RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 BCANQ96GW7 911 aa28.86■■■□□ 2.21
TCF3-219ENST00000610756 PLEKHG1Q9ULL1 1385 aa28.85■■■□□ 2.21
TCF3-219ENST00000610756 ACIN1Q9UKV3 1341 aaKnown RBP28.84■■■□□ 2.21
TCF3-219ENST00000610756 TOM1O60784 492 aa28.82■■■□□ 2.2
TCF3-219ENST00000610756 KCNA6P17658 529 aa28.82■■■□□ 2.2
TCF3-219ENST00000610756 LRRC7Q96NW7 1537 aa28.8■■■□□ 2.2
TCF3-219ENST00000610756 TBX22Q9Y458 520 aa28.8■■■□□ 2.2
TCF3-219ENST00000610756 SPHKAPQ2M3C7 1700 aa28.78■■■□□ 2.2
TCF3-219ENST00000610756 NUTM2DQ5VT03 806 aaPredicted RBP28.78■■■□□ 2.2
TCF3-219ENST00000610756 STRCP1A6NGW2 1772 aa28.77■■■□□ 2.2
TCF3-219ENST00000610756 SETD5Q9C0A6 1442 aa28.77■■■□□ 2.2
TCF3-219ENST00000610756 MYO5BQ9ULV0 1848 aa28.77■■■□□ 2.2
TCF3-219ENST00000610756 MPHOSPH9Q99550 1183 aa28.77■■■□□ 2.2
TCF3-219ENST00000610756 TRPM2O94759 1503 aa28.76■■■□□ 2.19
TCF3-219ENST00000610756 ZNF326Q5BKZ1 582 aaKnown RBP28.75■■■□□ 2.19
TCF3-219ENST00000610756 SENP3Q9H4L4 574 aaPredicted RBP28.75■■■□□ 2.19
TCF3-219ENST00000610756 FOXD1Q16676 465 aa28.71■■■□□ 2.19
TCF3-219ENST00000610756 PROSER2Q86WR7 435 aaPredicted RBP28.69■■■□□ 2.18
TCF3-219ENST00000610756 PIP4K2BP78356 416 aa28.69■■■□□ 2.18
TCF3-219ENST00000610756 CLTCL1P53675 1640 aa28.68■■■□□ 2.18
TCF3-219ENST00000610756 ADAMTS13Q76LX8 1427 aa28.68■■■□□ 2.18
TCF3-219ENST00000610756 TMEM94Q12767 1356 aa28.65■■■□□ 2.18
TCF3-219ENST00000610756 PIK3R4Q99570 1358 aa28.65■■■□□ 2.18
TCF3-219ENST00000610756 RAB3GAP2Q9H2M9 1393 aa28.64■■■□□ 2.18
TCF3-219ENST00000610756 RPGRIP1LQ68CZ1 1315 aa28.64■■■□□ 2.18
TCF3-219ENST00000610756 SCAF1Q9H7N4 1312 aaKnown RBP28.64■■■□□ 2.18
TCF3-219ENST00000610756 HRCP23327 699 aa28.63■■■□□ 2.17
TCF3-219ENST00000610756 VGFO15240 615 aaPredicted RBP28.62■■■□□ 2.17
TCF3-219ENST00000610756 NKTRP30414 1462 aaKnown RBP28.61■■■□□ 2.17
TCF3-219ENST00000610756 NWD1Q149M9 1564 aa28.6■■■□□ 2.17
TCF3-219ENST00000610756 DIP2AQ14689 1571 aa28.6■■■□□ 2.17
TCF3-219ENST00000610756 ALKQ9UM73 1620 aa28.59■■■□□ 2.17
TCF3-219ENST00000610756 RBM33Q96EV2 1170 aaKnown RBP28.59■■■□□ 2.17
TCF3-219ENST00000610756 CCDC144AA2RUR9 1427 aa28.58■■■□□ 2.17
TCF3-219ENST00000610756 NEXMIFQ5QGS0 1516 aa28.57■■■□□ 2.16
TCF3-219ENST00000610756 KIF1BO60333 1816 aa28.56■■■□□ 2.16
TCF3-219ENST00000610756 AMOTL2Q9Y2J4 779 aa28.56■■■□□ 2.16
TCF3-219ENST00000610756 CHD2O14647 1828 aaKnown RBP28.56■■■□□ 2.16
TCF3-219ENST00000610756 HSPA1LP34931 641 aa28.55■■■□□ 2.16
TCF3-219ENST00000610756 SETBP1Q9Y6X0 1596 aa28.55■■■□□ 2.16
TCF3-219ENST00000610756 NCOA3Q9Y6Q9 1424 aa28.53■■■□□ 2.16
TCF3-219ENST00000610756 XIRP1Q702N8 1843 aaKnown RBP28.53■■■□□ 2.16
TCF3-219ENST00000610756 PTPRUQ92729 1446 aa28.51■■■□□ 2.15
TCF3-219ENST00000610756 METP08581 1390 aa28.5■■■□□ 2.15
TCF3-219ENST00000610756 NRXN3Q9Y4C0 1643 aa28.49■■■□□ 2.15
TCF3-219ENST00000610756 RGL3Q3MIN7 710 aa28.49■■■□□ 2.15
TCF3-219ENST00000610756 MSH6P52701 1360 aa28.49■■■□□ 2.15
TCF3-219ENST00000610756 SPATA31E1Q6ZUB1 1445 aa28.48■■■□□ 2.15
TCF3-219ENST00000610756 FAM135BQ49AJ0 1406 aa28.46■■■□□ 2.15
TCF3-219ENST00000610756 C19orf44Q9H6X5 657 aa28.45■■■□□ 2.15
TCF3-219ENST00000610756 SLAIN2Q9P270 581 aa28.43■■■□□ 2.14
TCF3-219ENST00000610756 C14orf37Q86TY3 774 aa28.43■■■□□ 2.14
TCF3-219ENST00000610756 ANKRD30BQ9BXX2 1392 aa28.42■■■□□ 2.14
TCF3-219ENST00000610756 ADGRF5Q8IZF2 1346 aa28.4■■■□□ 2.14
TCF3-219ENST00000610756 CADPS2Q86UW7 1296 aa28.39■■■□□ 2.13
TCF3-219ENST00000610756 ATF3P18847 181 aa28.37■■■□□ 2.13
TCF3-219ENST00000610756 PPLO60437 1756 aa28.36■■■□□ 2.13
TCF3-219ENST00000610756 XRN1Q8IZH2 1706 aaKnown RBP28.34■■■□□ 2.13
TCF3-219ENST00000610756 DISP3Q9P2K9 1392 aa28.33■■■□□ 2.13
TCF3-219ENST00000610756 DCCP43146 1447 aa28.27■■■□□ 2.12
TCF3-219ENST00000610756 PRAG1Q86YV5 1406 aa28.27■■■□□ 2.12
TCF3-219ENST00000610756 ROBO2Q9HCK4 1378 aa28.26■■■□□ 2.11
TCF3-219ENST00000610756 SETD1AO15047 1707 aaKnown RBP28.26■■■□□ 2.11
TCF3-219ENST00000610756 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.26■■■□□ 2.11
TCF3-219ENST00000610756 PIK3C2GO75747 1445 aa28.26■■■□□ 2.11
TCF3-219ENST00000610756 PTCH1Q13635 1447 aa28.26■■■□□ 2.11
TCF3-219ENST00000610756 C14orf93Q9H972 538 aaKnown RBP28.25■■■□□ 2.11
TCF3-219ENST00000610756 ROBO1Q9Y6N7 1651 aa28.24■■■□□ 2.11
TCF3-219ENST00000610756 IFT172Q9UG01 1749 aa28.23■■■□□ 2.11
TCF3-219ENST00000610756 STAC3Q96MF2 364 aa28.22■■■□□ 2.11
TCF3-219ENST00000610756 ADGRL3Q9HAR2 1447 aa28.22■■■□□ 2.11
TCF3-219ENST00000610756 TMEM132EQ6IEE7 984 aa28.21■■■□□ 2.11
TCF3-219ENST00000610756 NRXN1Q9ULB1 1477 aa28.21■■■□□ 2.11
TCF3-219ENST00000610756 ABCC11Q96J66 1382 aa28.2■■■□□ 2.1
TCF3-219ENST00000610756 MYOM2P54296 1465 aa28.19■■■□□ 2.1
TCF3-219ENST00000610756 LRPPRCP42704 1394 aaKnown RBP28.19■■■□□ 2.1
TCF3-219ENST00000610756 STK26Q9P289 416 aa28.18■■■□□ 2.1
TCF3-219ENST00000610756 CFAP70Q5T0N1 1121 aa28.18■■■□□ 2.1
TCF3-219ENST00000610756 BRINP3Q76B58 766 aa28.18■■■□□ 2.1
TCF3-219ENST00000610756 DCAF11Q8TEB1 546 aa28.17■■■□□ 2.1
TCF3-219ENST00000610756 SIRT1Q96EB6 747 aa28.16■■■□□ 2.1
TCF3-219ENST00000610756 TECPR2O15040 1411 aa28.15■■■□□ 2.1
TCF3-219ENST00000610756 MST1RQ04912 1400 aa28.15■■■□□ 2.1
TCF3-219ENST00000610756 KDM2AQ9Y2K7 1162 aa28.15■■■□□ 2.1
TCF3-219ENST00000610756 WAPLQ7Z5K2 1190 aa28.13■■■□□ 2.09
TCF3-219ENST00000610756 YTHDC2Q9H6S0 1430 aaKnown RBP28.12■■■□□ 2.09
TCF3-219ENST00000610756 DHX57Q6P158 1386 aaKnown RBP28.12■■■□□ 2.09
TCF3-219ENST00000610756 MED1Q15648 1581 aaPredicted RBP28.11■■■□□ 2.09
TCF3-219ENST00000610756 ILDR2Q71H61 639 aa28.1■■■□□ 2.09
TCF3-219ENST00000610756 ASXL1Q8IXJ9 1541 aa28.09■■■□□ 2.09
TCF3-219ENST00000610756 NALCNQ8IZF0 1738 aa28.07■■■□□ 2.08
TCF3-219ENST00000610756 JCADQ9P266 1359 aa28.07■■■□□ 2.08
TCF3-219ENST00000610756 C1orf167Q5SNV9 1468 aa28.06■■■□□ 2.08
TCF3-219ENST00000610756 PHLPP1O60346 1717 aa28.05■■■□□ 2.08
TCF3-219ENST00000610756 TRIM26Q12899 539 aaPredicted RBP28.05■■■□□ 2.08
TCF3-219ENST00000610756 AHDC1Q5TGY3 1603 aaPredicted RBP28.04■■■□□ 2.08
TCF3-219ENST00000610756 PHF23Q9BUL5 403 aaPredicted RBP28.03■■■□□ 2.08
TCF3-219ENST00000610756 PLEKHH1Q9ULM0 1364 aa28.03■■■□□ 2.08
TCF3-219ENST00000610756 ORAI2Q96SN7 254 aa28.02■■■□□ 2.08
TCF3-219ENST00000610756 LAMC1P11047 1609 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms