RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 ANKRD45Q5TZF3 282 aa17.74■□□□□ 0.43
SYNRG-217ENST00000612223 ARID3AQ99856 593 aa17.74■□□□□ 0.43
SYNRG-217ENST00000612223 CCDC27Q2M243 656 aa17.74■□□□□ 0.43
SYNRG-217ENST00000612223 TCERG1O14776 1098 aaKnown RBP17.73■□□□□ 0.43
SYNRG-217ENST00000612223 AIMP1Q12904 312 aaKnown RBP17.73■□□□□ 0.43
SYNRG-217ENST00000612223 DIAPH3Q9NSV4 1193 aa17.73■□□□□ 0.43
SYNRG-217ENST00000612223 STRN4Q9NRL3 753 aa17.73■□□□□ 0.43
SYNRG-217ENST00000612223 PLIN1O60240 522 aa17.73■□□□□ 0.43
SYNRG-217ENST00000612223 TPM2P07951 284 aa17.73■□□□□ 0.43
SYNRG-217ENST00000612223 CCAR1Q8IX12 1150 aaKnown RBP17.72■□□□□ 0.43
SYNRG-217ENST00000612223 ST18O60284 1047 aa17.72■□□□□ 0.43
SYNRG-217ENST00000612223 IFIT2P09913 472 aaKnown RBP17.72■□□□□ 0.43
SYNRG-217ENST00000612223 TRIM29Q14134 588 aa17.72■□□□□ 0.43
SYNRG-217ENST00000612223 FOXD4L6Q3SYB3 417 aaPredicted RBP17.72■□□□□ 0.43
SYNRG-217ENST00000612223 FOXD4L3Q6VB84 417 aaPredicted RBP17.72■□□□□ 0.43
SYNRG-217ENST00000612223 MTMR7Q9Y216 660 aa17.72■□□□□ 0.43
SYNRG-217ENST00000612223 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.43
SYNRG-217ENST00000612223 TSR1Q2NL82 804 aaKnown RBP17.71■□□□□ 0.43
SYNRG-217ENST00000612223 PCMTD1Q96MG8 357 aaPredicted RBP17.7■□□□□ 0.42
SYNRG-217ENST00000612223 SLC4A3P48751 1232 aa17.7■□□□□ 0.42
SYNRG-217ENST00000612223 VPS8Q8N3P4 1428 aa17.7■□□□□ 0.42
SYNRG-217ENST00000612223 ST20-MTHFSA0A0A6YYL1 179 aa17.69■□□□□ 0.42
SYNRG-217ENST00000612223 RIC3Q7Z5B4 369 aa17.69■□□□□ 0.42
SYNRG-217ENST00000612223 RBM42Q9BTD8 480 aaKnown RBP17.69■□□□□ 0.42
SYNRG-217ENST00000612223 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
SYNRG-217ENST00000612223 CADPSQ9ULU8 1353 aa17.69■□□□□ 0.42
SYNRG-217ENST00000612223 NLRP13Q86W25 1043 aa17.69■□□□□ 0.42
SYNRG-217ENST00000612223 PROSER2Q86WR7 435 aaPredicted RBP17.69■□□□□ 0.42
SYNRG-217ENST00000612223 G3BP1Q13283 466 aaKnown RBP eCLIP17.69■□□□□ 0.42
SYNRG-217ENST00000612223 ESCO1Q5FWF5 840 aa17.69■□□□□ 0.42
SYNRG-217ENST00000612223 ERICH2A1L162 156 aa17.68■□□□□ 0.42
SYNRG-217ENST00000612223 IKQ13123 557 aaPredicted RBP17.68■□□□□ 0.42
SYNRG-217ENST00000612223 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.68■□□□□ 0.42
SYNRG-217ENST00000612223 CPLX2Q6PUV4 134 aaKnown RBP17.68■□□□□ 0.42
SYNRG-217ENST00000612223 TRDNQ13061 729 aa17.67■□□□□ 0.42
SYNRG-217ENST00000612223 FKBP5Q13451 457 aaPredicted RBP17.67■□□□□ 0.42
SYNRG-217ENST00000612223 GOLGA6L1Q8N7Z2 621 aa17.67■□□□□ 0.42
SYNRG-217ENST00000612223 NEUROD6Q96NK8 337 aa17.67■□□□□ 0.42
SYNRG-217ENST00000612223 ANO2Q9NQ90 1003 aa17.66■□□□□ 0.42
SYNRG-217ENST00000612223 RAPGEF2Q9Y4G8 1499 aa17.66■□□□□ 0.42
SYNRG-217ENST00000612223 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
SYNRG-217ENST00000612223 CPLX1O14810 134 aa17.65■□□□□ 0.42
SYNRG-217ENST00000612223 WASHC2AQ641Q2 1341 aa17.65■□□□□ 0.42
SYNRG-217ENST00000612223 CCDC47Q96A33 483 aaKnown RBP17.64■□□□□ 0.42
SYNRG-217ENST00000612223 HMOX1P09601 288 aa17.64■□□□□ 0.41
SYNRG-217ENST00000612223 RIPK4P57078 832 aa17.64■□□□□ 0.41
SYNRG-217ENST00000612223 CHMP4CQ96CF2 233 aa17.64■□□□□ 0.41
SYNRG-217ENST00000612223 NLRP6P59044 892 aa17.63■□□□□ 0.41
SYNRG-217ENST00000612223 RUFY2Q8WXA3 655 aa17.63■□□□□ 0.41
SYNRG-217ENST00000612223 FOSBP53539 338 aa17.63■□□□□ 0.41
SYNRG-217ENST00000612223 R3HCC1Q9Y3T6 440 aaKnown RBP17.63■□□□□ 0.41
SYNRG-217ENST00000612223 ZKSCAN2Q63HK3 967 aa17.62■□□□□ 0.41
SYNRG-217ENST00000612223 WASHC4Q2M389 1173 aa17.61■□□□□ 0.41
SYNRG-217ENST00000612223 TMEM132AQ24JP5 1023 aa17.61■□□□□ 0.41
SYNRG-217ENST00000612223 KIF15Q9NS87 1388 aa17.61■□□□□ 0.41
SYNRG-217ENST00000612223 KDM4AO75164 1064 aa17.6■□□□□ 0.41
SYNRG-217ENST00000612223 ABTB2Q8N961 1025 aa17.6■□□□□ 0.41
SYNRG-217ENST00000612223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.6■□□□□ 0.41
SYNRG-217ENST00000612223 TPM1P09493 284 aa17.6■□□□□ 0.41
SYNRG-217ENST00000612223 TXNDC2Q86VQ3 553 aa17.59■□□□□ 0.41
SYNRG-217ENST00000612223 GPRASP1Q5JY77 1395 aa17.59■□□□□ 0.41
SYNRG-217ENST00000612223 CCAR2Q8N163 923 aaKnown RBP17.59■□□□□ 0.41
SYNRG-217ENST00000612223 KIF6Q6ZMV9 814 aa17.59■□□□□ 0.41
SYNRG-217ENST00000612223 ZKSCAN1P17029 563 aaPredicted RBP17.58■□□□□ 0.41
SYNRG-217ENST00000612223 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.41
SYNRG-217ENST00000612223 PHF14O94880 888 aa17.58■□□□□ 0.41
SYNRG-217ENST00000612223 MYBBP1AQ9BQG0 1328 aaKnown RBP17.58■□□□□ 0.4
SYNRG-217ENST00000612223 GOLGA6L19H0YKK7 550 aa17.58■□□□□ 0.4
SYNRG-217ENST00000612223 CABP2Q9NPB3 220 aa17.58■□□□□ 0.4
SYNRG-217ENST00000612223 PHLDB1Q86UU1 1377 aa17.57■□□□□ 0.4
SYNRG-217ENST00000612223 BECN2A8MW95 431 aa17.57■□□□□ 0.4
SYNRG-217ENST00000612223 DHX57Q6P158 1386 aaKnown RBP17.56■□□□□ 0.4
SYNRG-217ENST00000612223 DDX54Q8TDD1 881 aaKnown RBP17.55■□□□□ 0.4
SYNRG-217ENST00000612223 APAF1O14727 1248 aa17.55■□□□□ 0.4
SYNRG-217ENST00000612223 E9PSI1 815 aa17.55■□□□□ 0.4
SYNRG-217ENST00000612223 COG6Q9Y2V7 657 aa17.55■□□□□ 0.4
SYNRG-217ENST00000612223 GOLGA6L3A6NEY3 463 aa17.54■□□□□ 0.4
SYNRG-217ENST00000612223 GGNBP2Q9H3C7 697 aa17.54■□□□□ 0.4
SYNRG-217ENST00000612223 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
SYNRG-217ENST00000612223 WWC2Q6AWC2 1192 aa17.54■□□□□ 0.4
SYNRG-217ENST00000612223 TMEM132EQ6IEE7 984 aa17.54■□□□□ 0.4
SYNRG-217ENST00000612223 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
SYNRG-217ENST00000612223 TOM1L2Q6ZVM7 507 aa17.53■□□□□ 0.4
SYNRG-217ENST00000612223 RNF20Q5VTR2 975 aa17.52■□□□□ 0.4
SYNRG-217ENST00000612223 RBM5P52756 815 aaKnown RBP eCLIP17.52■□□□□ 0.4
SYNRG-217ENST00000612223 ATP2B2Q01814 1243 aa17.52■□□□□ 0.4
SYNRG-217ENST00000612223 PAF1Q8N7H5 531 aa17.52■□□□□ 0.4
SYNRG-217ENST00000612223 API5Q9BZZ5 524 aaKnown RBP17.52■□□□□ 0.39
SYNRG-217ENST00000612223 CT47A1Q5JQC4 288 aaPredicted RBP17.51■□□□□ 0.39
SYNRG-217ENST00000612223 ANKRD20A12PQ8NF67 263 aa17.51■□□□□ 0.39
SYNRG-217ENST00000612223 RALYLQ86SE5 291 aaKnown RBP17.51■□□□□ 0.39
SYNRG-217ENST00000612223 ATP6V1DQ9Y5K8 247 aa17.51■□□□□ 0.39
SYNRG-217ENST00000612223 ZNF428Q96B54 188 aa17.51■□□□□ 0.39
SYNRG-217ENST00000612223 ODF2Q5BJF6 829 aa17.51■□□□□ 0.39
SYNRG-217ENST00000612223 SAFBQ15424 915 aaKnown RBP eCLIP17.5■□□□□ 0.39
SYNRG-217ENST00000612223 ZFYVE27Q5T4F4 411 aa17.49■□□□□ 0.39
SYNRG-217ENST00000612223 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
SYNRG-217ENST00000612223 IPO7O95373 1038 aaKnown RBP17.48■□□□□ 0.39
SYNRG-217ENST00000612223 DEKP35659 375 aaKnown RBP17.48■□□□□ 0.39
SYNRG-217ENST00000612223 HOOK1Q9UJC3 728 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms