RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
NEK3-205ENST00000610828 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
NEK3-205ENST00000610828 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
NEK3-205ENST00000610828 DIP2CQ9Y2E4 1556 aa18.46■□□□□ 0.55
NEK3-205ENST00000610828 CFAP70Q5T0N1 1121 aa18.46■□□□□ 0.55
NEK3-205ENST00000610828 RICTORQ6R327 1708 aa18.46■□□□□ 0.54
NEK3-205ENST00000610828 ABCC3O15438 1527 aa18.45■□□□□ 0.54
NEK3-205ENST00000610828 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
NEK3-205ENST00000610828 CC2D1BQ5T0F9 858 aaKnown RBP18.44■□□□□ 0.54
NEK3-205ENST00000610828 IFT172Q9UG01 1749 aa18.44■□□□□ 0.54
NEK3-205ENST00000610828 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
NEK3-205ENST00000610828 ADGRB3O60242 1522 aa18.43■□□□□ 0.54
NEK3-205ENST00000610828 GLI2P10070 1586 aa18.42■□□□□ 0.54
NEK3-205ENST00000610828 CDCA8Q53HL2 280 aa18.42■□□□□ 0.54
NEK3-205ENST00000610828 IRX6P78412 446 aaPredicted RBP18.41■□□□□ 0.54
NEK3-205ENST00000610828 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
NEK3-205ENST00000610828 NOS1P29475 1434 aa18.41■□□□□ 0.54
NEK3-205ENST00000610828 FAM69CQ0P6D2 419 aa18.41■□□□□ 0.54
NEK3-205ENST00000610828 YEATS2Q9ULM3 1422 aa18.41■□□□□ 0.54
NEK3-205ENST00000610828 SENP3-EIF4A1A0A087X0R7 540 aa18.4■□□□□ 0.54
NEK3-205ENST00000610828 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
NEK3-205ENST00000610828 NRXN1Q9ULB1 1477 aa18.39■□□□□ 0.53
NEK3-205ENST00000610828 SIGLEC1Q9BZZ2 1709 aa18.36■□□□□ 0.53
NEK3-205ENST00000610828 DIP2BQ9P265 1576 aa18.36■□□□□ 0.53
NEK3-205ENST00000610828 KNSTRNQ9Y448 316 aa18.36■□□□□ 0.53
NEK3-205ENST00000610828 SYNMO15061 1565 aa18.35■□□□□ 0.53
NEK3-205ENST00000610828 PPLO60437 1756 aa18.35■□□□□ 0.53
NEK3-205ENST00000610828 SMG6Q86US8 1419 aaKnown RBP18.34■□□□□ 0.53
NEK3-205ENST00000610828 PIK3C2GO75747 1445 aa18.33■□□□□ 0.53
NEK3-205ENST00000610828 TSPOAP1O95153 1857 aa18.33■□□□□ 0.53
NEK3-205ENST00000610828 SLC24A1O60721 1099 aa18.33■□□□□ 0.52
NEK3-205ENST00000610828 KDM5AP29375 1690 aaKnown RBP18.33■□□□□ 0.52
NEK3-205ENST00000610828 ZC3H13Q5T200 1668 aaKnown RBP18.33■□□□□ 0.52
NEK3-205ENST00000610828 RPGRIP1LQ68CZ1 1315 aa18.32■□□□□ 0.52
NEK3-205ENST00000610828 NUDCQ9Y266 331 aa18.32■□□□□ 0.52
NEK3-205ENST00000610828 MYOM1P52179 1685 aa18.32■□□□□ 0.52
NEK3-205ENST00000610828 ARHGAP31Q2M1Z3 1444 aa18.32■□□□□ 0.52
NEK3-205ENST00000610828 SETBP1Q9Y6X0 1596 aa18.31■□□□□ 0.52
NEK3-205ENST00000610828 ERVK-7P63135 1459 aa18.31■□□□□ 0.52
NEK3-205ENST00000610828 PIK3C2BO00750 1634 aa18.31■□□□□ 0.52
NEK3-205ENST00000610828 C14orf93Q9H972 538 aaKnown RBP18.3■□□□□ 0.52
NEK3-205ENST00000610828 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
NEK3-205ENST00000610828 TRAK1Q9UPV9 953 aa18.3■□□□□ 0.52
NEK3-205ENST00000610828 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
NEK3-205ENST00000610828 NUTM2DQ5VT03 806 aaPredicted RBP18.29■□□□□ 0.52
NEK3-205ENST00000610828 CENPJQ9HC77 1338 aaPredicted RBP18.28■□□□□ 0.52
NEK3-205ENST00000610828 MYO3AQ8NEV4 1616 aa18.28■□□□□ 0.52
NEK3-205ENST00000610828 ERICH6BQ5W0A0 696 aa18.28■□□□□ 0.52
NEK3-205ENST00000610828 TMEM132EQ6IEE7 984 aa18.28■□□□□ 0.52
NEK3-205ENST00000610828 TSHZ2Q9NRE2 1034 aa18.28■□□□□ 0.52
NEK3-205ENST00000610828 IDI1Q13907 227 aa18.27■□□□□ 0.52
NEK3-205ENST00000610828 ASXL1Q8IXJ9 1541 aa18.27■□□□□ 0.51
NEK3-205ENST00000610828 VGFO15240 615 aaPredicted RBP18.26■□□□□ 0.51
NEK3-205ENST00000610828 SALL2Q9Y467 1007 aaPredicted RBP18.26■□□□□ 0.51
NEK3-205ENST00000610828 SBNO2Q9Y2G9 1366 aa18.26■□□□□ 0.51
NEK3-205ENST00000610828 ADGRB1O14514 1584 aa18.26■□□□□ 0.51
NEK3-205ENST00000610828 SLC52A1Q9NWF4 448 aa18.25■□□□□ 0.51
NEK3-205ENST00000610828 NEXMIFQ5QGS0 1516 aa18.25■□□□□ 0.51
NEK3-205ENST00000610828 PPP2R1AP30153 589 aa18.24■□□□□ 0.51
NEK3-205ENST00000610828 PREX1Q8TCU6 1659 aa18.23■□□□□ 0.51
NEK3-205ENST00000610828 PPP4R2Q9NY27 417 aa18.23■□□□□ 0.51
NEK3-205ENST00000610828 QRICH2Q9H0J4 1663 aa18.21■□□□□ 0.51
NEK3-205ENST00000610828 NPC1L1Q9UHC9 1359 aa18.21■□□□□ 0.51
NEK3-205ENST00000610828 BLMP54132 1417 aaPredicted RBP18.2■□□□□ 0.5
NEK3-205ENST00000610828 FBXO31Q5XUX0 539 aaPredicted RBP18.2■□□□□ 0.5
NEK3-205ENST00000610828 INSRP06213 1382 aa18.19■□□□□ 0.5
NEK3-205ENST00000610828 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
NEK3-205ENST00000610828 MYO5BQ9ULV0 1848 aa18.19■□□□□ 0.5
NEK3-205ENST00000610828 CARD14Q9BXL6 1004 aa18.18■□□□□ 0.5
NEK3-205ENST00000610828 ADAMTS8Q9UP79 889 aa18.18■□□□□ 0.5
NEK3-205ENST00000610828 WDR43Q15061 677 aaKnown RBP eCLIP18.17■□□□□ 0.5
NEK3-205ENST00000610828 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
NEK3-205ENST00000610828 RNF123Q5XPI4 1314 aa18.17■□□□□ 0.5
NEK3-205ENST00000610828 TMEM131LA2VDJ0 1609 aa18.17■□□□□ 0.5
NEK3-205ENST00000610828 PDE3BQ13370 1112 aa18.17■□□□□ 0.5
NEK3-205ENST00000610828 ZFYVE9O95405 1425 aa18.16■□□□□ 0.5
NEK3-205ENST00000610828 AGLP35573 1532 aa18.15■□□□□ 0.5
NEK3-205ENST00000610828 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
NEK3-205ENST00000610828 MLECQ14165 292 aa18.14■□□□□ 0.49
NEK3-205ENST00000610828 B4GALNT3Q6L9W6 998 aa18.14■□□□□ 0.49
NEK3-205ENST00000610828 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
NEK3-205ENST00000610828 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
NEK3-205ENST00000610828 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
NEK3-205ENST00000610828 KIF13AQ9H1H9 1805 aa18.13■□□□□ 0.49
NEK3-205ENST00000610828 CDCA7LQ96GN5 454 aa18.12■□□□□ 0.49
NEK3-205ENST00000610828 CLTCQ00610 1675 aaKnown RBP18.12■□□□□ 0.49
NEK3-205ENST00000610828 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
NEK3-205ENST00000610828 STK26Q9P289 416 aa18.12■□□□□ 0.49
NEK3-205ENST00000610828 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
NEK3-205ENST00000610828 NSD3Q9BZ95 1437 aa18.11■□□□□ 0.49
NEK3-205ENST00000610828 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
NEK3-205ENST00000610828 TULP4Q9NRJ4 1543 aa18.08■□□□□ 0.49
NEK3-205ENST00000610828 ARHGEF40Q8TER5 1519 aa18.08■□□□□ 0.48
NEK3-205ENST00000610828 CABP2Q9NPB3 220 aa18.06■□□□□ 0.48
NEK3-205ENST00000610828 RRP1P56182 461 aaKnown RBP18.06■□□□□ 0.48
NEK3-205ENST00000610828 MYT1Q01538 1121 aa18.06■□□□□ 0.48
NEK3-205ENST00000610828 MORC1Q86VD1 984 aa18.05■□□□□ 0.48
NEK3-205ENST00000610828 PUS7Q96PZ0 661 aaKnown RBP18.05■□□□□ 0.48
NEK3-205ENST00000610828 SPATA31D1Q6ZQQ2 1576 aa18.04■□□□□ 0.48
NEK3-205ENST00000610828 ESF1Q9H501 851 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms