□□□ 1.04
UPK1A-204ENST00000617999 PLEKHH1Q9ULM0 1364 aa21.55■■□□□ 1.04
UPK1A-204ENST00000617999 TULP4Q9NRJ4 1543 aa21.55■■□□□ 1.04
UPK1A-204ENST00000617999 FAM135BQ49AJ0 1406 aa21.54■■□□□ 1.04
UPK1A-204ENST00000617999 XIRP1Q702N8 1843 aaKnown RBP21.52■■□□□ 1.04
UPK1A-204ENST00000617999 SBNO2Q9Y2G9 1366 aa21.52■■□□□ 1.04
UPK1A-204ENST00000617999 ST20-MTHFSA0A0A6YYL1 179 aa21.52■■□□□ 1.04
UPK1A-204ENST00000617999 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
UPK1A-204ENST00000617999 CENPJQ9HC77 1338 aaPredicted RBP21.51■■□□□ 1.03
UPK1A-204ENST00000617999 MYOM1P52179 1685 aa21.5■■□□□ 1.03
UPK1A-204ENST00000617999 KCNA6P17658 529 aa21.49■■□□□ 1.03
UPK1A-204ENST00000617999 TESK2Q96S53 571 aa21.49■■□□□ 1.03
UPK1A-204ENST00000617999 AMOTL2Q9Y2J4 779 aa21.49■■□□□ 1.03
UPK1A-204ENST00000617999 PRAM1Q96QH2 718 aa21.48■■□□□ 1.03
UPK1A-204ENST00000617999 DISP3Q9P2K9 1392 aa21.48■■□□□ 1.03
UPK1A-204ENST00000617999 CDC42BPGQ6DT37 1551 aa21.45■■□□□ 1.02
UPK1A-204ENST00000617999 FMN2Q9NZ56 1722 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms