RNA–Protein interactions for RNA: ENST00000611255.4

LRMDA-215, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRMDA, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-215ENST00000611255 NWD1Q149M9 1564 aa35.02■■■■□ 3.2
LRMDA-215ENST00000611255 NKTRP30414 1462 aaKnown RBP35■■■■□ 3.19
LRMDA-215ENST00000611255 ROBO1Q9Y6N7 1651 aa34.98■■■■□ 3.19
LRMDA-215ENST00000611255 ZFYVE9O95405 1425 aa34.98■■■■□ 3.19
LRMDA-215ENST00000611255 BCANQ96GW7 911 aa34.98■■■■□ 3.19
LRMDA-215ENST00000611255 MYO5BQ9ULV0 1848 aa34.95■■■■□ 3.19
LRMDA-215ENST00000611255 PLEKHG1Q9ULL1 1385 aa34.94■■■■□ 3.18
LRMDA-215ENST00000611255 RIMS2Q9UQ26 1411 aa34.92■■■■□ 3.18
LRMDA-215ENST00000611255 TMEM131LA2VDJ0 1609 aa34.91■■■■□ 3.18
LRMDA-215ENST00000611255 MSH6P52701 1360 aa34.9■■■■□ 3.18
LRMDA-215ENST00000611255 GCC2Q8IWJ2 1684 aa34.9■■■■□ 3.18
LRMDA-215ENST00000611255 CHD2O14647 1828 aaKnown RBP34.9■■■■□ 3.18
LRMDA-215ENST00000611255 HDGFP51858 240 aaKnown RBP34.89■■■■□ 3.18
LRMDA-215ENST00000611255 SLAIN2Q9P270 581 aa34.88■■■■□ 3.17
LRMDA-215ENST00000611255 PPP1R15AO75807 674 aaPredicted RBP34.87■■■■□ 3.17
LRMDA-215ENST00000611255 POTEAQ6S8J7 498 aa34.86■■■■□ 3.17
LRMDA-215ENST00000611255 UNC13BO14795 1591 aa34.86■■■■□ 3.17
LRMDA-215ENST00000611255 TBX22Q9Y458 520 aa34.85■■■■□ 3.17
LRMDA-215ENST00000611255 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.81■■■■□ 3.16
LRMDA-215ENST00000611255 E9PCH4 1651 aa34.8■■■■□ 3.16
LRMDA-215ENST00000611255 CHGAP10645 457 aaKnown RBP34.8■■■■□ 3.16
LRMDA-215ENST00000611255 NUTM2DQ5VT03 806 aaPredicted RBP34.77■■■■□ 3.16
LRMDA-215ENST00000611255 ADAMTS13Q76LX8 1427 aa34.77■■■■□ 3.16
LRMDA-215ENST00000611255 PHLPP1O60346 1717 aa34.77■■■■□ 3.16
LRMDA-215ENST00000611255 ROCK1Q13464 1354 aa34.76■■■■□ 3.16
LRMDA-215ENST00000611255 NCOA3Q9Y6Q9 1424 aa34.76■■■■□ 3.16
LRMDA-215ENST00000611255 JCADQ9P266 1359 aa34.74■■■■□ 3.15
LRMDA-215ENST00000611255 IQGAP3Q86VI3 1631 aa34.73■■■■□ 3.15
LRMDA-215ENST00000611255 PIK3R4Q99570 1358 aa34.69■■■■□ 3.14
LRMDA-215ENST00000611255 COL16A1Q07092 1604 aaPredicted RBP34.68■■■■□ 3.14
LRMDA-215ENST00000611255 DIP2AQ14689 1571 aa34.68■■■■□ 3.14
LRMDA-215ENST00000611255 NUP155O75694 1391 aa34.67■■■■□ 3.14
LRMDA-215ENST00000611255 C14orf37Q86TY3 774 aa34.67■■■■□ 3.14
LRMDA-215ENST00000611255 C19orf44Q9H6X5 657 aa34.65■■■■□ 3.14
LRMDA-215ENST00000611255 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.64■■■■□ 3.14
LRMDA-215ENST00000611255 CADPS2Q86UW7 1296 aa34.63■■■■□ 3.13
LRMDA-215ENST00000611255 PTPRUQ92729 1446 aa34.61■■■■□ 3.13
LRMDA-215ENST00000611255 ATF3P18847 181 aa34.6■■■■□ 3.13
LRMDA-215ENST00000611255 AMOTL2Q9Y2J4 779 aa34.6■■■■□ 3.13
LRMDA-215ENST00000611255 TRPM2O94759 1503 aa34.59■■■■□ 3.13
LRMDA-215ENST00000611255 ITGAEP38570 1179 aa34.58■■■■□ 3.13
LRMDA-215ENST00000611255 AHDC1Q5TGY3 1603 aaPredicted RBP34.56■■■■□ 3.12
LRMDA-215ENST00000611255 SPATA31A6Q5VVP1 1343 aa34.55■■■■□ 3.12
LRMDA-215ENST00000611255 LRP6O75581 1613 aa34.55■■■■□ 3.12
LRMDA-215ENST00000611255 SETD1AO15047 1707 aaKnown RBP34.51■■■■□ 3.12
LRMDA-215ENST00000611255 BRINP3Q76B58 766 aa34.5■■■■□ 3.11
LRMDA-215ENST00000611255 NRXN3Q9Y4C0 1643 aa34.5■■■■□ 3.11
LRMDA-215ENST00000611255 SHPRHQ149N8 1683 aa34.47■■■■□ 3.11
LRMDA-215ENST00000611255 SETBP1Q9Y6X0 1596 aa34.47■■■■□ 3.11
LRMDA-215ENST00000611255 SPHKAPQ2M3C7 1700 aa34.47■■■■□ 3.11
LRMDA-215ENST00000611255 MEX3CQ5U5Q3 659 aaKnown RBP34.46■■■■□ 3.11
LRMDA-215ENST00000611255 PPARGC1BQ86YN6 1023 aaKnown RBP34.46■■■■□ 3.11
LRMDA-215ENST00000611255 XRN1Q8IZH2 1706 aaKnown RBP34.46■■■■□ 3.11
LRMDA-215ENST00000611255 DCCP43146 1447 aa34.45■■■■□ 3.11
LRMDA-215ENST00000611255 ZNF326Q5BKZ1 582 aaKnown RBP34.43■■■■□ 3.1
LRMDA-215ENST00000611255 ZNF772Q68DY9 489 aaPredicted RBP34.43■■■■□ 3.1
LRMDA-215ENST00000611255 METP08581 1390 aa34.41■■■■□ 3.1
LRMDA-215ENST00000611255 MST1RQ04912 1400 aa34.38■■■■□ 3.09
LRMDA-215ENST00000611255 ASXL1Q8IXJ9 1541 aa34.37■■■■□ 3.09
LRMDA-215ENST00000611255 NUTM2BA6NNL0 878 aaPredicted RBP34.34■■■■□ 3.09
LRMDA-215ENST00000611255 NUTM2EB1AL46 878 aaPredicted RBP34.34■■■■□ 3.09
LRMDA-215ENST00000611255 NUTM2AQ8IVF1 878 aaPredicted RBP34.34■■■■□ 3.09
LRMDA-215ENST00000611255 SETD5Q9C0A6 1442 aa34.34■■■■□ 3.09
LRMDA-215ENST00000611255 CLTCL1P53675 1640 aa34.33■■■■□ 3.09
LRMDA-215ENST00000611255 NEXMIFQ5QGS0 1516 aa34.32■■■■□ 3.08
LRMDA-215ENST00000611255 TRIM52Q96A61 297 aa34.32■■■■□ 3.08
LRMDA-215ENST00000611255 NHSL1Q5SYE7 1610 aa34.3■■■■□ 3.08
LRMDA-215ENST00000611255 ADGRL3Q9HAR2 1447 aa34.3■■■■□ 3.08
LRMDA-215ENST00000611255 UPF1Q92900 1129 aaKnown RBP eCLIP34.29■■■■□ 3.08
LRMDA-215ENST00000611255 RXRBP28702 533 aa34.27■■■■□ 3.08
LRMDA-215ENST00000611255 LRRC59Q96AG4 307 aaKnown RBP34.27■■■■□ 3.08
LRMDA-215ENST00000611255 DDX17Q92841 729 aaKnown RBP34.25■■■■□ 3.07
LRMDA-215ENST00000611255 NAIPQ13075 1403 aa34.23■■■■□ 3.07
LRMDA-215ENST00000611255 NALCNQ8IZF0 1738 aa34.23■■■■□ 3.07
LRMDA-215ENST00000611255 AFF2P51816 1311 aa34.23■■■■□ 3.07
LRMDA-215ENST00000611255 KIF1BO60333 1816 aa34.22■■■■□ 3.07
LRMDA-215ENST00000611255 RRBP1Q9P2E9 1410 aaKnown RBP34.21■■■■□ 3.07
LRMDA-215ENST00000611255 PNPLA6Q8IY17 1366 aa34.19■■■■□ 3.06
LRMDA-215ENST00000611255 CDK12Q9NYV4 1490 aaPredicted RBP34.18■■■■□ 3.06
LRMDA-215ENST00000611255 C1orf167Q5SNV9 1468 aa34.15■■■■□ 3.06
LRMDA-215ENST00000611255 VGFO15240 615 aaPredicted RBP34.15■■■■□ 3.06
LRMDA-215ENST00000611255 PTCH1Q13635 1447 aa34.13■■■■□ 3.05
LRMDA-215ENST00000611255 ROBO2Q9HCK4 1378 aa34.13■■■■□ 3.05
LRMDA-215ENST00000611255 C8orf37Q96NL8 207 aa34.12■■■■□ 3.05
LRMDA-215ENST00000611255 QTRT2Q9H974 415 aaKnown RBP34.1■■■■□ 3.05
LRMDA-215ENST00000611255 LAMC1P11047 1609 aa34.08■■■■□ 3.05
LRMDA-215ENST00000611255 RPGRIP1LQ68CZ1 1315 aa34.08■■■■□ 3.05
LRMDA-215ENST00000611255 ORAI2Q96SN7 254 aa34.08■■■■□ 3.05
LRMDA-215ENST00000611255 PRAG1Q86YV5 1406 aa34.06■■■■□ 3.04
LRMDA-215ENST00000611255 SOS2Q07890 1332 aaPredicted RBP34.05■■■■□ 3.04
LRMDA-215ENST00000611255 RBM6P78332 1123 aaKnown RBP34.05■■■■□ 3.04
LRMDA-215ENST00000611255 HFM1A2PYH4 1435 aa34.04■■■■□ 3.04
LRMDA-215ENST00000611255 SLC4A1APQ9BWU0 796 aaKnown RBP34.03■■■■□ 3.04
LRMDA-215ENST00000611255 RGS12O14924 1447 aa34.03■■■■□ 3.04
LRMDA-215ENST00000611255 ADAMTS2O95450 1211 aa34.02■■■■□ 3.04
LRMDA-215ENST00000611255 NGLY1Q96IV0 654 aa34.01■■■■□ 3.03
LRMDA-215ENST00000611255 PPLO60437 1756 aa34■■■■□ 3.03
LRMDA-215ENST00000611255 FOXD1Q16676 465 aa33.92■■■■□ 3.02
LRMDA-215ENST00000611255 USP21Q9UK80 565 aa33.9■■■■□ 3.02
LRMDA-215ENST00000611255 FNBP4Q8N3X1 1017 aaPredicted RBP33.89■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms