RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 TET3O43151 1660 aa27.45■■□□□ 1.98
SMN2-213ENST00000614240 XIRP1Q702N8 1843 aaKnown RBP27.44■■□□□ 1.98
SMN2-213ENST00000614240 FAM135BQ49AJ0 1406 aa27.42■■□□□ 1.98
SMN2-213ENST00000614240 RIMS2Q9UQ26 1411 aa27.4■■□□□ 1.98
SMN2-213ENST00000614240 ITGAEP38570 1179 aa27.39■■□□□ 1.98
SMN2-213ENST00000614240 PLEKHG1Q9ULL1 1385 aa27.38■■□□□ 1.97
SMN2-213ENST00000614240 NKTRP30414 1462 aaKnown RBP27.38■■□□□ 1.97
SMN2-213ENST00000614240 MSH6P52701 1360 aa27.37■■□□□ 1.97
SMN2-213ENST00000614240 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.37■■□□□ 1.97
SMN2-213ENST00000614240 ROCK1Q13464 1354 aa27.36■■□□□ 1.97
SMN2-213ENST00000614240 ZFYVE9O95405 1425 aa27.36■■□□□ 1.97
SMN2-213ENST00000614240 UNC13BO14795 1591 aa27.34■■□□□ 1.97
SMN2-213ENST00000614240 NUTM2DQ5VT03 806 aaPredicted RBP27.33■■□□□ 1.97
SMN2-213ENST00000614240 GCC2Q8IWJ2 1684 aa27.33■■□□□ 1.97
SMN2-213ENST00000614240 NWD1Q149M9 1564 aa27.32■■□□□ 1.96
SMN2-213ENST00000614240 PPARGC1BQ86YN6 1023 aaKnown RBP27.32■■□□□ 1.96
SMN2-213ENST00000614240 TBX22Q9Y458 520 aa27.32■■□□□ 1.96
SMN2-213ENST00000614240 NUP155O75694 1391 aa27.32■■□□□ 1.96
SMN2-213ENST00000614240 TMEM131LA2VDJ0 1609 aa27.31■■□□□ 1.96
SMN2-213ENST00000614240 C14orf37Q86TY3 774 aa27.31■■□□□ 1.96
SMN2-213ENST00000614240 SLAIN2Q9P270 581 aa27.31■■□□□ 1.96
SMN2-213ENST00000614240 ROBO1Q9Y6N7 1651 aa27.29■■□□□ 1.96
SMN2-213ENST00000614240 MYO5BQ9ULV0 1848 aa27.29■■□□□ 1.96
SMN2-213ENST00000614240 RGS17Q9UGC6 210 aaPredicted RBP27.27■■□□□ 1.96
SMN2-213ENST00000614240 E9PCH4 1651 aa27.27■■□□□ 1.96
SMN2-213ENST00000614240 IQGAP3Q86VI3 1631 aa27.24■■□□□ 1.95
SMN2-213ENST00000614240 CHD2O14647 1828 aaKnown RBP27.22■■□□□ 1.95
SMN2-213ENST00000614240 ADAMTS13Q76LX8 1427 aa27.2■■□□□ 1.94
SMN2-213ENST00000614240 NCOA3Q9Y6Q9 1424 aa27.19■■□□□ 1.94
SMN2-213ENST00000614240 ATF3P18847 181 aa27.18■■□□□ 1.94
SMN2-213ENST00000614240 PIK3R4Q99570 1358 aa27.18■■□□□ 1.94
SMN2-213ENST00000614240 CADPS2Q86UW7 1296 aa27.17■■□□□ 1.94
SMN2-213ENST00000614240 ZNF326Q5BKZ1 582 aaKnown RBP27.16■■□□□ 1.94
SMN2-213ENST00000614240 C19orf44Q9H6X5 657 aa27.16■■□□□ 1.94
SMN2-213ENST00000614240 AMOTL2Q9Y2J4 779 aa27.16■■□□□ 1.94
SMN2-213ENST00000614240 DIP2AQ14689 1571 aa27.15■■□□□ 1.94
SMN2-213ENST00000614240 JCADQ9P266 1359 aa27.15■■□□□ 1.94
SMN2-213ENST00000614240 PHLPP1O60346 1717 aa27.14■■□□□ 1.94
SMN2-213ENST00000614240 POTEAQ6S8J7 498 aa27.14■■□□□ 1.94
SMN2-213ENST00000614240 TRPM2O94759 1503 aa27.12■■□□□ 1.93
SMN2-213ENST00000614240 MEX3CQ5U5Q3 659 aaKnown RBP27.06■■□□□ 1.92
SMN2-213ENST00000614240 PTPRUQ92729 1446 aa27.06■■□□□ 1.92
SMN2-213ENST00000614240 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.04■■□□□ 1.92
SMN2-213ENST00000614240 SPATA31A6Q5VVP1 1343 aa27.03■■□□□ 1.92
SMN2-213ENST00000614240 SPHKAPQ2M3C7 1700 aa27.02■■□□□ 1.92
SMN2-213ENST00000614240 COL16A1Q07092 1604 aaPredicted RBP27.01■■□□□ 1.92
SMN2-213ENST00000614240 BRINP3Q76B58 766 aa27■■□□□ 1.91
SMN2-213ENST00000614240 TRIM52Q96A61 297 aa26.99■■□□□ 1.91
SMN2-213ENST00000614240 METP08581 1390 aa26.98■■□□□ 1.91
SMN2-213ENST00000614240 SETBP1Q9Y6X0 1596 aa26.98■■□□□ 1.91
SMN2-213ENST00000614240 RRBP1Q9P2E9 1410 aaKnown RBP26.97■■□□□ 1.91
SMN2-213ENST00000614240 AHDC1Q5TGY3 1603 aaPredicted RBP26.96■■□□□ 1.91
SMN2-213ENST00000614240 DCCP43146 1447 aa26.96■■□□□ 1.91
SMN2-213ENST00000614240 NRXN3Q9Y4C0 1643 aa26.94■■□□□ 1.9
SMN2-213ENST00000614240 NAIPQ13075 1403 aa26.94■■□□□ 1.9
SMN2-213ENST00000614240 ZNF772Q68DY9 489 aaPredicted RBP26.94■■□□□ 1.9
SMN2-213ENST00000614240 NUTM2BA6NNL0 878 aaPredicted RBP26.93■■□□□ 1.9
SMN2-213ENST00000614240 NUTM2EB1AL46 878 aaPredicted RBP26.93■■□□□ 1.9
SMN2-213ENST00000614240 NUTM2AQ8IVF1 878 aaPredicted RBP26.93■■□□□ 1.9
SMN2-213ENST00000614240 LRP6O75581 1613 aa26.92■■□□□ 1.9
SMN2-213ENST00000614240 CLTCL1P53675 1640 aa26.92■■□□□ 1.9
SMN2-213ENST00000614240 XRN1Q8IZH2 1706 aaKnown RBP26.92■■□□□ 1.9
SMN2-213ENST00000614240 VGFO15240 615 aaPredicted RBP26.9■■□□□ 1.9
SMN2-213ENST00000614240 NEXMIFQ5QGS0 1516 aa26.9■■□□□ 1.9
SMN2-213ENST00000614240 MST1RQ04912 1400 aa26.89■■□□□ 1.89
SMN2-213ENST00000614240 SLC4A1APQ9BWU0 796 aaKnown RBP26.88■■□□□ 1.89
SMN2-213ENST00000614240 ASXL1Q8IXJ9 1541 aa26.88■■□□□ 1.89
SMN2-213ENST00000614240 SHPRHQ149N8 1683 aa26.86■■□□□ 1.89
SMN2-213ENST00000614240 LRRC59Q96AG4 307 aaKnown RBP26.86■■□□□ 1.89
SMN2-213ENST00000614240 ADGRL3Q9HAR2 1447 aa26.86■■□□□ 1.89
SMN2-213ENST00000614240 KIF1BO60333 1816 aa26.85■■□□□ 1.89
SMN2-213ENST00000614240 HFM1A2PYH4 1435 aa26.83■■□□□ 1.89
SMN2-213ENST00000614240 DDX17Q92841 729 aaKnown RBP26.82■■□□□ 1.88
SMN2-213ENST00000614240 RPGRIP1LQ68CZ1 1315 aa26.82■■□□□ 1.88
SMN2-213ENST00000614240 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
SMN2-213ENST00000614240 RXRBP28702 533 aa26.81■■□□□ 1.88
SMN2-213ENST00000614240 SETD1AO15047 1707 aaKnown RBP26.79■■□□□ 1.88
SMN2-213ENST00000614240 AFF2P51816 1311 aa26.77■■□□□ 1.88
SMN2-213ENST00000614240 ROBO2Q9HCK4 1378 aa26.75■■□□□ 1.87
SMN2-213ENST00000614240 C1orf167Q5SNV9 1468 aa26.74■■□□□ 1.87
SMN2-213ENST00000614240 PTCH1Q13635 1447 aa26.74■■□□□ 1.87
SMN2-213ENST00000614240 NALCNQ8IZF0 1738 aa26.74■■□□□ 1.87
SMN2-213ENST00000614240 FOXD1Q16676 465 aa26.74■■□□□ 1.87
SMN2-213ENST00000614240 C8orf37Q96NL8 207 aa26.74■■□□□ 1.87
SMN2-213ENST00000614240 NHSL1Q5SYE7 1610 aa26.74■■□□□ 1.87
SMN2-213ENST00000614240 PNPLA6Q8IY17 1366 aa26.72■■□□□ 1.87
SMN2-213ENST00000614240 ORAI2Q96SN7 254 aa26.71■■□□□ 1.87
SMN2-213ENST00000614240 UPF1Q92900 1129 aaKnown RBP eCLIP26.69■■□□□ 1.86
SMN2-213ENST00000614240 ADAMTS2O95450 1211 aa26.68■■□□□ 1.86
SMN2-213ENST00000614240 RGL3Q3MIN7 710 aa26.68■■□□□ 1.86
SMN2-213ENST00000614240 NGLY1Q96IV0 654 aa26.67■■□□□ 1.86
SMN2-213ENST00000614240 QTRT2Q9H974 415 aaKnown RBP26.67■■□□□ 1.86
SMN2-213ENST00000614240 CCDC144AA2RUR9 1427 aa26.66■■□□□ 1.86
SMN2-213ENST00000614240 STK26Q9P289 416 aa26.64■■□□□ 1.86
SMN2-213ENST00000614240 SOS2Q07890 1332 aaPredicted RBP26.64■■□□□ 1.85
SMN2-213ENST00000614240 ADGRF5Q8IZF2 1346 aa26.64■■□□□ 1.85
SMN2-213ENST00000614240 PPLO60437 1756 aa26.63■■□□□ 1.85
SMN2-213ENST00000614240 CDK12Q9NYV4 1490 aaPredicted RBP26.63■■□□□ 1.85
SMN2-213ENST00000614240 MPHOSPH9Q99550 1183 aa26.63■■□□□ 1.85
SMN2-213ENST00000614240 PRAG1Q86YV5 1406 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms