RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 MARCH6O60337 910 aa25.64■■□□□ 1.69
SMAD6-205ENST00000612349 RIPK4P57078 832 aa25.64■■□□□ 1.69
SMAD6-205ENST00000612349 MIA2Q96PC5 1412 aa25.64■■□□□ 1.69
SMAD6-205ENST00000612349 ROCK1Q13464 1354 aa25.63■■□□□ 1.69
SMAD6-205ENST00000612349 EIF2S2P20042 333 aaKnown RBP25.63■■□□□ 1.69
SMAD6-205ENST00000612349 RRP1P56182 461 aaKnown RBP25.63■■□□□ 1.69
SMAD6-205ENST00000612349 ATP6V1DQ9Y5K8 247 aa25.63■■□□□ 1.69
SMAD6-205ENST00000612349 DIAPH3Q9NSV4 1193 aa25.62■■□□□ 1.69
SMAD6-205ENST00000612349 ATF3P18847 181 aa25.62■■□□□ 1.69
SMAD6-205ENST00000612349 GOLGA6L3A6NEY3 463 aa25.62■■□□□ 1.69
SMAD6-205ENST00000612349 CPLX2Q6PUV4 134 aaKnown RBP25.62■■□□□ 1.69
SMAD6-205ENST00000612349 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
SMAD6-205ENST00000612349 RUNDC1Q96C34 613 aa25.61■■□□□ 1.69
SMAD6-205ENST00000612349 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
SMAD6-205ENST00000612349 FAM161AQ3B820 660 aa25.61■■□□□ 1.69
SMAD6-205ENST00000612349 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
SMAD6-205ENST00000612349 AKAP17AQ02040 695 aaKnown RBP25.6■■□□□ 1.69
SMAD6-205ENST00000612349 RAPGEF4Q8WZA2 1011 aa25.6■■□□□ 1.69
SMAD6-205ENST00000612349 NOL10Q9BSC4 688 aaKnown RBP25.6■■□□□ 1.69
SMAD6-205ENST00000612349 GNAI1P63096 354 aa25.6■■□□□ 1.69
SMAD6-205ENST00000612349 SYNE3Q6ZMZ3 975 aa25.6■■□□□ 1.69
SMAD6-205ENST00000612349 AMOTL1Q8IY63 956 aa25.59■■□□□ 1.69
SMAD6-205ENST00000612349 COG6Q9Y2V7 657 aa25.59■■□□□ 1.69
SMAD6-205ENST00000612349 FAM184AQ8NB25 1140 aa25.58■■□□□ 1.69
SMAD6-205ENST00000612349 ARHGAP5Q13017 1502 aa25.58■■□□□ 1.69
SMAD6-205ENST00000612349 H3BQV1 296 aa25.58■■□□□ 1.69
SMAD6-205ENST00000612349 IFFO2Q5TF58 517 aa25.58■■□□□ 1.69
SMAD6-205ENST00000612349 REC8O95072 547 aa25.58■■□□□ 1.68
SMAD6-205ENST00000612349 DZIP1LQ8IYY4 767 aaKnown RBP25.57■■□□□ 1.68
SMAD6-205ENST00000612349 TOPBP1Q92547 1522 aa25.57■■□□□ 1.68
SMAD6-205ENST00000612349 NCBP3Q53F19 620 aaKnown RBP25.57■■□□□ 1.68
SMAD6-205ENST00000612349 MSH5O43196 834 aa25.56■■□□□ 1.68
SMAD6-205ENST00000612349 ZKSCAN1P17029 563 aaPredicted RBP25.56■■□□□ 1.68
SMAD6-205ENST00000612349 KIF7Q2M1P5 1343 aa25.55■■□□□ 1.68
SMAD6-205ENST00000612349 DDX11L8A8MPP1 907 aa25.55■■□□□ 1.68
SMAD6-205ENST00000612349 IFIT2P09913 472 aaKnown RBP25.55■■□□□ 1.68
SMAD6-205ENST00000612349 FKBP5Q13451 457 aaPredicted RBP25.55■■□□□ 1.68
SMAD6-205ENST00000612349 FOXD4L1Q9NU39 408 aa25.54■■□□□ 1.68
SMAD6-205ENST00000612349 HSP90AB4PQ58FF6 505 aa25.54■■□□□ 1.68
SMAD6-205ENST00000612349 HMGXB3Q12766 1538 aa25.54■■□□□ 1.68
SMAD6-205ENST00000612349 CC2D2AQ9P2K1 1620 aa25.54■■□□□ 1.68
SMAD6-205ENST00000612349 CCDC7Q96M83 1385 aa25.53■■□□□ 1.68
SMAD6-205ENST00000612349 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
SMAD6-205ENST00000612349 CRBNQ96SW2 442 aa25.53■■□□□ 1.68
SMAD6-205ENST00000612349 PLIN1O60240 522 aa25.53■■□□□ 1.68
SMAD6-205ENST00000612349 NOC3LQ8WTT2 800 aaKnown RBP25.53■■□□□ 1.68
SMAD6-205ENST00000612349 TMEM132EQ6IEE7 984 aa25.52■■□□□ 1.68
SMAD6-205ENST00000612349 VPS53Q5VIR6 699 aa25.52■■□□□ 1.68
SMAD6-205ENST00000612349 G3BP1Q13283 466 aaKnown RBP eCLIP25.52■■□□□ 1.68
SMAD6-205ENST00000612349 SYTL4Q96C24 671 aaPredicted RBP25.52■■□□□ 1.68
SMAD6-205ENST00000612349 EXOC6Q8TAG9 804 aa25.51■■□□□ 1.68
SMAD6-205ENST00000612349 PRXQ9BXM0 1461 aa25.51■■□□□ 1.67
SMAD6-205ENST00000612349 AAMPQ13685 434 aa25.51■■□□□ 1.67
SMAD6-205ENST00000612349 TSPYL4Q9UJ04 414 aa25.5■■□□□ 1.67
SMAD6-205ENST00000612349 MEX3CQ5U5Q3 659 aaKnown RBP25.5■■□□□ 1.67
SMAD6-205ENST00000612349 RRBP1Q9P2E9 1410 aaKnown RBP25.49■■□□□ 1.67
SMAD6-205ENST00000612349 PDE4AP27815 886 aa25.49■■□□□ 1.67
SMAD6-205ENST00000612349 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.48■■□□□ 1.67
SMAD6-205ENST00000612349 RNF20Q5VTR2 975 aa25.47■■□□□ 1.67
SMAD6-205ENST00000612349 TPM3P06753 285 aa25.47■■□□□ 1.67
SMAD6-205ENST00000612349 EFCAB5A4FU69 1503 aa25.47■■□□□ 1.67
SMAD6-205ENST00000612349 VPS37DQ86XT2 251 aa25.47■■□□□ 1.67
SMAD6-205ENST00000612349 TRIM34Q9BYJ4 488 aa25.47■■□□□ 1.67
SMAD6-205ENST00000612349 CFAP70Q5T0N1 1121 aa25.47■■□□□ 1.67
SMAD6-205ENST00000612349 CEP89Q96ST8 783 aa25.47■■□□□ 1.67
SMAD6-205ENST00000612349 NLRP6P59044 892 aa25.46■■□□□ 1.67
SMAD6-205ENST00000612349 NLRP2Q9NX02 1062 aa25.46■■□□□ 1.67
SMAD6-205ENST00000612349 CREBRFQ8IUR6 639 aa25.46■■□□□ 1.67
SMAD6-205ENST00000612349 GGNBP2Q9H3C7 697 aa25.46■■□□□ 1.67
SMAD6-205ENST00000612349 CABP2Q9NPB3 220 aa25.46■■□□□ 1.67
SMAD6-205ENST00000612349 TRDNQ13061 729 aa25.45■■□□□ 1.66
SMAD6-205ENST00000612349 GPRASP1Q5JY77 1395 aa25.45■■□□□ 1.66
SMAD6-205ENST00000612349 SKOR2Q2VWA4 1001 aaPredicted RBP25.44■■□□□ 1.66
SMAD6-205ENST00000612349 NECTIN2Q92692 538 aa25.44■■□□□ 1.66
SMAD6-205ENST00000612349 TOP2BQ02880 1626 aa25.44■■□□□ 1.66
SMAD6-205ENST00000612349 TRIM29Q14134 588 aa25.44■■□□□ 1.66
SMAD6-205ENST00000612349 TROQ12816 1431 aaPredicted RBP25.43■■□□□ 1.66
SMAD6-205ENST00000612349 SNAPC4Q5SXM2 1469 aa25.42■■□□□ 1.66
SMAD6-205ENST00000612349 TPD52L1Q16890 204 aaPredicted RBP25.42■■□□□ 1.66
SMAD6-205ENST00000612349 APPP05067 770 aa25.42■■□□□ 1.66
SMAD6-205ENST00000612349 USP35Q9P2H5 1018 aa25.42■■□□□ 1.66
SMAD6-205ENST00000612349 ERC2O15083 957 aa25.41■■□□□ 1.66
SMAD6-205ENST00000612349 CPLX1O14810 134 aa25.41■■□□□ 1.66
SMAD6-205ENST00000612349 HFM1A2PYH4 1435 aa25.41■■□□□ 1.66
SMAD6-205ENST00000612349 HMOX1P09601 288 aa25.41■■□□□ 1.66
SMAD6-205ENST00000612349 FOXD4L5Q5VV16 416 aaPredicted RBP25.41■■□□□ 1.66
SMAD6-205ENST00000612349 FOXD4L4Q8WXT5 416 aaPredicted RBP25.41■■□□□ 1.66
SMAD6-205ENST00000612349 TXNDC2Q86VQ3 553 aa25.4■■□□□ 1.66
SMAD6-205ENST00000612349 DDX49Q9Y6V7 483 aaKnown RBP25.4■■□□□ 1.66
SMAD6-205ENST00000612349 PLEKHH2Q8IVE3 1493 aa25.4■■□□□ 1.66
SMAD6-205ENST00000612349 TSR1Q2NL82 804 aaKnown RBP25.4■■□□□ 1.66
SMAD6-205ENST00000612349 C9orf84Q5VXU9 1444 aa25.39■■□□□ 1.66
SMAD6-205ENST00000612349 RIC3Q7Z5B4 369 aa25.39■■□□□ 1.65
SMAD6-205ENST00000612349 CTDP1Q9Y5B0 961 aaPredicted RBP25.38■■□□□ 1.65
SMAD6-205ENST00000612349 GOLGA6L19H0YKK7 550 aa25.38■■□□□ 1.65
SMAD6-205ENST00000612349 SCAPERQ9BY12 1400 aa25.38■■□□□ 1.65
SMAD6-205ENST00000612349 MCTP1Q6DN14 999 aa25.37■■□□□ 1.65
SMAD6-205ENST00000612349 GAS2L2Q8NHY3 880 aa25.37■■□□□ 1.65
SMAD6-205ENST00000612349 BECN2A8MW95 431 aa25.37■■□□□ 1.65
SMAD6-205ENST00000612349 TPM2P07951 284 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms