RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 CGNL1Q0VF96 1302 aa16.34■□□□□ 0.21
NLRC3-204ENST00000615877 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
NLRC3-204ENST00000615877 CCAR2Q8N163 923 aaKnown RBP16.34■□□□□ 0.21
NLRC3-204ENST00000615877 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
NLRC3-204ENST00000615877 BECN2A8MW95 431 aa16.34■□□□□ 0.21
NLRC3-204ENST00000615877 CHMP5Q9NZZ3 219 aa16.34■□□□□ 0.21
NLRC3-204ENST00000615877 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.33■□□□□ 0.21
NLRC3-204ENST00000615877 VPS37DQ86XT2 251 aa16.33■□□□□ 0.21
NLRC3-204ENST00000615877 ZNF592Q92610 1267 aa16.33■□□□□ 0.21
NLRC3-204ENST00000615877 MCTP1Q6DN14 999 aa16.33■□□□□ 0.2
NLRC3-204ENST00000615877 GPS2Q13227 327 aa16.32■□□□□ 0.2
NLRC3-204ENST00000615877 FAM184AQ8NB25 1140 aa16.32■□□□□ 0.2
NLRC3-204ENST00000615877 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
NLRC3-204ENST00000615877 APPP05067 770 aa16.32■□□□□ 0.2
NLRC3-204ENST00000615877 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
NLRC3-204ENST00000615877 AMOTL1Q8IY63 956 aa16.31■□□□□ 0.2
NLRC3-204ENST00000615877 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
NLRC3-204ENST00000615877 FAM43AQ8N2R8 423 aa16.3■□□□□ 0.2
NLRC3-204ENST00000615877 FOSBP53539 338 aa16.3■□□□□ 0.2
NLRC3-204ENST00000615877 FYB1O15117 783 aa16.29■□□□□ 0.2
NLRC3-204ENST00000615877 SYNE3Q6ZMZ3 975 aa16.28■□□□□ 0.2
NLRC3-204ENST00000615877 TSR1Q2NL82 804 aaKnown RBP16.28■□□□□ 0.2
NLRC3-204ENST00000615877 NFKBIBQ15653 356 aa16.27■□□□□ 0.2
NLRC3-204ENST00000615877 COG3Q96JB2 828 aa16.27■□□□□ 0.2
NLRC3-204ENST00000615877 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.19
NLRC3-204ENST00000615877 PPP1R1BQ9UD71 204 aaPredicted RBP16.27■□□□□ 0.19
NLRC3-204ENST00000615877 MTMR7Q9Y216 660 aa16.27■□□□□ 0.19
NLRC3-204ENST00000615877 KDM4AO75164 1064 aa16.26■□□□□ 0.19
NLRC3-204ENST00000615877 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
NLRC3-204ENST00000615877 TEFQ10587 303 aa16.26■□□□□ 0.19
NLRC3-204ENST00000615877 TEX35Q5T0J7 233 aa16.26■□□□□ 0.19
NLRC3-204ENST00000615877 REC8O95072 547 aa16.26■□□□□ 0.19
NLRC3-204ENST00000615877 PSME1Q06323 249 aa16.26■□□□□ 0.19
NLRC3-204ENST00000615877 USP47Q96K76 1375 aa16.26■□□□□ 0.19
NLRC3-204ENST00000615877 FHOD3Q2V2M9 1422 aa16.26■□□□□ 0.19
NLRC3-204ENST00000615877 TPM2P07951 284 aa16.26■□□□□ 0.19
NLRC3-204ENST00000615877 TPM1P09493 284 aa16.26■□□□□ 0.19
NLRC3-204ENST00000615877 MINK1Q8N4C8 1332 aaPredicted RBP16.26■□□□□ 0.19
NLRC3-204ENST00000615877 CHMP4CQ96CF2 233 aa16.25■□□□□ 0.19
NLRC3-204ENST00000615877 DDX19BQ9UMR2 479 aa16.25■□□□□ 0.19
NLRC3-204ENST00000615877 CCDC70Q6NSX1 233 aa16.25■□□□□ 0.19
NLRC3-204ENST00000615877 C9orf78Q9NZ63 289 aaPredicted RBP16.25■□□□□ 0.19
NLRC3-204ENST00000615877 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
NLRC3-204ENST00000615877 CCDC18Q5T9S5 1454 aa16.24■□□□□ 0.19
NLRC3-204ENST00000615877 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
NLRC3-204ENST00000615877 APAF1O14727 1248 aa16.23■□□□□ 0.19
NLRC3-204ENST00000615877 NUTM2GQ5VZR2 741 aa16.22■□□□□ 0.19
NLRC3-204ENST00000615877 CCDC144AA2RUR9 1427 aa16.22■□□□□ 0.19
NLRC3-204ENST00000615877 RBM33Q96EV2 1170 aaKnown RBP16.22■□□□□ 0.19
NLRC3-204ENST00000615877 CCDC43Q96MW1 224 aaKnown RBP16.22■□□□□ 0.19
NLRC3-204ENST00000615877 NFXL1Q6ZNB6 911 aa16.21■□□□□ 0.19
NLRC3-204ENST00000615877 NUCB2P80303 420 aa16.21■□□□□ 0.19
NLRC3-204ENST00000615877 ANO2Q9NQ90 1003 aa16.21■□□□□ 0.19
NLRC3-204ENST00000615877 NEXNQ0ZGT2 675 aa16.21■□□□□ 0.19
NLRC3-204ENST00000615877 FAM177BA6PVY3 158 aa16.21■□□□□ 0.19
NLRC3-204ENST00000615877 TRIM29Q14134 588 aa16.21■□□□□ 0.19
NLRC3-204ENST00000615877 DZIP1LQ8IYY4 767 aaKnown RBP16.21■□□□□ 0.19
NLRC3-204ENST00000615877 MRE11P49959 708 aa16.21■□□□□ 0.18
NLRC3-204ENST00000615877 HOMER1Q86YM7 354 aa16.21■□□□□ 0.18
NLRC3-204ENST00000615877 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
NLRC3-204ENST00000615877 RAPGEF2Q9Y4G8 1499 aa16.2■□□□□ 0.18
NLRC3-204ENST00000615877 RUFY2Q8WXA3 655 aa16.2■□□□□ 0.18
NLRC3-204ENST00000615877 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
NLRC3-204ENST00000615877 C22orf23Q9BZE7 217 aa16.2■□□□□ 0.18
NLRC3-204ENST00000615877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.19■□□□□ 0.18
NLRC3-204ENST00000615877 R3HCC1Q9Y3T6 440 aaKnown RBP16.19■□□□□ 0.18
NLRC3-204ENST00000615877 BICD2Q8TD16 824 aa16.19■□□□□ 0.18
NLRC3-204ENST00000615877 ZKSCAN1P17029 563 aaPredicted RBP16.18■□□□□ 0.18
NLRC3-204ENST00000615877 CCDC39Q9UFE4 941 aa16.18■□□□□ 0.18
NLRC3-204ENST00000615877 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
NLRC3-204ENST00000615877 INTS3Q68E01 1043 aaKnown RBP16.17■□□□□ 0.18
NLRC3-204ENST00000615877 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
NLRC3-204ENST00000615877 IFIT2P09913 472 aaKnown RBP16.17■□□□□ 0.18
NLRC3-204ENST00000615877 BCL11BQ9C0K0 894 aaPredicted RBP16.17■□□□□ 0.18
NLRC3-204ENST00000615877 IFT57Q9NWB7 429 aa16.17■□□□□ 0.18
NLRC3-204ENST00000615877 RSPH4AQ5TD94 716 aa16.16■□□□□ 0.18
NLRC3-204ENST00000615877 SASS6Q6UVJ0 657 aa16.16■□□□□ 0.18
NLRC3-204ENST00000615877 ARGLU1Q9NWB6 273 aaPredicted RBP16.15■□□□□ 0.18
NLRC3-204ENST00000615877 SMC3Q9UQE7 1217 aa16.14■□□□□ 0.18
NLRC3-204ENST00000615877 MTERF4Q7Z6M4 381 aaKnown RBP16.14■□□□□ 0.17
NLRC3-204ENST00000615877 VPS37CA5D8V6 355 aaPredicted RBP16.14■□□□□ 0.17
NLRC3-204ENST00000615877 UACAQ9BZF9 1416 aa16.14■□□□□ 0.17
NLRC3-204ENST00000615877 ROCK1Q13464 1354 aa16.14■□□□□ 0.17
NLRC3-204ENST00000615877 IKQ13123 557 aaPredicted RBP16.14■□□□□ 0.17
NLRC3-204ENST00000615877 MAP7D2Q96T17 732 aa16.14■□□□□ 0.17
NLRC3-204ENST00000615877 CNTLNQ9NXG0 1405 aa16.14■□□□□ 0.17
NLRC3-204ENST00000615877 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
NLRC3-204ENST00000615877 ERICH2A1L162 156 aa16.14■□□□□ 0.17
NLRC3-204ENST00000615877 CPLX1O14810 134 aa16.14■□□□□ 0.17
NLRC3-204ENST00000615877 IPO7O95373 1038 aaKnown RBP16.13■□□□□ 0.17
NLRC3-204ENST00000615877 ZNF428Q96B54 188 aa16.13■□□□□ 0.17
NLRC3-204ENST00000615877 BRPF3Q9ULD4 1205 aa16.13■□□□□ 0.17
NLRC3-204ENST00000615877 ATF3P18847 181 aa16.13■□□□□ 0.17
NLRC3-204ENST00000615877 TOP2AP11388 1531 aaKnown RBP16.13■□□□□ 0.17
NLRC3-204ENST00000615877 CCDC7Q96M83 1385 aa16.13■□□□□ 0.17
NLRC3-204ENST00000615877 MNS1Q8NEH6 495 aa16.13■□□□□ 0.17
NLRC3-204ENST00000615877 CPLX2Q6PUV4 134 aaKnown RBP16.12■□□□□ 0.17
NLRC3-204ENST00000615877 ANKRD20A12PQ8NF67 263 aa16.12■□□□□ 0.17
NLRC3-204ENST00000615877 NAP1L1P55209 391 aaKnown RBP16.12■□□□□ 0.17
NLRC3-204ENST00000615877 TRAK2O60296 914 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms