RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 LTKP29376 864 aa11.76□□□□□ -0.53
PCDH9-205ENST00000614931 TXNDC2Q86VQ3 553 aa11.76□□□□□ -0.53
PCDH9-205ENST00000614931 SLC52A1Q9NWF4 448 aa11.76□□□□□ -0.53
PCDH9-205ENST00000614931 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
PCDH9-205ENST00000614931 TMEM2Q9UHN6 1383 aa11.76□□□□□ -0.53
PCDH9-205ENST00000614931 KIF1BO60333 1816 aa11.74□□□□□ -0.53
PCDH9-205ENST00000614931 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
PCDH9-205ENST00000614931 EID1Q9Y6B2 187 aa11.74□□□□□ -0.53
PCDH9-205ENST00000614931 ADGRB3O60242 1522 aa11.74□□□□□ -0.53
PCDH9-205ENST00000614931 STRCP1A6NGW2 1772 aa11.73□□□□□ -0.53
PCDH9-205ENST00000614931 UBAP1LF5GYI3 381 aa11.72□□□□□ -0.53
PCDH9-205ENST00000614931 NEUROD1Q13562 356 aa11.71□□□□□ -0.53
PCDH9-205ENST00000614931 TMEM131LA2VDJ0 1609 aa11.71□□□□□ -0.54
PCDH9-205ENST00000614931 CCDC144AA2RUR9 1427 aa11.7□□□□□ -0.54
PCDH9-205ENST00000614931 IFT172Q9UG01 1749 aa11.7□□□□□ -0.54
PCDH9-205ENST00000614931 LRRC7Q96NW7 1537 aa11.7□□□□□ -0.54
PCDH9-205ENST00000614931 TOM1O60784 492 aa11.68□□□□□ -0.54
PCDH9-205ENST00000614931 ZFYVE9O95405 1425 aa11.68□□□□□ -0.54
PCDH9-205ENST00000614931 SPATA31E1Q6ZUB1 1445 aa11.68□□□□□ -0.54
PCDH9-205ENST00000614931 ALKQ9UM73 1620 aa11.67□□□□□ -0.54
PCDH9-205ENST00000614931 PPLO60437 1756 aa11.67□□□□□ -0.54
PCDH9-205ENST00000614931 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
PCDH9-205ENST00000614931 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
PCDH9-205ENST00000614931 SLC26A8Q96RN1 970 aa11.65□□□□□ -0.54
PCDH9-205ENST00000614931 TONSLQ96HA7 1378 aa11.65□□□□□ -0.55
PCDH9-205ENST00000614931 PLEKHG1Q9ULL1 1385 aa11.65□□□□□ -0.55
PCDH9-205ENST00000614931 KCNA6P17658 529 aa11.64□□□□□ -0.55
PCDH9-205ENST00000614931 ZEB1P37275 1124 aaPredicted RBP11.64□□□□□ -0.55
PCDH9-205ENST00000614931 XIRP1Q702N8 1843 aaKnown RBP11.64□□□□□ -0.55
PCDH9-205ENST00000614931 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
PCDH9-205ENST00000614931 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.63□□□□□ -0.55
PCDH9-205ENST00000614931 L3MBTL2Q969R5 705 aa11.63□□□□□ -0.55
PCDH9-205ENST00000614931 NEXMIFQ5QGS0 1516 aa11.62□□□□□ -0.55
PCDH9-205ENST00000614931 PIP4K2BP78356 416 aa11.62□□□□□ -0.55
PCDH9-205ENST00000614931 NWD1Q149M9 1564 aa11.62□□□□□ -0.55
PCDH9-205ENST00000614931 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
PCDH9-205ENST00000614931 BCANQ96GW7 911 aa11.61□□□□□ -0.55
PCDH9-205ENST00000614931 TBX22Q9Y458 520 aa11.61□□□□□ -0.55
PCDH9-205ENST00000614931 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
PCDH9-205ENST00000614931 NKTRP30414 1462 aaKnown RBP11.6□□□□□ -0.55
PCDH9-205ENST00000614931 HSPA1LP34931 641 aa11.6□□□□□ -0.55
PCDH9-205ENST00000614931 TIMELESSQ9UNS1 1208 aa11.6□□□□□ -0.55
PCDH9-205ENST00000614931 CHD2O14647 1828 aaKnown RBP11.6□□□□□ -0.55
PCDH9-205ENST00000614931 TRPM1Q7Z4N2 1603 aa11.6□□□□□ -0.55
PCDH9-205ENST00000614931 ADAMTS13Q76LX8 1427 aa11.6□□□□□ -0.55
PCDH9-205ENST00000614931 TMEM94Q12767 1356 aa11.59□□□□□ -0.55
PCDH9-205ENST00000614931 RGL3Q3MIN7 710 aa11.59□□□□□ -0.55
PCDH9-205ENST00000614931 PROSER2Q86WR7 435 aaPredicted RBP11.59□□□□□ -0.55
PCDH9-205ENST00000614931 DIP2AQ14689 1571 aa11.58□□□□□ -0.55
PCDH9-205ENST00000614931 NBPF8Q3BBV2 869 aa11.58□□□□□ -0.56
PCDH9-205ENST00000614931 NUTM2DQ5VT03 806 aaPredicted RBP11.58□□□□□ -0.56
PCDH9-205ENST00000614931 SENP3Q9H4L4 574 aaPredicted RBP11.58□□□□□ -0.56
PCDH9-205ENST00000614931 MYOM2P54296 1465 aa11.57□□□□□ -0.56
PCDH9-205ENST00000614931 DISP3Q9P2K9 1392 aa11.57□□□□□ -0.56
PCDH9-205ENST00000614931 PIK3R4Q99570 1358 aa11.56□□□□□ -0.56
PCDH9-205ENST00000614931 PRAG1Q86YV5 1406 aa11.56□□□□□ -0.56
PCDH9-205ENST00000614931 NRXN1Q9ULB1 1477 aa11.56□□□□□ -0.56
PCDH9-205ENST00000614931 DCAF11Q8TEB1 546 aa11.55□□□□□ -0.56
PCDH9-205ENST00000614931 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
PCDH9-205ENST00000614931 KDM2AQ9Y2K7 1162 aa11.55□□□□□ -0.56
PCDH9-205ENST00000614931 NRXN3Q9Y4C0 1643 aa11.55□□□□□ -0.56
PCDH9-205ENST00000614931 SETD1AO15047 1707 aaKnown RBP11.55□□□□□ -0.56
PCDH9-205ENST00000614931 KIAA1210Q9ULL0 1709 aa11.55□□□□□ -0.56
PCDH9-205ENST00000614931 SETBP1Q9Y6X0 1596 aa11.54□□□□□ -0.56
PCDH9-205ENST00000614931 FAM135BQ49AJ0 1406 aa11.54□□□□□ -0.56
PCDH9-205ENST00000614931 NCOA3Q9Y6Q9 1424 aa11.54□□□□□ -0.56
PCDH9-205ENST00000614931 ZNF326Q5BKZ1 582 aaKnown RBP11.54□□□□□ -0.56
PCDH9-205ENST00000614931 RALGAPBQ86X10 1494 aa11.53□□□□□ -0.56
PCDH9-205ENST00000614931 ADGRF5Q8IZF2 1346 aa11.53□□□□□ -0.56
PCDH9-205ENST00000614931 MSH6P52701 1360 aa11.53□□□□□ -0.56
PCDH9-205ENST00000614931 PTPRUQ92729 1446 aa11.52□□□□□ -0.56
PCDH9-205ENST00000614931 LAMC1P11047 1609 aa11.51□□□□□ -0.57
PCDH9-205ENST00000614931 ILDR2Q71H61 639 aa11.51□□□□□ -0.57
PCDH9-205ENST00000614931 AMOTL2Q9Y2J4 779 aa11.51□□□□□ -0.57
PCDH9-205ENST00000614931 PIK3C2GO75747 1445 aa11.51□□□□□ -0.57
PCDH9-205ENST00000614931 ASXL1Q8IXJ9 1541 aa11.5□□□□□ -0.57
PCDH9-205ENST00000614931 MED1Q15648 1581 aaPredicted RBP11.5□□□□□ -0.57
PCDH9-205ENST00000614931 XRN1Q8IZH2 1706 aaKnown RBP11.5□□□□□ -0.57
PCDH9-205ENST00000614931 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
PCDH9-205ENST00000614931 RPGRIP1LQ68CZ1 1315 aa11.5□□□□□ -0.57
PCDH9-205ENST00000614931 ROBO1Q9Y6N7 1651 aa11.49□□□□□ -0.57
PCDH9-205ENST00000614931 METP08581 1390 aa11.49□□□□□ -0.57
PCDH9-205ENST00000614931 VGFO15240 615 aaPredicted RBP11.48□□□□□ -0.57
PCDH9-205ENST00000614931 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.48□□□□□ -0.57
PCDH9-205ENST00000614931 ADGRB1O14514 1584 aa11.47□□□□□ -0.57
PCDH9-205ENST00000614931 C19orf44Q9H6X5 657 aa11.47□□□□□ -0.57
PCDH9-205ENST00000614931 GPRASP1Q5JY77 1395 aa11.46□□□□□ -0.57
PCDH9-205ENST00000614931 NBPF1Q3BBV0 1214 aa11.46□□□□□ -0.57
PCDH9-205ENST00000614931 C14orf37Q86TY3 774 aa11.46□□□□□ -0.57
PCDH9-205ENST00000614931 CADPS2Q86UW7 1296 aa11.46□□□□□ -0.57
PCDH9-205ENST00000614931 CFAP70Q5T0N1 1121 aa11.45□□□□□ -0.58
PCDH9-205ENST00000614931 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
PCDH9-205ENST00000614931 ARHGEF28Q8N1W1 1705 aaKnown RBP11.45□□□□□ -0.58
PCDH9-205ENST00000614931 DCCP43146 1447 aa11.44□□□□□ -0.58
PCDH9-205ENST00000614931 ATF3P18847 181 aa11.44□□□□□ -0.58
PCDH9-205ENST00000614931 ROCK2O75116 1388 aaKnown RBP11.43□□□□□ -0.58
PCDH9-205ENST00000614931 PHLPP1O60346 1717 aa11.43□□□□□ -0.58
PCDH9-205ENST00000614931 SOCS7O14512 581 aa11.42□□□□□ -0.58
PCDH9-205ENST00000614931 C14orf93Q9H972 538 aaKnown RBP11.42□□□□□ -0.58
PCDH9-205ENST00000614931 KNDC1Q76NI1 1749 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms