RNA–Protein interactions for RNA: ENST00000614929.4

SNX21-213, Transcript of sorting nexin family member 21, humanhuman

TSL 5 BASIC

Gene SNX21, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-213ENST00000614929 NWD1Q149M9 1564 aa29.54■■■□□ 2.32
SNX21-213ENST00000614929 ILDR2Q71H61 639 aa29.52■■■□□ 2.32
SNX21-213ENST00000614929 KCNA6P17658 529 aa29.51■■■□□ 2.31
SNX21-213ENST00000614929 RIMS2Q9UQ26 1411 aa29.51■■■□□ 2.31
SNX21-213ENST00000614929 PLEKHG1Q9ULL1 1385 aa29.51■■■□□ 2.31
SNX21-213ENST00000614929 SLC26A8Q96RN1 970 aa29.5■■■□□ 2.31
SNX21-213ENST00000614929 CHD2O14647 1828 aaKnown RBP29.49■■■□□ 2.31
SNX21-213ENST00000614929 NKTRP30414 1462 aaKnown RBP29.48■■■□□ 2.31
SNX21-213ENST00000614929 HDGFP51858 240 aaKnown RBP29.48■■■□□ 2.31
SNX21-213ENST00000614929 SPHKAPQ2M3C7 1700 aa29.47■■■□□ 2.31
SNX21-213ENST00000614929 TMEM94Q12767 1356 aa29.44■■■□□ 2.3
SNX21-213ENST00000614929 MED1Q15648 1581 aaPredicted RBP29.43■■■□□ 2.3
SNX21-213ENST00000614929 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.42■■■□□ 2.3
SNX21-213ENST00000614929 NAIPQ13075 1403 aa29.41■■■□□ 2.3
SNX21-213ENST00000614929 PPP1R15AO75807 674 aaPredicted RBP29.4■■■□□ 2.3
SNX21-213ENST00000614929 DIP2AQ14689 1571 aa29.39■■■□□ 2.3
SNX21-213ENST00000614929 BCANQ96GW7 911 aa29.39■■■□□ 2.3
SNX21-213ENST00000614929 CHGAP10645 457 aaKnown RBP29.38■■■□□ 2.29
SNX21-213ENST00000614929 PROSER2Q86WR7 435 aaPredicted RBP29.38■■■□□ 2.29
SNX21-213ENST00000614929 TBX22Q9Y458 520 aa29.38■■■□□ 2.29
SNX21-213ENST00000614929 ADAMTS13Q76LX8 1427 aa29.37■■■□□ 2.29
SNX21-213ENST00000614929 FAM135BQ49AJ0 1406 aa29.36■■■□□ 2.29
SNX21-213ENST00000614929 SOCS7O14512 581 aa29.34■■■□□ 2.29
SNX21-213ENST00000614929 HFM1A2PYH4 1435 aa29.32■■■□□ 2.28
SNX21-213ENST00000614929 PIK3R4Q99570 1358 aa29.32■■■□□ 2.28
SNX21-213ENST00000614929 TRPM2O94759 1503 aa29.3■■■□□ 2.28
SNX21-213ENST00000614929 ROBO1Q9Y6N7 1651 aa29.29■■■□□ 2.28
SNX21-213ENST00000614929 RBM33Q96EV2 1170 aaKnown RBP29.29■■■□□ 2.28
SNX21-213ENST00000614929 NCOA3Q9Y6Q9 1424 aa29.28■■■□□ 2.28
SNX21-213ENST00000614929 CLTCL1P53675 1640 aa29.28■■■□□ 2.28
SNX21-213ENST00000614929 NUTM2DQ5VT03 806 aaPredicted RBP29.28■■■□□ 2.28
SNX21-213ENST00000614929 SENP3Q9H4L4 574 aaPredicted RBP29.28■■■□□ 2.28
SNX21-213ENST00000614929 MSH6P52701 1360 aa29.27■■■□□ 2.28
SNX21-213ENST00000614929 NRXN3Q9Y4C0 1643 aa29.27■■■□□ 2.28
SNX21-213ENST00000614929 KIF1BO60333 1816 aa29.26■■■□□ 2.27
SNX21-213ENST00000614929 SETBP1Q9Y6X0 1596 aa29.26■■■□□ 2.27
SNX21-213ENST00000614929 NEXMIFQ5QGS0 1516 aa29.2■■■□□ 2.27
SNX21-213ENST00000614929 XRN1Q8IZH2 1706 aaKnown RBP29.19■■■□□ 2.26
SNX21-213ENST00000614929 PTPRUQ92729 1446 aa29.19■■■□□ 2.26
SNX21-213ENST00000614929 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.18■■■□□ 2.26
SNX21-213ENST00000614929 SLAIN2Q9P270 581 aa29.16■■■□□ 2.26
SNX21-213ENST00000614929 ZNF326Q5BKZ1 582 aaKnown RBP29.15■■■□□ 2.26
SNX21-213ENST00000614929 TRIM52Q96A61 297 aa29.13■■■□□ 2.25
SNX21-213ENST00000614929 AMOTL2Q9Y2J4 779 aa29.13■■■□□ 2.25
SNX21-213ENST00000614929 PHLPP1O60346 1717 aa29.12■■■□□ 2.25
SNX21-213ENST00000614929 PHF23Q9BUL5 403 aaPredicted RBP29.11■■■□□ 2.25
SNX21-213ENST00000614929 C19orf44Q9H6X5 657 aa29.1■■■□□ 2.25
SNX21-213ENST00000614929 SLC4A1APQ9BWU0 796 aaKnown RBP29.09■■■□□ 2.25
SNX21-213ENST00000614929 CADPS2Q86UW7 1296 aa29.07■■■□□ 2.24
SNX21-213ENST00000614929 SETD1AO15047 1707 aaKnown RBP29.06■■■□□ 2.24
SNX21-213ENST00000614929 METP08581 1390 aa29.06■■■□□ 2.24
SNX21-213ENST00000614929 C14orf37Q86TY3 774 aa29.06■■■□□ 2.24
SNX21-213ENST00000614929 COL16A1Q07092 1604 aaPredicted RBP29.05■■■□□ 2.24
SNX21-213ENST00000614929 DCCP43146 1447 aa29.05■■■□□ 2.24
SNX21-213ENST00000614929 PPLO60437 1756 aa29.05■■■□□ 2.24
SNX21-213ENST00000614929 ATF3P18847 181 aa29.02■■■□□ 2.24
SNX21-213ENST00000614929 AHDC1Q5TGY3 1603 aaPredicted RBP29.02■■■□□ 2.24
SNX21-213ENST00000614929 RPGRIP1LQ68CZ1 1315 aa29■■■□□ 2.23
SNX21-213ENST00000614929 VGFO15240 615 aaPredicted RBP28.99■■■□□ 2.23
SNX21-213ENST00000614929 RGS17Q9UGC6 210 aaPredicted RBP28.99■■■□□ 2.23
SNX21-213ENST00000614929 JCADQ9P266 1359 aa28.98■■■□□ 2.23
SNX21-213ENST00000614929 NALCNQ8IZF0 1738 aa28.96■■■□□ 2.23
SNX21-213ENST00000614929 PRAG1Q86YV5 1406 aa28.95■■■□□ 2.23
SNX21-213ENST00000614929 ADGRL3Q9HAR2 1447 aa28.94■■■□□ 2.22
SNX21-213ENST00000614929 PTCH1Q13635 1447 aa28.93■■■□□ 2.22
SNX21-213ENST00000614929 SHPRHQ149N8 1683 aa28.93■■■□□ 2.22
SNX21-213ENST00000614929 MST1RQ04912 1400 aa28.92■■■□□ 2.22
SNX21-213ENST00000614929 IFT172Q9UG01 1749 aa28.91■■■□□ 2.22
SNX21-213ENST00000614929 FOXD1Q16676 465 aa28.91■■■□□ 2.22
SNX21-213ENST00000614929 MPHOSPH9Q99550 1183 aa28.91■■■□□ 2.22
SNX21-213ENST00000614929 CCDC144AA2RUR9 1427 aa28.91■■■□□ 2.22
SNX21-213ENST00000614929 ACIN1Q9UKV3 1341 aaKnown RBP28.91■■■□□ 2.22
SNX21-213ENST00000614929 BRINP3Q76B58 766 aa28.9■■■□□ 2.22
SNX21-213ENST00000614929 ASXL1Q8IXJ9 1541 aa28.89■■■□□ 2.22
SNX21-213ENST00000614929 SPATA31E1Q6ZUB1 1445 aa28.89■■■□□ 2.22
SNX21-213ENST00000614929 NHSL1Q5SYE7 1610 aa28.89■■■□□ 2.22
SNX21-213ENST00000614929 SPATA31A6Q5VVP1 1343 aa28.85■■■□□ 2.21
SNX21-213ENST00000614929 SETD5Q9C0A6 1442 aa28.85■■■□□ 2.21
SNX21-213ENST00000614929 ROBO2Q9HCK4 1378 aa28.84■■■□□ 2.21
SNX21-213ENST00000614929 LRP6O75581 1613 aa28.81■■■□□ 2.2
SNX21-213ENST00000614929 ANKRD30BQ9BXX2 1392 aa28.8■■■□□ 2.2
SNX21-213ENST00000614929 POTEAQ6S8J7 498 aa28.8■■■□□ 2.2
SNX21-213ENST00000614929 LAMC1P11047 1609 aa28.79■■■□□ 2.2
SNX21-213ENST00000614929 ADGRF5Q8IZF2 1346 aa28.78■■■□□ 2.2
SNX21-213ENST00000614929 C1orf167Q5SNV9 1468 aa28.76■■■□□ 2.19
SNX21-213ENST00000614929 KNDC1Q76NI1 1749 aa28.74■■■□□ 2.19
SNX21-213ENST00000614929 RGL3Q3MIN7 710 aa28.74■■■□□ 2.19
SNX21-213ENST00000614929 TECPR2O15040 1411 aa28.73■■■□□ 2.19
SNX21-213ENST00000614929 PIK3C2GO75747 1445 aa28.73■■■□□ 2.19
SNX21-213ENST00000614929 RAB3GAP2Q9H2M9 1393 aa28.72■■■□□ 2.19
SNX21-213ENST00000614929 CDC42BPGQ6DT37 1551 aa28.71■■■□□ 2.19
SNX21-213ENST00000614929 LRRC59Q96AG4 307 aaKnown RBP28.69■■■□□ 2.18
SNX21-213ENST00000614929 LRPPRCP42704 1394 aaKnown RBP28.68■■■□□ 2.18
SNX21-213ENST00000614929 NRXN1Q9ULB1 1477 aa28.66■■■□□ 2.18
SNX21-213ENST00000614929 ABCC11Q96J66 1382 aa28.66■■■□□ 2.18
SNX21-213ENST00000614929 MEX3CQ5U5Q3 659 aaKnown RBP28.65■■■□□ 2.18
SNX21-213ENST00000614929 MYOM2P54296 1465 aa28.65■■■□□ 2.18
SNX21-213ENST00000614929 DDX17Q92841 729 aaKnown RBP28.64■■■□□ 2.18
SNX21-213ENST00000614929 PNPLA6Q8IY17 1366 aa28.63■■■□□ 2.17
SNX21-213ENST00000614929 ZNF772Q68DY9 489 aaPredicted RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms