RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 LRRC7Q96NW7 1537 aa24■■□□□ 1.43
SPTSSB-204ENST00000617024 CHGAP10645 457 aaKnown RBP24■■□□□ 1.43
SPTSSB-204ENST00000617024 PHF23Q9BUL5 403 aaPredicted RBP23.98■■□□□ 1.43
SPTSSB-204ENST00000617024 TRPM2O94759 1503 aa23.97■■□□□ 1.43
SPTSSB-204ENST00000617024 ANKRD30BQ9BXX2 1392 aa23.96■■□□□ 1.43
SPTSSB-204ENST00000617024 SENP3Q9H4L4 574 aaPredicted RBP23.96■■□□□ 1.43
SPTSSB-204ENST00000617024 DHX57Q6P158 1386 aaKnown RBP23.95■■□□□ 1.42
SPTSSB-204ENST00000617024 PIK3C2BO00750 1634 aa23.94■■□□□ 1.42
SPTSSB-204ENST00000617024 CCDC144AA2RUR9 1427 aa23.93■■□□□ 1.42
SPTSSB-204ENST00000617024 XIRP1Q702N8 1843 aaKnown RBP23.91■■□□□ 1.42
SPTSSB-204ENST00000617024 UBR1Q8IWV7 1749 aa23.91■■□□□ 1.42
SPTSSB-204ENST00000617024 CLTCL1P53675 1640 aa23.9■■□□□ 1.42
SPTSSB-204ENST00000617024 HDGFP51858 240 aaKnown RBP23.88■■□□□ 1.41
SPTSSB-204ENST00000617024 ZNF326Q5BKZ1 582 aaKnown RBP23.88■■□□□ 1.41
SPTSSB-204ENST00000617024 RGS17Q9UGC6 210 aaPredicted RBP23.88■■□□□ 1.41
SPTSSB-204ENST00000617024 ADGRB3O60242 1522 aa23.88■■□□□ 1.41
SPTSSB-204ENST00000617024 KDM5AP29375 1690 aaKnown RBP23.87■■□□□ 1.41
SPTSSB-204ENST00000617024 TMEM131LA2VDJ0 1609 aa23.87■■□□□ 1.41
SPTSSB-204ENST00000617024 EID1Q9Y6B2 187 aa23.86■■□□□ 1.41
SPTSSB-204ENST00000617024 KIF1BO60333 1816 aa23.86■■□□□ 1.41
SPTSSB-204ENST00000617024 TXNDC2Q86VQ3 553 aa23.85■■□□□ 1.41
SPTSSB-204ENST00000617024 TMEM2Q9UHN6 1383 aa23.85■■□□□ 1.41
SPTSSB-204ENST00000617024 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
SPTSSB-204ENST00000617024 SCAF11Q99590 1463 aaKnown RBP23.82■■□□□ 1.4
SPTSSB-204ENST00000617024 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.82■■□□□ 1.4
SPTSSB-204ENST00000617024 MYO5BQ9ULV0 1848 aa23.82■■□□□ 1.4
SPTSSB-204ENST00000617024 ARHGAP23Q9P227 1491 aa23.81■■□□□ 1.4
SPTSSB-204ENST00000617024 LTKP29376 864 aa23.81■■□□□ 1.4
SPTSSB-204ENST00000617024 SIN3AQ96ST3 1273 aa23.81■■□□□ 1.4
SPTSSB-204ENST00000617024 RPGRIP1LQ68CZ1 1315 aa23.81■■□□□ 1.4
SPTSSB-204ENST00000617024 SLIT1O75093 1534 aa23.8■■□□□ 1.4
SPTSSB-204ENST00000617024 RIMS2Q9UQ26 1411 aa23.79■■□□□ 1.4
SPTSSB-204ENST00000617024 NEUROD1Q13562 356 aa23.79■■□□□ 1.4
SPTSSB-204ENST00000617024 CCER1Q8TC90 406 aaPredicted RBP23.79■■□□□ 1.4
SPTSSB-204ENST00000617024 SPATA31E1Q6ZUB1 1445 aa23.77■■□□□ 1.4
SPTSSB-204ENST00000617024 PPP1R15AO75807 674 aaPredicted RBP23.77■■□□□ 1.4
SPTSSB-204ENST00000617024 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
SPTSSB-204ENST00000617024 VGFO15240 615 aaPredicted RBP23.75■■□□□ 1.39
SPTSSB-204ENST00000617024 ZFYVE9O95405 1425 aa23.75■■□□□ 1.39
SPTSSB-204ENST00000617024 BCANQ96GW7 911 aa23.73■■□□□ 1.39
SPTSSB-204ENST00000617024 CLSPNQ9HAW4 1339 aa23.73■■□□□ 1.39
SPTSSB-204ENST00000617024 FAM135BQ49AJ0 1406 aa23.7■■□□□ 1.38
SPTSSB-204ENST00000617024 POTEAQ6S8J7 498 aa23.69■■□□□ 1.38
SPTSSB-204ENST00000617024 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
SPTSSB-204ENST00000617024 NEXMIFQ5QGS0 1516 aa23.68■■□□□ 1.38
SPTSSB-204ENST00000617024 ROBO1Q9Y6N7 1651 aa23.67■■□□□ 1.38
SPTSSB-204ENST00000617024 STAC3Q96MF2 364 aa23.67■■□□□ 1.38
SPTSSB-204ENST00000617024 KDM2AQ9Y2K7 1162 aa23.67■■□□□ 1.38
SPTSSB-204ENST00000617024 PLEKHG1Q9ULL1 1385 aa23.66■■□□□ 1.38
SPTSSB-204ENST00000617024 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
SPTSSB-204ENST00000617024 ADGRF5Q8IZF2 1346 aa23.63■■□□□ 1.37
SPTSSB-204ENST00000617024 PPLO60437 1756 aa23.63■■□□□ 1.37
SPTSSB-204ENST00000617024 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
SPTSSB-204ENST00000617024 SETD1AO15047 1707 aaKnown RBP23.62■■□□□ 1.37
SPTSSB-204ENST00000617024 SLC26A8Q96RN1 970 aa23.62■■□□□ 1.37
SPTSSB-204ENST00000617024 RBM33Q96EV2 1170 aaKnown RBP23.6■■□□□ 1.37
SPTSSB-204ENST00000617024 TBX22Q9Y458 520 aa23.6■■□□□ 1.37
SPTSSB-204ENST00000617024 TONSLQ96HA7 1378 aa23.59■■□□□ 1.37
SPTSSB-204ENST00000617024 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
SPTSSB-204ENST00000617024 KCNA6P17658 529 aa23.57■■□□□ 1.36
SPTSSB-204ENST00000617024 NWD1Q149M9 1564 aa23.57■■□□□ 1.36
SPTSSB-204ENST00000617024 MYOM2P54296 1465 aa23.55■■□□□ 1.36
SPTSSB-204ENST00000617024 ADAMTS13Q76LX8 1427 aa23.54■■□□□ 1.36
SPTSSB-204ENST00000617024 TIMELESSQ9UNS1 1208 aa23.54■■□□□ 1.36
SPTSSB-204ENST00000617024 SETBP1Q9Y6X0 1596 aa23.53■■□□□ 1.36
SPTSSB-204ENST00000617024 PHLPP1O60346 1717 aa23.53■■□□□ 1.36
SPTSSB-204ENST00000617024 PROSER2Q86WR7 435 aaPredicted RBP23.52■■□□□ 1.36
SPTSSB-204ENST00000617024 C14orf93Q9H972 538 aaKnown RBP23.52■■□□□ 1.36
SPTSSB-204ENST00000617024 NKTRP30414 1462 aaKnown RBP23.51■■□□□ 1.35
SPTSSB-204ENST00000617024 NRXN1Q9ULB1 1477 aa23.51■■□□□ 1.35
SPTSSB-204ENST00000617024 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
SPTSSB-204ENST00000617024 CFAP70Q5T0N1 1121 aa23.5■■□□□ 1.35
SPTSSB-204ENST00000617024 DIP2AQ14689 1571 aa23.49■■□□□ 1.35
SPTSSB-204ENST00000617024 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
SPTSSB-204ENST00000617024 PIK3R4Q99570 1358 aa23.47■■□□□ 1.35
SPTSSB-204ENST00000617024 CHD2O14647 1828 aaKnown RBP23.47■■□□□ 1.35
SPTSSB-204ENST00000617024 METP08581 1390 aa23.46■■□□□ 1.35
SPTSSB-204ENST00000617024 COL16A1Q07092 1604 aaPredicted RBP23.46■■□□□ 1.35
SPTSSB-204ENST00000617024 PRAG1Q86YV5 1406 aa23.44■■□□□ 1.34
SPTSSB-204ENST00000617024 TMEM132EQ6IEE7 984 aa23.44■■□□□ 1.34
SPTSSB-204ENST00000617024 AMOTL2Q9Y2J4 779 aa23.44■■□□□ 1.34
SPTSSB-204ENST00000617024 MSH6P52701 1360 aa23.43■■□□□ 1.34
SPTSSB-204ENST00000617024 JCADQ9P266 1359 aa23.43■■□□□ 1.34
SPTSSB-204ENST00000617024 SLAIN2Q9P270 581 aa23.43■■□□□ 1.34
SPTSSB-204ENST00000617024 LRP6O75581 1613 aa23.42■■□□□ 1.34
SPTSSB-204ENST00000617024 NBPF8Q3BBV2 869 aa23.41■■□□□ 1.34
SPTSSB-204ENST00000617024 STK26Q9P289 416 aa23.39■■□□□ 1.33
SPTSSB-204ENST00000617024 PTPRUQ92729 1446 aa23.39■■□□□ 1.33
SPTSSB-204ENST00000617024 LAMC1P11047 1609 aa23.37■■□□□ 1.33
SPTSSB-204ENST00000617024 NBPF1Q3BBV0 1214 aa23.37■■□□□ 1.33
SPTSSB-204ENST00000617024 LRPPRCP42704 1394 aaKnown RBP23.34■■□□□ 1.33
SPTSSB-204ENST00000617024 YTHDC2Q9H6S0 1430 aaKnown RBP23.33■■□□□ 1.33
SPTSSB-204ENST00000617024 KIAA1210Q9ULL0 1709 aa23.33■■□□□ 1.33
SPTSSB-204ENST00000617024 ABCC11Q96J66 1382 aa23.33■■□□□ 1.33
SPTSSB-204ENST00000617024 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.33■■□□□ 1.32
SPTSSB-204ENST00000617024 SHPRHQ149N8 1683 aa23.32■■□□□ 1.32
SPTSSB-204ENST00000617024 UPF1Q92900 1129 aaKnown RBP eCLIP23.32■■□□□ 1.32
SPTSSB-204ENST00000617024 AHDC1Q5TGY3 1603 aaPredicted RBP23.31■■□□□ 1.32
SPTSSB-204ENST00000617024 TRAK1Q9UPV9 953 aa23.31■■□□□ 1.32
SPTSSB-204ENST00000617024 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms