RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-233ENST00000612121 BCANQ96GW7 911 aa24.41■■□□□ 1.5
LTBP4-233ENST00000612121 ANKRD30AQ9BXX3 1397 aa24.4■■□□□ 1.5
LTBP4-233ENST00000612121 CHIC2Q9UKJ5 165 aa24.39■■□□□ 1.49
LTBP4-233ENST00000612121 CHD2O14647 1828 aaKnown RBP24.39■■□□□ 1.49
LTBP4-233ENST00000612121 COL16A1Q07092 1604 aaPredicted RBP24.39■■□□□ 1.49
LTBP4-233ENST00000612121 LOC105371045A0A1W2PR82 267 aa24.38■■□□□ 1.49
LTBP4-233ENST00000612121 ZFYVE9O95405 1425 aa24.37■■□□□ 1.49
LTBP4-233ENST00000612121 PLEKHG1Q9ULL1 1385 aa24.37■■□□□ 1.49
LTBP4-233ENST00000612121 FGD6Q6ZV73 1430 aa24.35■■□□□ 1.49
LTBP4-233ENST00000612121 LRP6O75581 1613 aa24.35■■□□□ 1.49
LTBP4-233ENST00000612121 NCOA3Q9Y6Q9 1424 aa24.33■■□□□ 1.49
LTBP4-233ENST00000612121 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.48
LTBP4-233ENST00000612121 SPATA31A6Q5VVP1 1343 aa24.33■■□□□ 1.48
LTBP4-233ENST00000612121 RPRD2Q5VT52 1461 aaKnown RBP24.32■■□□□ 1.48
LTBP4-233ENST00000612121 RIMS2Q9UQ26 1411 aa24.32■■□□□ 1.48
LTBP4-233ENST00000612121 UPF1Q92900 1129 aaKnown RBP eCLIP24.31■■□□□ 1.48
LTBP4-233ENST00000612121 TBX22Q9Y458 520 aa24.31■■□□□ 1.48
LTBP4-233ENST00000612121 ZNF772Q68DY9 489 aaPredicted RBP24.3■■□□□ 1.48
LTBP4-233ENST00000612121 PPP1R15AO75807 674 aaPredicted RBP24.29■■□□□ 1.48
LTBP4-233ENST00000612121 HDGFP51858 240 aaKnown RBP24.29■■□□□ 1.48
LTBP4-233ENST00000612121 TMEM131LA2VDJ0 1609 aa24.28■■□□□ 1.48
LTBP4-233ENST00000612121 GCC2Q8IWJ2 1684 aa24.28■■□□□ 1.48
LTBP4-233ENST00000612121 ADGRL2O95490 1459 aa24.27■■□□□ 1.48
LTBP4-233ENST00000612121 MEX3CQ5U5Q3 659 aaKnown RBP24.27■■□□□ 1.48
LTBP4-233ENST00000612121 AHDC1Q5TGY3 1603 aaPredicted RBP24.27■■□□□ 1.48
LTBP4-233ENST00000612121 TRIM52Q96A61 297 aa24.26■■□□□ 1.47
LTBP4-233ENST00000612121 SHPRHQ149N8 1683 aa24.25■■□□□ 1.47
LTBP4-233ENST00000612121 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.25■■□□□ 1.47
LTBP4-233ENST00000612121 C14orf37Q86TY3 774 aa24.25■■□□□ 1.47
LTBP4-233ENST00000612121 CADPS2Q86UW7 1296 aa24.25■■□□□ 1.47
LTBP4-233ENST00000612121 ADAMTS13Q76LX8 1427 aa24.25■■□□□ 1.47
LTBP4-233ENST00000612121 APLP2Q06481 763 aa24.24■■□□□ 1.47
LTBP4-233ENST00000612121 C19orf44Q9H6X5 657 aa24.24■■□□□ 1.47
LTBP4-233ENST00000612121 ANKRD50Q9ULJ7 1429 aa24.22■■□□□ 1.47
LTBP4-233ENST00000612121 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.22■■□□□ 1.47
LTBP4-233ENST00000612121 ATF3P18847 181 aa24.21■■□□□ 1.47
LTBP4-233ENST00000612121 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
LTBP4-233ENST00000612121 RXRBP28702 533 aa24.19■■□□□ 1.46
LTBP4-233ENST00000612121 DIP2AQ14689 1571 aa24.19■■□□□ 1.46
LTBP4-233ENST00000612121 NUTM2DQ5VT03 806 aaPredicted RBP24.18■■□□□ 1.46
LTBP4-233ENST00000612121 CHGAP10645 457 aaKnown RBP24.17■■□□□ 1.46
LTBP4-233ENST00000612121 BRINP3Q76B58 766 aa24.17■■□□□ 1.46
LTBP4-233ENST00000612121 CDK12Q9NYV4 1490 aaPredicted RBP24.15■■□□□ 1.46
LTBP4-233ENST00000612121 AMOTL2Q9Y2J4 779 aa24.14■■□□□ 1.45
LTBP4-233ENST00000612121 PTPRUQ92729 1446 aa24.13■■□□□ 1.45
LTBP4-233ENST00000612121 NUTM2BA6NNL0 878 aaPredicted RBP24.13■■□□□ 1.45
LTBP4-233ENST00000612121 NUTM2EB1AL46 878 aaPredicted RBP24.13■■□□□ 1.45
LTBP4-233ENST00000612121 NUTM2AQ8IVF1 878 aaPredicted RBP24.13■■□□□ 1.45
LTBP4-233ENST00000612121 UNC13BO14795 1591 aa24.12■■□□□ 1.45
LTBP4-233ENST00000612121 E9PCH4 1651 aa24.11■■□□□ 1.45
LTBP4-233ENST00000612121 TRPM2O94759 1503 aa24.11■■□□□ 1.45
LTBP4-233ENST00000612121 FAM50AQ14320 339 aaKnown RBP24.11■■□□□ 1.45
LTBP4-233ENST00000612121 DCCP43146 1447 aa24.1■■□□□ 1.45
LTBP4-233ENST00000612121 SETD5Q9C0A6 1442 aa24.1■■□□□ 1.45
LTBP4-233ENST00000612121 AFF2P51816 1311 aa24.1■■□□□ 1.45
LTBP4-233ENST00000612121 ASXL1Q8IXJ9 1541 aa24.09■■□□□ 1.45
LTBP4-233ENST00000612121 SRCAPQ6ZRS2 3230 aa24.06■■□□□ 1.44
LTBP4-233ENST00000612121 MST1RQ04912 1400 aa24.05■■□□□ 1.44
LTBP4-233ENST00000612121 NHSL1Q5SYE7 1610 aa24.05■■□□□ 1.44
LTBP4-233ENST00000612121 XRN1Q8IZH2 1706 aaKnown RBP24.04■■□□□ 1.44
LTBP4-233ENST00000612121 LRRC59Q96AG4 307 aaKnown RBP24.03■■□□□ 1.44
LTBP4-233ENST00000612121 IQGAP3Q86VI3 1631 aa24.02■■□□□ 1.44
LTBP4-233ENST00000612121 NRXN3Q9Y4C0 1643 aa24.02■■□□□ 1.44
LTBP4-233ENST00000612121 RGS12O14924 1447 aa24.01■■□□□ 1.43
LTBP4-233ENST00000612121 QTRT2Q9H974 415 aaKnown RBP24.01■■□□□ 1.43
LTBP4-233ENST00000612121 RBM6P78332 1123 aaKnown RBP24■■□□□ 1.43
LTBP4-233ENST00000612121 C8orf37Q96NL8 207 aa24■■□□□ 1.43
LTBP4-233ENST00000612121 SETBP1Q9Y6X0 1596 aa23.99■■□□□ 1.43
LTBP4-233ENST00000612121 DDX17Q92841 729 aaKnown RBP23.98■■□□□ 1.43
LTBP4-233ENST00000612121 PNPLA6Q8IY17 1366 aa23.98■■□□□ 1.43
LTBP4-233ENST00000612121 METP08581 1390 aa23.96■■□□□ 1.43
LTBP4-233ENST00000612121 ROCK1Q13464 1354 aa23.96■■□□□ 1.43
LTBP4-233ENST00000612121 NUP155O75694 1391 aa23.95■■□□□ 1.42
LTBP4-233ENST00000612121 ADGRL3Q9HAR2 1447 aa23.94■■□□□ 1.42
LTBP4-233ENST00000612121 NGLY1Q96IV0 654 aa23.9■■□□□ 1.42
LTBP4-233ENST00000612121 NALCNQ8IZF0 1738 aa23.9■■□□□ 1.42
LTBP4-233ENST00000612121 ADAMTS2O95450 1211 aa23.89■■□□□ 1.41
LTBP4-233ENST00000612121 ZNF326Q5BKZ1 582 aaKnown RBP23.88■■□□□ 1.41
LTBP4-233ENST00000612121 SPHKAPQ2M3C7 1700 aa23.87■■□□□ 1.41
LTBP4-233ENST00000612121 C1orf167Q5SNV9 1468 aa23.87■■□□□ 1.41
LTBP4-233ENST00000612121 LAMC1P11047 1609 aa23.86■■□□□ 1.41
LTBP4-233ENST00000612121 ATAD2Q6PL18 1390 aa23.85■■□□□ 1.41
LTBP4-233ENST00000612121 SOS2Q07890 1332 aaPredicted RBP23.84■■□□□ 1.41
LTBP4-233ENST00000612121 USP21Q9UK80 565 aa23.82■■□□□ 1.4
LTBP4-233ENST00000612121 NEXMIFQ5QGS0 1516 aa23.82■■□□□ 1.4
LTBP4-233ENST00000612121 FNBP4Q8N3X1 1017 aaPredicted RBP23.81■■□□□ 1.4
LTBP4-233ENST00000612121 TRPC5Q9UL62 973 aaPredicted RBP23.81■■□□□ 1.4
LTBP4-233ENST00000612121 EP400Q96L91 3159 aa23.81■■□□□ 1.4
LTBP4-233ENST00000612121 ORAI2Q96SN7 254 aa23.8■■□□□ 1.4
LTBP4-233ENST00000612121 PTCH1Q13635 1447 aa23.78■■□□□ 1.4
LTBP4-233ENST00000612121 ATRNO75882 1429 aa23.77■■□□□ 1.4
LTBP4-233ENST00000612121 CLTCL1P53675 1640 aa23.77■■□□□ 1.4
LTBP4-233ENST00000612121 ROBO2Q9HCK4 1378 aa23.76■■□□□ 1.39
LTBP4-233ENST00000612121 ITGAEP38570 1179 aa23.75■■□□□ 1.39
LTBP4-233ENST00000612121 ZRANB1Q9UGI0 708 aa23.75■■□□□ 1.39
LTBP4-233ENST00000612121 COL22A1Q8NFW1 1626 aaPredicted RBP23.74■■□□□ 1.39
LTBP4-233ENST00000612121 FOXD1Q16676 465 aa23.73■■□□□ 1.39
LTBP4-233ENST00000612121 PRAG1Q86YV5 1406 aa23.71■■□□□ 1.39
LTBP4-233ENST00000612121 MYOM2P54296 1465 aa23.7■■□□□ 1.38
LTBP4-233ENST00000612121 KIF1BO60333 1816 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms