RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 IDI1Q13907 227 aa18.49■□□□□ 0.55
PRKN-210ENST00000612540 THEMISQ8N1K5 641 aaPredicted RBP18.48■□□□□ 0.55
PRKN-210ENST00000612540 UBAP1LF5GYI3 381 aa18.47■□□□□ 0.55
PRKN-210ENST00000612540 ZNF326Q5BKZ1 582 aaKnown RBP18.47■□□□□ 0.55
PRKN-210ENST00000612540 ILDR2Q71H61 639 aa18.47■□□□□ 0.55
PRKN-210ENST00000612540 ANKLE2Q86XL3 938 aa18.47■□□□□ 0.55
PRKN-210ENST00000612540 SPATA31E1Q6ZUB1 1445 aa18.47■□□□□ 0.55
PRKN-210ENST00000612540 MED14O60244 1454 aa18.46■□□□□ 0.55
PRKN-210ENST00000612540 TMEM131LA2VDJ0 1609 aa18.46■□□□□ 0.55
PRKN-210ENST00000612540 IQGAP1P46940 1657 aa18.46■□□□□ 0.55
PRKN-210ENST00000612540 L3MBTL2Q969R5 705 aa18.45■□□□□ 0.54
PRKN-210ENST00000612540 CPS1P31327 1500 aa18.44■□□□□ 0.54
PRKN-210ENST00000612540 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
PRKN-210ENST00000612540 UBR1Q8IWV7 1749 aa18.43■□□□□ 0.54
PRKN-210ENST00000612540 STRCP1A6NGW2 1772 aa18.43■□□□□ 0.54
PRKN-210ENST00000612540 NPHP4O75161 1426 aaPredicted RBP18.43■□□□□ 0.54
PRKN-210ENST00000612540 KDM5AP29375 1690 aaKnown RBP18.41■□□□□ 0.54
PRKN-210ENST00000612540 PPLO60437 1756 aa18.41■□□□□ 0.54
PRKN-210ENST00000612540 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
PRKN-210ENST00000612540 KDM2AQ9Y2K7 1162 aa18.41■□□□□ 0.54
PRKN-210ENST00000612540 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
PRKN-210ENST00000612540 NEXMIFQ5QGS0 1516 aa18.37■□□□□ 0.53
PRKN-210ENST00000612540 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
PRKN-210ENST00000612540 RIMS2Q9UQ26 1411 aa18.35■□□□□ 0.53
PRKN-210ENST00000612540 RPGRIP1LQ68CZ1 1315 aa18.35■□□□□ 0.53
PRKN-210ENST00000612540 PPP1R15AO75807 674 aaPredicted RBP18.35■□□□□ 0.53
PRKN-210ENST00000612540 NUTM2DQ5VT03 806 aaPredicted RBP18.35■□□□□ 0.53
PRKN-210ENST00000612540 MYOM2P54296 1465 aa18.34■□□□□ 0.53
PRKN-210ENST00000612540 SOCS7O14512 581 aa18.34■□□□□ 0.53
PRKN-210ENST00000612540 TOM1O60784 492 aa18.34■□□□□ 0.53
PRKN-210ENST00000612540 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.53
PRKN-210ENST00000612540 SLIT1O75093 1534 aa18.33■□□□□ 0.52
PRKN-210ENST00000612540 ALKQ9UM73 1620 aa18.32■□□□□ 0.52
PRKN-210ENST00000612540 PIP4K2BP78356 416 aa18.32■□□□□ 0.52
PRKN-210ENST00000612540 XIRP1Q702N8 1843 aaKnown RBP18.32■□□□□ 0.52
PRKN-210ENST00000612540 SCAF11Q99590 1463 aaKnown RBP18.32■□□□□ 0.52
PRKN-210ENST00000612540 TMEM2Q9UHN6 1383 aa18.31■□□□□ 0.52
PRKN-210ENST00000612540 PRAG1Q86YV5 1406 aa18.31■□□□□ 0.52
PRKN-210ENST00000612540 LTKP29376 864 aa18.3■□□□□ 0.52
PRKN-210ENST00000612540 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
PRKN-210ENST00000612540 ZFYVE9O95405 1425 aa18.3■□□□□ 0.52
PRKN-210ENST00000612540 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
PRKN-210ENST00000612540 LRRC7Q96NW7 1537 aa18.29■□□□□ 0.52
PRKN-210ENST00000612540 ADGRF5Q8IZF2 1346 aa18.29■□□□□ 0.52
PRKN-210ENST00000612540 VGFO15240 615 aaPredicted RBP18.29■□□□□ 0.52
PRKN-210ENST00000612540 HSPA1LP34931 641 aa18.29■□□□□ 0.52
PRKN-210ENST00000612540 NBPF8Q3BBV2 869 aa18.29■□□□□ 0.52
PRKN-210ENST00000612540 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
PRKN-210ENST00000612540 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
PRKN-210ENST00000612540 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
PRKN-210ENST00000612540 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
PRKN-210ENST00000612540 TXNDC2Q86VQ3 553 aa18.27■□□□□ 0.52
PRKN-210ENST00000612540 TRPM1Q7Z4N2 1603 aa18.27■□□□□ 0.51
PRKN-210ENST00000612540 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
PRKN-210ENST00000612540 BCANQ96GW7 911 aa18.25■□□□□ 0.51
PRKN-210ENST00000612540 RALGAPBQ86X10 1494 aa18.25■□□□□ 0.51
PRKN-210ENST00000612540 PIK3C2GO75747 1445 aa18.24■□□□□ 0.51
PRKN-210ENST00000612540 KIAA1210Q9ULL0 1709 aa18.23■□□□□ 0.51
PRKN-210ENST00000612540 LAMC1P11047 1609 aa18.23■□□□□ 0.51
PRKN-210ENST00000612540 ROCK2O75116 1388 aaKnown RBP18.22■□□□□ 0.51
PRKN-210ENST00000612540 PLEKHG1Q9ULL1 1385 aa18.2■□□□□ 0.5
PRKN-210ENST00000612540 CFAP70Q5T0N1 1121 aa18.2■□□□□ 0.5
PRKN-210ENST00000612540 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
PRKN-210ENST00000612540 NRXN3Q9Y4C0 1643 aa18.19■□□□□ 0.5
PRKN-210ENST00000612540 NBPF1Q3BBV0 1214 aa18.17■□□□□ 0.5
PRKN-210ENST00000612540 CARD11Q9BXL7 1154 aa18.17■□□□□ 0.5
PRKN-210ENST00000612540 C14orf93Q9H972 538 aaKnown RBP18.16■□□□□ 0.5
PRKN-210ENST00000612540 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
PRKN-210ENST00000612540 DIP2AQ14689 1571 aa18.13■□□□□ 0.49
PRKN-210ENST00000612540 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
PRKN-210ENST00000612540 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
PRKN-210ENST00000612540 KCNA6P17658 529 aa18.12■□□□□ 0.49
PRKN-210ENST00000612540 TMEM132EQ6IEE7 984 aa18.12■□□□□ 0.49
PRKN-210ENST00000612540 SLC26A8Q96RN1 970 aa18.12■□□□□ 0.49
PRKN-210ENST00000612540 ADAMTS13Q76LX8 1427 aa18.12■□□□□ 0.49
PRKN-210ENST00000612540 ADGRB1O14514 1584 aa18.12■□□□□ 0.49
PRKN-210ENST00000612540 TMEM94Q12767 1356 aa18.1■□□□□ 0.49
PRKN-210ENST00000612540 USP47Q96K76 1375 aa18.1■□□□□ 0.49
PRKN-210ENST00000612540 CHD2O14647 1828 aaKnown RBP18.09■□□□□ 0.49
PRKN-210ENST00000612540 NWD1Q149M9 1564 aa18.09■□□□□ 0.49
PRKN-210ENST00000612540 EIF4G2P78344 907 aaKnown RBP eCLIP18.09■□□□□ 0.49
PRKN-210ENST00000612540 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
PRKN-210ENST00000612540 STK26Q9P289 416 aa18.08■□□□□ 0.48
PRKN-210ENST00000612540 METP08581 1390 aa18.07■□□□□ 0.48
PRKN-210ENST00000612540 ROBO1Q9Y6N7 1651 aa18.07■□□□□ 0.48
PRKN-210ENST00000612540 NKTRP30414 1462 aaKnown RBP18.07■□□□□ 0.48
PRKN-210ENST00000612540 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
PRKN-210ENST00000612540 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
PRKN-210ENST00000612540 EIF3AQ14152 1382 aaKnown RBP18.06■□□□□ 0.48
PRKN-210ENST00000612540 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
PRKN-210ENST00000612540 TRAK1Q9UPV9 953 aa18.06■□□□□ 0.48
PRKN-210ENST00000612540 TBX22Q9Y458 520 aa18.06■□□□□ 0.48
PRKN-210ENST00000612540 ARHGEF28Q8N1W1 1705 aaKnown RBP18.06■□□□□ 0.48
PRKN-210ENST00000612540 PROSER2Q86WR7 435 aaPredicted RBP18.05■□□□□ 0.48
PRKN-210ENST00000612540 HIRIP3Q9BW71 556 aaPredicted RBP18.05■□□□□ 0.48
PRKN-210ENST00000612540 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
PRKN-210ENST00000612540 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
PRKN-210ENST00000612540 RBM33Q96EV2 1170 aaKnown RBP18.03■□□□□ 0.48
PRKN-210ENST00000612540 PIK3R4Q99570 1358 aa18.01■□□□□ 0.47
PRKN-210ENST00000612540 PHLPP1O60346 1717 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms