RNA–Protein interactions for RNA: ENST00000616051.1

RCC1L-204, Transcript of RCC1 like, humanhuman

TSL 2

Gene RCC1L, Length 1,610 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-204ENST00000616051 NEXMIFQ5QGS0 1516 aa40.05■■■■■ 4
RCC1L-204ENST00000616051 PPLO60437 1756 aa40.03■■■■■ 4
RCC1L-204ENST00000616051 LTKP29376 864 aa40.03■■■■■ 4
RCC1L-204ENST00000616051 TXNDC2Q86VQ3 553 aa40.02■■■■■ 4
RCC1L-204ENST00000616051 HDGFP51858 240 aaKnown RBP40.02■■■■■ 4
RCC1L-204ENST00000616051 NUTM2DQ5VT03 806 aaPredicted RBP40.02■■■■■ 4
RCC1L-204ENST00000616051 ANKLE2Q86XL3 938 aa40.02■■■■■ 4
RCC1L-204ENST00000616051 IFT172Q9UG01 1749 aa40.02■■■■■ 4
RCC1L-204ENST00000616051 EID1Q9Y6B2 187 aa40.01■■■■■ 4
RCC1L-204ENST00000616051 ABCF1Q8NE71 845 aaKnown RBP eCLIP40■■■■□ 3.99
RCC1L-204ENST00000616051 L3MBTL2Q969R5 705 aa39.99■■■■□ 3.99
RCC1L-204ENST00000616051 DCAF11Q8TEB1 546 aa39.98■■■■□ 3.99
RCC1L-204ENST00000616051 TONSLQ96HA7 1378 aa39.96■■■■□ 3.99
RCC1L-204ENST00000616051 SCAF11Q99590 1463 aaKnown RBP39.96■■■■□ 3.99
RCC1L-204ENST00000616051 NCKAP5LQ9HCH0 1330 aa39.96■■■■□ 3.99
RCC1L-204ENST00000616051 POLR1AO95602 1720 aaPredicted RBP39.94■■■■□ 3.98
RCC1L-204ENST00000616051 VGFO15240 615 aaPredicted RBP39.94■■■■□ 3.98
RCC1L-204ENST00000616051 STRCQ7RTU9 1775 aa39.93■■■■□ 3.98
RCC1L-204ENST00000616051 PPP1R15AO75807 674 aaPredicted RBP39.93■■■■□ 3.98
RCC1L-204ENST00000616051 KDM2AQ9Y2K7 1162 aa39.92■■■■□ 3.98
RCC1L-204ENST00000616051 STAC3Q96MF2 364 aa39.89■■■■□ 3.98
RCC1L-204ENST00000616051 ADGRF5Q8IZF2 1346 aa39.89■■■■□ 3.98
RCC1L-204ENST00000616051 TIMELESSQ9UNS1 1208 aa39.88■■■■□ 3.97
RCC1L-204ENST00000616051 MYOM2P54296 1465 aa39.87■■■■□ 3.97
RCC1L-204ENST00000616051 MED14O60244 1454 aa39.85■■■■□ 3.97
RCC1L-204ENST00000616051 PLEKHG1Q9ULL1 1385 aa39.85■■■■□ 3.97
RCC1L-204ENST00000616051 SENP3Q9H4L4 574 aaPredicted RBP39.83■■■■□ 3.97
RCC1L-204ENST00000616051 NPHP4O75161 1426 aaPredicted RBP39.81■■■■□ 3.96
RCC1L-204ENST00000616051 NRXN1Q9ULB1 1477 aa39.81■■■■□ 3.96
RCC1L-204ENST00000616051 BCANQ96GW7 911 aa39.77■■■■□ 3.96
RCC1L-204ENST00000616051 IQGAP1P46940 1657 aa39.77■■■■□ 3.96
RCC1L-204ENST00000616051 PIK3C2GO75747 1445 aa39.75■■■■□ 3.95
RCC1L-204ENST00000616051 NRXN3Q9Y4C0 1643 aa39.74■■■■□ 3.95
RCC1L-204ENST00000616051 SETBP1Q9Y6X0 1596 aa39.74■■■■□ 3.95
RCC1L-204ENST00000616051 PRAG1Q86YV5 1406 aa39.71■■■■□ 3.95
RCC1L-204ENST00000616051 ADAMTS13Q76LX8 1427 aa39.71■■■■□ 3.95
RCC1L-204ENST00000616051 SLC26A8Q96RN1 970 aa39.69■■■■□ 3.94
RCC1L-204ENST00000616051 DMRT2Q9Y5R5 561 aa39.69■■■■□ 3.94
RCC1L-204ENST00000616051 ALKQ9UM73 1620 aa39.66■■■■□ 3.94
RCC1L-204ENST00000616051 NBPF8Q3BBV2 869 aa39.66■■■■□ 3.94
RCC1L-204ENST00000616051 C14orf93Q9H972 538 aaKnown RBP39.65■■■■□ 3.94
RCC1L-204ENST00000616051 CFAP70Q5T0N1 1121 aa39.65■■■■□ 3.94
RCC1L-204ENST00000616051 TBX22Q9Y458 520 aa39.65■■■■□ 3.94
RCC1L-204ENST00000616051 SETD1AO15047 1707 aaKnown RBP39.62■■■■□ 3.93
RCC1L-204ENST00000616051 DIP2AQ14689 1571 aa39.61■■■■□ 3.93
RCC1L-204ENST00000616051 LAMC1P11047 1609 aa39.58■■■■□ 3.93
RCC1L-204ENST00000616051 KIAA1210Q9ULL0 1709 aa39.57■■■■□ 3.92
RCC1L-204ENST00000616051 METP08581 1390 aa39.55■■■■□ 3.92
RCC1L-204ENST00000616051 TRPM1Q7Z4N2 1603 aa39.54■■■■□ 3.92
RCC1L-204ENST00000616051 NBPF1Q3BBV0 1214 aa39.51■■■■□ 3.91
RCC1L-204ENST00000616051 TMEM132EQ6IEE7 984 aa39.51■■■■□ 3.91
RCC1L-204ENST00000616051 ASXL1Q8IXJ9 1541 aa39.49■■■■□ 3.91
RCC1L-204ENST00000616051 PIK3R4Q99570 1358 aa39.48■■■■□ 3.91
RCC1L-204ENST00000616051 ADGRB1O14514 1584 aa39.46■■■■□ 3.91
RCC1L-204ENST00000616051 CHD2O14647 1828 aaKnown RBP39.46■■■■□ 3.91
RCC1L-204ENST00000616051 PTPRUQ92729 1446 aa39.45■■■■□ 3.91
RCC1L-204ENST00000616051 RALGAPBQ86X10 1494 aa39.44■■■■□ 3.9
RCC1L-204ENST00000616051 ZEB1P37275 1124 aaPredicted RBP39.42■■■■□ 3.9
RCC1L-204ENST00000616051 ROCK2O75116 1388 aaKnown RBP39.41■■■■□ 3.9
RCC1L-204ENST00000616051 KCNA6P17658 529 aa39.4■■■■□ 3.9
RCC1L-204ENST00000616051 AMOTL2Q9Y2J4 779 aa39.4■■■■□ 3.9
RCC1L-204ENST00000616051 YTHDC2Q9H6S0 1430 aaKnown RBP39.38■■■■□ 3.9
RCC1L-204ENST00000616051 ZNF335Q9H4Z2 1342 aaPredicted RBP39.38■■■■□ 3.89
RCC1L-204ENST00000616051 LRPPRCP42704 1394 aaKnown RBP39.37■■■■□ 3.89
RCC1L-204ENST00000616051 GPRASP1Q5JY77 1395 aa39.37■■■■□ 3.89
RCC1L-204ENST00000616051 STRCP1A6NGW2 1772 aa39.37■■■■□ 3.89
RCC1L-204ENST00000616051 STK26Q9P289 416 aa39.36■■■■□ 3.89
RCC1L-204ENST00000616051 NWD1Q149M9 1564 aa39.35■■■■□ 3.89
RCC1L-204ENST00000616051 XRN1Q8IZH2 1706 aaKnown RBP39.34■■■■□ 3.89
RCC1L-204ENST00000616051 ABCC11Q96J66 1382 aa39.32■■■■□ 3.89
RCC1L-204ENST00000616051 CARD11Q9BXL7 1154 aa39.31■■■■□ 3.88
RCC1L-204ENST00000616051 TRAK1Q9UPV9 953 aa39.29■■■■□ 3.88
RCC1L-204ENST00000616051 KNDC1Q76NI1 1749 aa39.28■■■■□ 3.88
RCC1L-204ENST00000616051 TECPR2O15040 1411 aa39.27■■■■□ 3.88
RCC1L-204ENST00000616051 ROBO2Q9HCK4 1378 aa39.23■■■■□ 3.87
RCC1L-204ENST00000616051 NKTRP30414 1462 aaKnown RBP39.23■■■■□ 3.87
RCC1L-204ENST00000616051 CPS1P31327 1500 aa39.22■■■■□ 3.87
RCC1L-204ENST00000616051 PTCH1Q13635 1447 aa39.22■■■■□ 3.87
RCC1L-204ENST00000616051 SIRT1Q96EB6 747 aa39.22■■■■□ 3.87
RCC1L-204ENST00000616051 DLC1Q96QB1 1528 aa39.22■■■■□ 3.87
RCC1L-204ENST00000616051 LTBP4Q8N2S1 1624 aa39.21■■■■□ 3.87
RCC1L-204ENST00000616051 ARHGEF28Q8N1W1 1705 aaKnown RBP39.19■■■■□ 3.86
RCC1L-204ENST00000616051 PROSER2Q86WR7 435 aaPredicted RBP39.18■■■■□ 3.86
RCC1L-204ENST00000616051 WAPLQ7Z5K2 1190 aa39.17■■■■□ 3.86
RCC1L-204ENST00000616051 FAM135BQ49AJ0 1406 aa39.16■■■■□ 3.86
RCC1L-204ENST00000616051 PRAM1Q96QH2 718 aa39.14■■■■□ 3.86
RCC1L-204ENST00000616051 RBM33Q96EV2 1170 aaKnown RBP39.14■■■■□ 3.86
RCC1L-204ENST00000616051 LRRC7Q96NW7 1537 aa39.13■■■■□ 3.85
RCC1L-204ENST00000616051 PLEKHH1Q9ULM0 1364 aa39.13■■■■□ 3.85
RCC1L-204ENST00000616051 POGKQ9P215 609 aa39.11■■■■□ 3.85
RCC1L-204ENST00000616051 USP47Q96K76 1375 aa39.09■■■■□ 3.85
RCC1L-204ENST00000616051 TMEM94Q12767 1356 aa39.08■■■■□ 3.85
RCC1L-204ENST00000616051 EIF3AQ14152 1382 aaKnown RBP39.08■■■■□ 3.85
RCC1L-204ENST00000616051 XIRP1Q702N8 1843 aaKnown RBP39.08■■■■□ 3.85
RCC1L-204ENST00000616051 SAFB2Q14151 953 aaKnown RBP eCLIP39.07■■■■□ 3.84
RCC1L-204ENST00000616051 CENPJQ9HC77 1338 aaPredicted RBP39.05■■■■□ 3.84
RCC1L-204ENST00000616051 NCOA3Q9Y6Q9 1424 aa39.03■■■■□ 3.84
RCC1L-204ENST00000616051 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.03■■■■□ 3.84
RCC1L-204ENST00000616051 ST20-MTHFSA0A0A6YYL1 179 aa39.01■■■■□ 3.84
RCC1L-204ENST00000616051 EIF4G2P78344 907 aaKnown RBP eCLIP39.01■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms