RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 LMTK3Q96Q04 1460 aa17.37■□□□□ 0.37
CLK4-215ENST00000611733 PPP1R15AO75807 674 aaPredicted RBP17.36■□□□□ 0.37
CLK4-215ENST00000611733 RPGRIP1LQ68CZ1 1315 aa17.36■□□□□ 0.37
CLK4-215ENST00000611733 ZNF142P52746 1687 aaPredicted RBP17.36■□□□□ 0.37
CLK4-215ENST00000611733 NEXMIFQ5QGS0 1516 aa17.36■□□□□ 0.37
CLK4-215ENST00000611733 NBPF8Q3BBV2 869 aa17.36■□□□□ 0.37
CLK4-215ENST00000611733 TIMELESSQ9UNS1 1208 aa17.36■□□□□ 0.37
CLK4-215ENST00000611733 ZFYVE9O95405 1425 aa17.36■□□□□ 0.37
CLK4-215ENST00000611733 TXNDC2Q86VQ3 553 aa17.35■□□□□ 0.37
CLK4-215ENST00000611733 KDM5AP29375 1690 aaKnown RBP17.34■□□□□ 0.37
CLK4-215ENST00000611733 ARHGAP23Q9P227 1491 aa17.33■□□□□ 0.37
CLK4-215ENST00000611733 NCKAP5LQ9HCH0 1330 aa17.32■□□□□ 0.36
CLK4-215ENST00000611733 VGFO15240 615 aaPredicted RBP17.32■□□□□ 0.36
CLK4-215ENST00000611733 SLIT1O75093 1534 aa17.32■□□□□ 0.36
CLK4-215ENST00000611733 PPLO60437 1756 aa17.31■□□□□ 0.36
CLK4-215ENST00000611733 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
CLK4-215ENST00000611733 IFT172Q9UG01 1749 aa17.31■□□□□ 0.36
CLK4-215ENST00000611733 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
CLK4-215ENST00000611733 ANKLE2Q86XL3 938 aa17.3■□□□□ 0.36
CLK4-215ENST00000611733 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLK4-215ENST00000611733 HDGFP51858 240 aaKnown RBP17.29■□□□□ 0.36
CLK4-215ENST00000611733 CFAP70Q5T0N1 1121 aa17.28■□□□□ 0.36
CLK4-215ENST00000611733 PRAG1Q86YV5 1406 aa17.28■□□□□ 0.36
CLK4-215ENST00000611733 ZEB1P37275 1124 aaPredicted RBP17.28■□□□□ 0.36
CLK4-215ENST00000611733 MYOM2P54296 1465 aa17.27■□□□□ 0.36
CLK4-215ENST00000611733 BCANQ96GW7 911 aa17.27■□□□□ 0.36
CLK4-215ENST00000611733 SCAF11Q99590 1463 aaKnown RBP17.26■□□□□ 0.35
CLK4-215ENST00000611733 NRXN1Q9ULB1 1477 aa17.26■□□□□ 0.35
CLK4-215ENST00000611733 NBPF1Q3BBV0 1214 aa17.26■□□□□ 0.35
CLK4-215ENST00000611733 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
CLK4-215ENST00000611733 SLC26A8Q96RN1 970 aa17.25■□□□□ 0.35
CLK4-215ENST00000611733 PIK3C2GO75747 1445 aa17.25■□□□□ 0.35
CLK4-215ENST00000611733 PLEKHG1Q9ULL1 1385 aa17.24■□□□□ 0.35
CLK4-215ENST00000611733 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
CLK4-215ENST00000611733 C14orf93Q9H972 538 aaKnown RBP17.23■□□□□ 0.35
CLK4-215ENST00000611733 ADAMTS13Q76LX8 1427 aa17.21■□□□□ 0.35
CLK4-215ENST00000611733 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
CLK4-215ENST00000611733 NPHP4O75161 1426 aaPredicted RBP17.2■□□□□ 0.34
CLK4-215ENST00000611733 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
CLK4-215ENST00000611733 STRCQ7RTU9 1775 aa17.19■□□□□ 0.34
CLK4-215ENST00000611733 MED14O60244 1454 aa17.19■□□□□ 0.34
CLK4-215ENST00000611733 METP08581 1390 aa17.19■□□□□ 0.34
CLK4-215ENST00000611733 IQGAP1P46940 1657 aa17.18■□□□□ 0.34
CLK4-215ENST00000611733 SETBP1Q9Y6X0 1596 aa17.18■□□□□ 0.34
CLK4-215ENST00000611733 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
CLK4-215ENST00000611733 POLR1AO95602 1720 aaPredicted RBP17.17■□□□□ 0.34
CLK4-215ENST00000611733 TRPM1Q7Z4N2 1603 aa17.17■□□□□ 0.34
CLK4-215ENST00000611733 ROCK2O75116 1388 aaKnown RBP17.16■□□□□ 0.34
CLK4-215ENST00000611733 RALGAPBQ86X10 1494 aa17.15■□□□□ 0.34
CLK4-215ENST00000611733 ASXL1Q8IXJ9 1541 aa17.15■□□□□ 0.34
CLK4-215ENST00000611733 CARD11Q9BXL7 1154 aa17.15■□□□□ 0.34
CLK4-215ENST00000611733 STK26Q9P289 416 aa17.15■□□□□ 0.34
CLK4-215ENST00000611733 SETD1AO15047 1707 aaKnown RBP17.13■□□□□ 0.33
CLK4-215ENST00000611733 ADGRB1O14514 1584 aa17.13■□□□□ 0.33
CLK4-215ENST00000611733 PTPRUQ92729 1446 aa17.13■□□□□ 0.33
CLK4-215ENST00000611733 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
CLK4-215ENST00000611733 GPRASP1Q5JY77 1395 aa17.12■□□□□ 0.33
CLK4-215ENST00000611733 KIAA1210Q9ULL0 1709 aa17.11■□□□□ 0.33
CLK4-215ENST00000611733 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
CLK4-215ENST00000611733 AMOTL2Q9Y2J4 779 aa17.1■□□□□ 0.33
CLK4-215ENST00000611733 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
CLK4-215ENST00000611733 LAMC1P11047 1609 aa17.08■□□□□ 0.33
CLK4-215ENST00000611733 KCNA6P17658 529 aa17.07■□□□□ 0.32
CLK4-215ENST00000611733 LRPPRCP42704 1394 aaKnown RBP17.07■□□□□ 0.32
CLK4-215ENST00000611733 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
CLK4-215ENST00000611733 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
CLK4-215ENST00000611733 WAPLQ7Z5K2 1190 aa17.06■□□□□ 0.32
CLK4-215ENST00000611733 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
CLK4-215ENST00000611733 RBM33Q96EV2 1170 aaKnown RBP17.05■□□□□ 0.32
CLK4-215ENST00000611733 ZNF335Q9H4Z2 1342 aaPredicted RBP17.05■□□□□ 0.32
CLK4-215ENST00000611733 ABCC11Q96J66 1382 aa17.05■□□□□ 0.32
CLK4-215ENST00000611733 USP47Q96K76 1375 aa17.05■□□□□ 0.32
CLK4-215ENST00000611733 ST20-MTHFSA0A0A6YYL1 179 aa17.04■□□□□ 0.32
CLK4-215ENST00000611733 SAFB2Q14151 953 aaKnown RBP eCLIP17.04■□□□□ 0.32
CLK4-215ENST00000611733 ROBO2Q9HCK4 1378 aa17.04■□□□□ 0.32
CLK4-215ENST00000611733 PIK3R4Q99570 1358 aa17.04■□□□□ 0.32
CLK4-215ENST00000611733 PLEKHH1Q9ULM0 1364 aa17.04■□□□□ 0.32
CLK4-215ENST00000611733 EIF4G2P78344 907 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLK4-215ENST00000611733 PRAM1Q96QH2 718 aa17.03■□□□□ 0.32
CLK4-215ENST00000611733 CHD2O14647 1828 aaKnown RBP17.01■□□□□ 0.31
CLK4-215ENST00000611733 STRCP1A6NGW2 1772 aa17■□□□□ 0.31
CLK4-215ENST00000611733 POGKQ9P215 609 aa16.99■□□□□ 0.31
CLK4-215ENST00000611733 TECPR2O15040 1411 aa16.99■□□□□ 0.31
CLK4-215ENST00000611733 XRN1Q8IZH2 1706 aaKnown RBP16.99■□□□□ 0.31
CLK4-215ENST00000611733 CENPJQ9HC77 1338 aaPredicted RBP16.98■□□□□ 0.31
CLK4-215ENST00000611733 PROSER2Q86WR7 435 aaPredicted RBP16.98■□□□□ 0.31
CLK4-215ENST00000611733 SIRT1Q96EB6 747 aa16.98■□□□□ 0.31
CLK4-215ENST00000611733 TESK2Q96S53 571 aa16.98■□□□□ 0.31
CLK4-215ENST00000611733 ARHGEF28Q8N1W1 1705 aaKnown RBP16.97■□□□□ 0.31
CLK4-215ENST00000611733 DLC1Q96QB1 1528 aa16.96■□□□□ 0.31
CLK4-215ENST00000611733 MINK1Q8N4C8 1332 aaPredicted RBP16.96■□□□□ 0.31
CLK4-215ENST00000611733 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
CLK4-215ENST00000611733 CPS1P31327 1500 aa16.96■□□□□ 0.31
CLK4-215ENST00000611733 C11orf95C9JLR9 678 aaPredicted RBP16.95■□□□□ 0.3
CLK4-215ENST00000611733 FAM135BQ49AJ0 1406 aa16.95■□□□□ 0.3
CLK4-215ENST00000611733 EIF3AQ14152 1382 aaKnown RBP16.95■□□□□ 0.3
CLK4-215ENST00000611733 PTCH1Q13635 1447 aa16.95■□□□□ 0.3
CLK4-215ENST00000611733 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
CLK4-215ENST00000611733 TMEM94Q12767 1356 aa16.92■□□□□ 0.3
CLK4-215ENST00000611733 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms