RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 NCKAP5LQ9HCH0 1330 aa22.59■■□□□ 1.21
PCDHGC3-204ENST00000617222 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.59■■□□□ 1.21
PCDHGC3-204ENST00000617222 PPP1R15AO75807 674 aaPredicted RBP22.58■■□□□ 1.21
PCDHGC3-204ENST00000617222 ARHGAP23Q9P227 1491 aa22.58■■□□□ 1.2
PCDHGC3-204ENST00000617222 KDM5AP29375 1690 aaKnown RBP22.58■■□□□ 1.2
PCDHGC3-204ENST00000617222 DCAF11Q8TEB1 546 aa22.57■■□□□ 1.2
PCDHGC3-204ENST00000617222 L3MBTL2Q969R5 705 aa22.57■■□□□ 1.2
PCDHGC3-204ENST00000617222 KDM2AQ9Y2K7 1162 aa22.57■■□□□ 1.2
PCDHGC3-204ENST00000617222 SLIT1O75093 1534 aa22.57■■□□□ 1.2
PCDHGC3-204ENST00000617222 MYO5BQ9ULV0 1848 aa22.56■■□□□ 1.2
PCDHGC3-204ENST00000617222 ZFYVE9O95405 1425 aa22.56■■□□□ 1.2
PCDHGC3-204ENST00000617222 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
PCDHGC3-204ENST00000617222 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
PCDHGC3-204ENST00000617222 NEURL4Q96JN8 1562 aa22.55■■□□□ 1.2
PCDHGC3-204ENST00000617222 TONSLQ96HA7 1378 aa22.53■■□□□ 1.2
PCDHGC3-204ENST00000617222 BCANQ96GW7 911 aa22.52■■□□□ 1.2
PCDHGC3-204ENST00000617222 SCAF11Q99590 1463 aaKnown RBP22.52■■□□□ 1.2
PCDHGC3-204ENST00000617222 ADGRF5Q8IZF2 1346 aa22.51■■□□□ 1.19
PCDHGC3-204ENST00000617222 NEXMIFQ5QGS0 1516 aa22.51■■□□□ 1.19
PCDHGC3-204ENST00000617222 STAC3Q96MF2 364 aa22.49■■□□□ 1.19
PCDHGC3-204ENST00000617222 TIMELESSQ9UNS1 1208 aa22.47■■□□□ 1.19
PCDHGC3-204ENST00000617222 PLEKHG1Q9ULL1 1385 aa22.46■■□□□ 1.19
PCDHGC3-204ENST00000617222 NPHP4O75161 1426 aaPredicted RBP22.46■■□□□ 1.19
PCDHGC3-204ENST00000617222 MED14O60244 1454 aa22.43■■□□□ 1.18
PCDHGC3-204ENST00000617222 SLC26A8Q96RN1 970 aa22.43■■□□□ 1.18
PCDHGC3-204ENST00000617222 DMRT2Q9Y5R5 561 aa22.43■■□□□ 1.18
PCDHGC3-204ENST00000617222 PPLO60437 1756 aa22.43■■□□□ 1.18
PCDHGC3-204ENST00000617222 MYOM2P54296 1465 aa22.42■■□□□ 1.18
PCDHGC3-204ENST00000617222 STRCQ7RTU9 1775 aa22.4■■□□□ 1.18
PCDHGC3-204ENST00000617222 CFAP70Q5T0N1 1121 aa22.39■■□□□ 1.17
PCDHGC3-204ENST00000617222 TBX22Q9Y458 520 aa22.39■■□□□ 1.17
PCDHGC3-204ENST00000617222 IFT172Q9UG01 1749 aa22.39■■□□□ 1.17
PCDHGC3-204ENST00000617222 NBPF8Q3BBV2 869 aa22.38■■□□□ 1.17
PCDHGC3-204ENST00000617222 C14orf93Q9H972 538 aaKnown RBP22.38■■□□□ 1.17
PCDHGC3-204ENST00000617222 NRXN1Q9ULB1 1477 aa22.38■■□□□ 1.17
PCDHGC3-204ENST00000617222 PIK3C2GO75747 1445 aa22.37■■□□□ 1.17
PCDHGC3-204ENST00000617222 ADAMTS13Q76LX8 1427 aa22.37■■□□□ 1.17
PCDHGC3-204ENST00000617222 POLR1AO95602 1720 aaPredicted RBP22.37■■□□□ 1.17
PCDHGC3-204ENST00000617222 PRAG1Q86YV5 1406 aa22.36■■□□□ 1.17
PCDHGC3-204ENST00000617222 SETBP1Q9Y6X0 1596 aa22.33■■□□□ 1.17
PCDHGC3-204ENST00000617222 IQGAP1P46940 1657 aa22.33■■□□□ 1.17
PCDHGC3-204ENST00000617222 TMEM132EQ6IEE7 984 aa22.32■■□□□ 1.16
PCDHGC3-204ENST00000617222 METP08581 1390 aa22.31■■□□□ 1.16
PCDHGC3-204ENST00000617222 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
PCDHGC3-204ENST00000617222 NBPF1Q3BBV0 1214 aa22.3■■□□□ 1.16
PCDHGC3-204ENST00000617222 NRXN3Q9Y4C0 1643 aa22.3■■□□□ 1.16
PCDHGC3-204ENST00000617222 STK26Q9P289 416 aa22.26■■□□□ 1.15
PCDHGC3-204ENST00000617222 PIK3R4Q99570 1358 aa22.25■■□□□ 1.15
PCDHGC3-204ENST00000617222 DIP2AQ14689 1571 aa22.25■■□□□ 1.15
PCDHGC3-204ENST00000617222 KCNA6P17658 529 aa22.25■■□□□ 1.15
PCDHGC3-204ENST00000617222 AMOTL2Q9Y2J4 779 aa22.25■■□□□ 1.15
PCDHGC3-204ENST00000617222 ZNF335Q9H4Z2 1342 aaPredicted RBP22.25■■□□□ 1.15
PCDHGC3-204ENST00000617222 PTPRUQ92729 1446 aa22.23■■□□□ 1.15
PCDHGC3-204ENST00000617222 ZEB1P37275 1124 aaPredicted RBP22.23■■□□□ 1.15
PCDHGC3-204ENST00000617222 ROCK2O75116 1388 aaKnown RBP22.23■■□□□ 1.15
PCDHGC3-204ENST00000617222 CARD11Q9BXL7 1154 aa22.2■■□□□ 1.14
PCDHGC3-204ENST00000617222 LRPPRCP42704 1394 aaKnown RBP22.2■■□□□ 1.14
PCDHGC3-204ENST00000617222 ASXL1Q8IXJ9 1541 aa22.2■■□□□ 1.14
PCDHGC3-204ENST00000617222 TRAK1Q9UPV9 953 aa22.19■■□□□ 1.14
PCDHGC3-204ENST00000617222 YTHDC2Q9H6S0 1430 aaKnown RBP22.19■■□□□ 1.14
PCDHGC3-204ENST00000617222 SETD1AO15047 1707 aaKnown RBP22.19■■□□□ 1.14
PCDHGC3-204ENST00000617222 LAMC1P11047 1609 aa22.18■■□□□ 1.14
PCDHGC3-204ENST00000617222 ADGRB1O14514 1584 aa22.18■■□□□ 1.14
PCDHGC3-204ENST00000617222 RALGAPBQ86X10 1494 aa22.18■■□□□ 1.14
PCDHGC3-204ENST00000617222 TRPM1Q7Z4N2 1603 aa22.17■■□□□ 1.14
PCDHGC3-204ENST00000617222 ABCC11Q96J66 1382 aa22.17■■□□□ 1.14
PCDHGC3-204ENST00000617222 KIAA1210Q9ULL0 1709 aa22.17■■□□□ 1.14
PCDHGC3-204ENST00000617222 PROSER2Q86WR7 435 aaPredicted RBP22.16■■□□□ 1.14
PCDHGC3-204ENST00000617222 GPRASP1Q5JY77 1395 aa22.15■■□□□ 1.14
PCDHGC3-204ENST00000617222 ROBO2Q9HCK4 1378 aa22.13■■□□□ 1.13
PCDHGC3-204ENST00000617222 WAPLQ7Z5K2 1190 aa22.13■■□□□ 1.13
PCDHGC3-204ENST00000617222 RBM33Q96EV2 1170 aaKnown RBP22.13■■□□□ 1.13
PCDHGC3-204ENST00000617222 CHD2O14647 1828 aaKnown RBP22.13■■□□□ 1.13
PCDHGC3-204ENST00000617222 SIRT1Q96EB6 747 aa22.12■■□□□ 1.13
PCDHGC3-204ENST00000617222 PRAM1Q96QH2 718 aa22.11■■□□□ 1.13
PCDHGC3-204ENST00000617222 POGKQ9P215 609 aa22.11■■□□□ 1.13
PCDHGC3-204ENST00000617222 TECPR2O15040 1411 aa22.1■■□□□ 1.13
PCDHGC3-204ENST00000617222 NWD1Q149M9 1564 aa22.1■■□□□ 1.13
PCDHGC3-204ENST00000617222 SAFB2Q14151 953 aaKnown RBP eCLIP22.09■■□□□ 1.13
PCDHGC3-204ENST00000617222 STRCP1A6NGW2 1772 aa22.08■■□□□ 1.13
PCDHGC3-204ENST00000617222 PLEKHH1Q9ULM0 1364 aa22.08■■□□□ 1.12
PCDHGC3-204ENST00000617222 XRN1Q8IZH2 1706 aaKnown RBP22.08■■□□□ 1.12
PCDHGC3-204ENST00000617222 NKTRP30414 1462 aaKnown RBP22.08■■□□□ 1.12
PCDHGC3-204ENST00000617222 PTCH1Q13635 1447 aa22.07■■□□□ 1.12
PCDHGC3-204ENST00000617222 LTBP4Q8N2S1 1624 aa22.07■■□□□ 1.12
PCDHGC3-204ENST00000617222 TMEM94Q12767 1356 aa22.07■■□□□ 1.12
PCDHGC3-204ENST00000617222 CPS1P31327 1500 aa22.06■■□□□ 1.12
PCDHGC3-204ENST00000617222 FAM135BQ49AJ0 1406 aa22.06■■□□□ 1.12
PCDHGC3-204ENST00000617222 C14orf37Q86TY3 774 aa22.05■■□□□ 1.12
PCDHGC3-204ENST00000617222 LRRC7Q96NW7 1537 aa22.05■■□□□ 1.12
PCDHGC3-204ENST00000617222 DLC1Q96QB1 1528 aa22.05■■□□□ 1.12
PCDHGC3-204ENST00000617222 CENPJQ9HC77 1338 aaPredicted RBP22.04■■□□□ 1.12
PCDHGC3-204ENST00000617222 EIF3AQ14152 1382 aaKnown RBP22.03■■□□□ 1.12
PCDHGC3-204ENST00000617222 USP47Q96K76 1375 aa22.03■■□□□ 1.12
PCDHGC3-204ENST00000617222 ST20-MTHFSA0A0A6YYL1 179 aa22.02■■□□□ 1.12
PCDHGC3-204ENST00000617222 KNDC1Q76NI1 1749 aa22.01■■□□□ 1.11
PCDHGC3-204ENST00000617222 EIF4G2P78344 907 aaKnown RBP eCLIP22.01■■□□□ 1.11
PCDHGC3-204ENST00000617222 MINK1Q8N4C8 1332 aaPredicted RBP22.01■■□□□ 1.11
PCDHGC3-204ENST00000617222 HSPA5P11021 654 aaKnown RBP21.99■■□□□ 1.11
PCDHGC3-204ENST00000617222 CERKQ8TCT0 537 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms