RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 HMMRO75330 724 aa11.94□□□□□ -0.5
CLTCL1-208ENST00000615606 FGD1P98174 961 aa11.94□□□□□ -0.5
CLTCL1-208ENST00000615606 UGGT2Q9NYU1 1516 aa11.94□□□□□ -0.5
CLTCL1-208ENST00000615606 ATP10BO94823 1461 aa11.94□□□□□ -0.5
CLTCL1-208ENST00000615606 TTC5Q8N0Z6 440 aa11.94□□□□□ -0.5
CLTCL1-208ENST00000615606 GOLGA6L22H0YM25 854 aa11.94□□□□□ -0.5
CLTCL1-208ENST00000615606 GGNBP2Q9H3C7 697 aa11.94□□□□□ -0.5
CLTCL1-208ENST00000615606 NBPF1Q3BBV0 1214 aa11.93□□□□□ -0.5
CLTCL1-208ENST00000615606 TAF7LQ5H9L4 462 aa11.93□□□□□ -0.5
CLTCL1-208ENST00000615606 RAPGEF4Q8WZA2 1011 aa11.93□□□□□ -0.5
CLTCL1-208ENST00000615606 SLC26A8Q96RN1 970 aa11.93□□□□□ -0.5
CLTCL1-208ENST00000615606 E9PSI1 815 aa11.93□□□□□ -0.5
CLTCL1-208ENST00000615606 SLC4A10Q6U841 1118 aa11.92□□□□□ -0.5
CLTCL1-208ENST00000615606 MCCP23508 829 aa11.92□□□□□ -0.5
CLTCL1-208ENST00000615606 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
CLTCL1-208ENST00000615606 PLCH2O75038 1416 aa11.92□□□□□ -0.5
CLTCL1-208ENST00000615606 PMFBP1Q8TBY8 1022 aa11.92□□□□□ -0.5
CLTCL1-208ENST00000615606 ABTB2Q8N961 1025 aa11.91□□□□□ -0.5
CLTCL1-208ENST00000615606 CHMP3Q9Y3E7 222 aa11.91□□□□□ -0.5
CLTCL1-208ENST00000615606 NCOA1Q15788 1441 aa11.91□□□□□ -0.5
CLTCL1-208ENST00000615606 WDR7Q9Y4E6 1490 aa11.91□□□□□ -0.5
CLTCL1-208ENST00000615606 DHX29Q7Z478 1369 aaKnown RBP11.91□□□□□ -0.5
CLTCL1-208ENST00000615606 APBB1O00213 710 aa11.91□□□□□ -0.5
CLTCL1-208ENST00000615606 GTF2E1P29083 439 aaPredicted RBP11.91□□□□□ -0.5
CLTCL1-208ENST00000615606 CNTLNQ9NXG0 1405 aa11.91□□□□□ -0.5
CLTCL1-208ENST00000615606 CDK19Q9BWU1 502 aa11.91□□□□□ -0.5
CLTCL1-208ENST00000615606 GPATCH8Q9UKJ3 1502 aaKnown RBP11.9□□□□□ -0.5
CLTCL1-208ENST00000615606 KIAA0556O60303 1618 aa11.9□□□□□ -0.5
CLTCL1-208ENST00000615606 CTTNBP2Q8WZ74 1663 aa11.9□□□□□ -0.5
CLTCL1-208ENST00000615606 RTEL1-TNFRSF6BF6WH68 1400 aa11.9□□□□□ -0.5
CLTCL1-208ENST00000615606 NLRP2Q9NX02 1062 aa11.9□□□□□ -0.5
CLTCL1-208ENST00000615606 APAF1O14727 1248 aa11.9□□□□□ -0.5
CLTCL1-208ENST00000615606 NUTM2GQ5VZR2 741 aa11.9□□□□□ -0.5
CLTCL1-208ENST00000615606 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
CLTCL1-208ENST00000615606 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
CLTCL1-208ENST00000615606 GORABQ5T7V8 394 aa11.89□□□□□ -0.51
CLTCL1-208ENST00000615606 NUP160Q12769 1436 aa11.89□□□□□ -0.51
CLTCL1-208ENST00000615606 RIPK4P57078 832 aa11.89□□□□□ -0.51
CLTCL1-208ENST00000615606 GPATCH3Q96I76 525 aa11.89□□□□□ -0.51
CLTCL1-208ENST00000615606 NBPF8Q3BBV2 869 aa11.88□□□□□ -0.51
CLTCL1-208ENST00000615606 CLUAP1Q96AJ1 413 aa11.88□□□□□ -0.51
CLTCL1-208ENST00000615606 ATAD2Q6PL18 1390 aa11.88□□□□□ -0.51
CLTCL1-208ENST00000615606 WASHC2AQ641Q2 1341 aa11.88□□□□□ -0.51
CLTCL1-208ENST00000615606 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
CLTCL1-208ENST00000615606 KIAA1211Q6ZU35 1233 aa11.87□□□□□ -0.51
CLTCL1-208ENST00000615606 WDR97A6NE52 1622 aa11.87□□□□□ -0.51
CLTCL1-208ENST00000615606 ANP32EQ9BTT0 268 aa11.87□□□□□ -0.51
CLTCL1-208ENST00000615606 ELL2O00472 640 aaPredicted RBP11.87□□□□□ -0.51
CLTCL1-208ENST00000615606 NEXNQ0ZGT2 675 aa11.86□□□□□ -0.51
CLTCL1-208ENST00000615606 SYTL4Q96C24 671 aaPredicted RBP11.86□□□□□ -0.51
CLTCL1-208ENST00000615606 CABP1Q9NZU7 370 aa11.86□□□□□ -0.51
CLTCL1-208ENST00000615606 NAP1L2Q9ULW6 460 aaPredicted RBP11.86□□□□□ -0.51
CLTCL1-208ENST00000615606 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
CLTCL1-208ENST00000615606 HSP90AB1P08238 724 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-208ENST00000615606 MTHFSP49914 203 aa11.85□□□□□ -0.51
CLTCL1-208ENST00000615606 GNAI1P63096 354 aa11.85□□□□□ -0.51
CLTCL1-208ENST00000615606 ZKSCAN2Q63HK3 967 aa11.85□□□□□ -0.51
CLTCL1-208ENST00000615606 SMG6Q86US8 1419 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-208ENST00000615606 SLC12A5Q9H2X9 1139 aa11.85□□□□□ -0.51
CLTCL1-208ENST00000615606 ZNF518AQ6AHZ1 1483 aa11.85□□□□□ -0.51
CLTCL1-208ENST00000615606 HMOX1P09601 288 aa11.84□□□□□ -0.51
CLTCL1-208ENST00000615606 ZRSR1Q15695 479 aaKnown RBP11.84□□□□□ -0.51
CLTCL1-208ENST00000615606 FBXO31Q5XUX0 539 aaPredicted RBP11.84□□□□□ -0.51
CLTCL1-208ENST00000615606 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
CLTCL1-208ENST00000615606 IDI1Q13907 227 aa11.84□□□□□ -0.51
CLTCL1-208ENST00000615606 BRD4O60885 1362 aaPredicted RBP11.84□□□□□ -0.51
CLTCL1-208ENST00000615606 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
CLTCL1-208ENST00000615606 ABCC2Q92887 1545 aa11.83□□□□□ -0.52
CLTCL1-208ENST00000615606 G3V3G9 751 aa11.83□□□□□ -0.52
CLTCL1-208ENST00000615606 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
CLTCL1-208ENST00000615606 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
CLTCL1-208ENST00000615606 CEBPAP49715 358 aaPredicted RBP11.83□□□□□ -0.52
CLTCL1-208ENST00000615606 KDM5BQ9UGL1 1544 aa11.83□□□□□ -0.52
CLTCL1-208ENST00000615606 GAS2L2Q8NHY3 880 aa11.83□□□□□ -0.52
CLTCL1-208ENST00000615606 FAM135AQ9P2D6 1515 aa11.83□□□□□ -0.52
CLTCL1-208ENST00000615606 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
CLTCL1-208ENST00000615606 HSCBQ8IWL3 235 aa11.82□□□□□ -0.52
CLTCL1-208ENST00000615606 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
CLTCL1-208ENST00000615606 PLEKHO1Q53GL0 409 aaPredicted RBP11.82□□□□□ -0.52
CLTCL1-208ENST00000615606 API5Q9BZZ5 524 aaKnown RBP11.82□□□□□ -0.52
CLTCL1-208ENST00000615606 CCDC61Q9Y6R9 512 aa11.82□□□□□ -0.52
CLTCL1-208ENST00000615606 MSH5O43196 834 aa11.81□□□□□ -0.52
CLTCL1-208ENST00000615606 A2MP01023 1474 aa11.81□□□□□ -0.52
CLTCL1-208ENST00000615606 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
CLTCL1-208ENST00000615606 TNRQ92752 1358 aa11.81□□□□□ -0.52
CLTCL1-208ENST00000615606 PPP2R1AP30153 589 aa11.81□□□□□ -0.52
CLTCL1-208ENST00000615606 DUOX2Q9NRD8 1548 aa11.81□□□□□ -0.52
CLTCL1-208ENST00000615606 BCL2L13Q9BXK5 485 aa11.8□□□□□ -0.52
CLTCL1-208ENST00000615606 ABCA5Q8WWZ7 1642 aa11.8□□□□□ -0.52
CLTCL1-208ENST00000615606 NUDT16Q96DE0 195 aaKnown RBP11.8□□□□□ -0.52
CLTCL1-208ENST00000615606 ABCC10Q5T3U5 1492 aa11.8□□□□□ -0.52
CLTCL1-208ENST00000615606 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-208ENST00000615606 SYCP2Q9BX26 1530 aa11.79□□□□□ -0.52
CLTCL1-208ENST00000615606 CDK11BP21127 795 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-208ENST00000615606 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
CLTCL1-208ENST00000615606 C9orf78Q9NZ63 289 aaPredicted RBP11.79□□□□□ -0.52
CLTCL1-208ENST00000615606 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
CLTCL1-208ENST00000615606 FRAT2O75474 233 aaPredicted RBP11.78□□□□□ -0.52
CLTCL1-208ENST00000615606 STRN4Q9NRL3 753 aa11.78□□□□□ -0.52
CLTCL1-208ENST00000615606 TRIM6-TRIM34B2RNG4 842 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms