RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 LTKP29376 864 aa18.38■□□□□ 0.53
CBWD3-208ENST00000612050 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
CBWD3-208ENST00000612050 TMEM131LA2VDJ0 1609 aa18.37■□□□□ 0.53
CBWD3-208ENST00000612050 MYO5BQ9ULV0 1848 aa18.37■□□□□ 0.53
CBWD3-208ENST00000612050 RIMS2Q9UQ26 1411 aa18.34■□□□□ 0.53
CBWD3-208ENST00000612050 ZNF326Q5BKZ1 582 aaKnown RBP18.33■□□□□ 0.53
CBWD3-208ENST00000612050 UBAP1LF5GYI3 381 aa18.32■□□□□ 0.52
CBWD3-208ENST00000612050 TRPM2O94759 1503 aa18.32■□□□□ 0.52
CBWD3-208ENST00000612050 TOM1O60784 492 aa18.32■□□□□ 0.52
CBWD3-208ENST00000612050 KIF1BO60333 1816 aa18.32■□□□□ 0.52
CBWD3-208ENST00000612050 PLEKHG1Q9ULL1 1385 aa18.3■□□□□ 0.52
CBWD3-208ENST00000612050 SETD5Q9C0A6 1442 aa18.3■□□□□ 0.52
CBWD3-208ENST00000612050 ZFYVE9O95405 1425 aa18.29■□□□□ 0.52
CBWD3-208ENST00000612050 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
CBWD3-208ENST00000612050 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
CBWD3-208ENST00000612050 CLTCL1P53675 1640 aa18.26■□□□□ 0.51
CBWD3-208ENST00000612050 KCNA6P17658 529 aa18.25■□□□□ 0.51
CBWD3-208ENST00000612050 DIP2AQ14689 1571 aa18.25■□□□□ 0.51
CBWD3-208ENST00000612050 MPHOSPH9Q99550 1183 aa18.24■□□□□ 0.51
CBWD3-208ENST00000612050 LRRC7Q96NW7 1537 aa18.24■□□□□ 0.51
CBWD3-208ENST00000612050 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
CBWD3-208ENST00000612050 STRCP1A6NGW2 1772 aa18.23■□□□□ 0.51
CBWD3-208ENST00000612050 CCDC144AA2RUR9 1427 aa18.23■□□□□ 0.51
CBWD3-208ENST00000612050 TBX22Q9Y458 520 aa18.23■□□□□ 0.51
CBWD3-208ENST00000612050 NKTRP30414 1462 aaKnown RBP18.21■□□□□ 0.51
CBWD3-208ENST00000612050 PROSER2Q86WR7 435 aaPredicted RBP18.21■□□□□ 0.51
CBWD3-208ENST00000612050 RAB3GAP2Q9H2M9 1393 aa18.2■□□□□ 0.5
CBWD3-208ENST00000612050 PIP4K2BP78356 416 aa18.2■□□□□ 0.5
CBWD3-208ENST00000612050 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
CBWD3-208ENST00000612050 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
CBWD3-208ENST00000612050 RPGRIP1LQ68CZ1 1315 aa18.18■□□□□ 0.5
CBWD3-208ENST00000612050 NWD1Q149M9 1564 aa18.18■□□□□ 0.5
CBWD3-208ENST00000612050 CHD2O14647 1828 aaKnown RBP18.17■□□□□ 0.5
CBWD3-208ENST00000612050 NEXMIFQ5QGS0 1516 aa18.16■□□□□ 0.5
CBWD3-208ENST00000612050 C14orf37Q86TY3 774 aa18.15■□□□□ 0.5
CBWD3-208ENST00000612050 TMEM94Q12767 1356 aa18.15■□□□□ 0.5
CBWD3-208ENST00000612050 HRCP23327 699 aa18.15■□□□□ 0.5
CBWD3-208ENST00000612050 MSH6P52701 1360 aa18.14■□□□□ 0.5
CBWD3-208ENST00000612050 SETBP1Q9Y6X0 1596 aa18.14■□□□□ 0.5
CBWD3-208ENST00000612050 ADAMTS13Q76LX8 1427 aa18.13■□□□□ 0.49
CBWD3-208ENST00000612050 XIRP1Q702N8 1843 aaKnown RBP18.12■□□□□ 0.49
CBWD3-208ENST00000612050 RGL3Q3MIN7 710 aa18.1■□□□□ 0.49
CBWD3-208ENST00000612050 AMOTL2Q9Y2J4 779 aa18.1■□□□□ 0.49
CBWD3-208ENST00000612050 NCOA3Q9Y6Q9 1424 aa18.1■□□□□ 0.49
CBWD3-208ENST00000612050 PPLO60437 1756 aa18.1■□□□□ 0.49
CBWD3-208ENST00000612050 ANKRD30BQ9BXX2 1392 aa18.09■□□□□ 0.49
CBWD3-208ENST00000612050 NRXN3Q9Y4C0 1643 aa18.08■□□□□ 0.48
CBWD3-208ENST00000612050 RBM33Q96EV2 1170 aaKnown RBP18.06■□□□□ 0.48
CBWD3-208ENST00000612050 ATF3P18847 181 aa18.05■□□□□ 0.48
CBWD3-208ENST00000612050 HSPA1LP34931 641 aa18.04■□□□□ 0.48
CBWD3-208ENST00000612050 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
CBWD3-208ENST00000612050 C19orf44Q9H6X5 657 aa18.03■□□□□ 0.48
CBWD3-208ENST00000612050 SPATA31E1Q6ZUB1 1445 aa18.03■□□□□ 0.48
CBWD3-208ENST00000612050 XRN1Q8IZH2 1706 aaKnown RBP18.02■□□□□ 0.48
CBWD3-208ENST00000612050 ALKQ9UM73 1620 aa18.02■□□□□ 0.48
CBWD3-208ENST00000612050 METP08581 1390 aa18.02■□□□□ 0.48
CBWD3-208ENST00000612050 IFT172Q9UG01 1749 aa18.01■□□□□ 0.47
CBWD3-208ENST00000612050 FAM135BQ49AJ0 1406 aa18■□□□□ 0.47
CBWD3-208ENST00000612050 PTPRUQ92729 1446 aa18■□□□□ 0.47
CBWD3-208ENST00000612050 SLAIN2Q9P270 581 aa17.99■□□□□ 0.47
CBWD3-208ENST00000612050 PIAS4Q8N2W9 510 aaPredicted RBP17.98■□□□□ 0.47
CBWD3-208ENST00000612050 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.98■□□□□ 0.47
CBWD3-208ENST00000612050 DISP3Q9P2K9 1392 aa17.98■□□□□ 0.47
CBWD3-208ENST00000612050 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
CBWD3-208ENST00000612050 DCCP43146 1447 aa17.97■□□□□ 0.47
CBWD3-208ENST00000612050 ADGRF5Q8IZF2 1346 aa17.97■□□□□ 0.47
CBWD3-208ENST00000612050 SETD1AO15047 1707 aaKnown RBP17.96■□□□□ 0.47
CBWD3-208ENST00000612050 LAMC1P11047 1609 aa17.96■□□□□ 0.47
CBWD3-208ENST00000612050 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
CBWD3-208ENST00000612050 PTCH1Q13635 1447 aa17.96■□□□□ 0.47
CBWD3-208ENST00000612050 MYOM2P54296 1465 aa17.95■□□□□ 0.46
CBWD3-208ENST00000612050 PIK3C2GO75747 1445 aa17.93■□□□□ 0.46
CBWD3-208ENST00000612050 ADGRL3Q9HAR2 1447 aa17.93■□□□□ 0.46
CBWD3-208ENST00000612050 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
CBWD3-208ENST00000612050 DHX57Q6P158 1386 aaKnown RBP17.9■□□□□ 0.46
CBWD3-208ENST00000612050 DCAF11Q8TEB1 546 aa17.9■□□□□ 0.46
CBWD3-208ENST00000612050 STK26Q9P289 416 aa17.9■□□□□ 0.46
CBWD3-208ENST00000612050 PHLPP1O60346 1717 aa17.9■□□□□ 0.46
CBWD3-208ENST00000612050 TRIM26Q12899 539 aaPredicted RBP17.89■□□□□ 0.46
CBWD3-208ENST00000612050 NALCNQ8IZF0 1738 aa17.89■□□□□ 0.45
CBWD3-208ENST00000612050 LRPPRCP42704 1394 aaKnown RBP17.89■□□□□ 0.45
CBWD3-208ENST00000612050 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.45
CBWD3-208ENST00000612050 ROBO2Q9HCK4 1378 aa17.88■□□□□ 0.45
CBWD3-208ENST00000612050 C14orf93Q9H972 538 aaKnown RBP17.88■□□□□ 0.45
CBWD3-208ENST00000612050 KNDC1Q76NI1 1749 aa17.88■□□□□ 0.45
CBWD3-208ENST00000612050 NRXN1Q9ULB1 1477 aa17.87■□□□□ 0.45
CBWD3-208ENST00000612050 ABCC11Q96J66 1382 aa17.86■□□□□ 0.45
CBWD3-208ENST00000612050 MED1Q15648 1581 aaPredicted RBP17.86■□□□□ 0.45
CBWD3-208ENST00000612050 YTHDC2Q9H6S0 1430 aaKnown RBP17.86■□□□□ 0.45
CBWD3-208ENST00000612050 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
CBWD3-208ENST00000612050 TECPR2O15040 1411 aa17.84■□□□□ 0.45
CBWD3-208ENST00000612050 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
CBWD3-208ENST00000612050 MST1RQ04912 1400 aa17.84■□□□□ 0.45
CBWD3-208ENST00000612050 BRINP3Q76B58 766 aa17.82■□□□□ 0.44
CBWD3-208ENST00000612050 JCADQ9P266 1359 aa17.82■□□□□ 0.44
CBWD3-208ENST00000612050 AHDC1Q5TGY3 1603 aaPredicted RBP17.82■□□□□ 0.44
CBWD3-208ENST00000612050 SIRT1Q96EB6 747 aa17.81■□□□□ 0.44
CBWD3-208ENST00000612050 POGKQ9P215 609 aa17.81■□□□□ 0.44
CBWD3-208ENST00000612050 ASXL1Q8IXJ9 1541 aa17.81■□□□□ 0.44
CBWD3-208ENST00000612050 CDC42BPGQ6DT37 1551 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms