RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 HDGFP51858 240 aaKnown RBP20.55■□□□□ 0.88
POLR2J3-219ENST00000608621 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
POLR2J3-219ENST00000608621 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
POLR2J3-219ENST00000608621 ROCK1Q13464 1354 aa20.53■□□□□ 0.88
POLR2J3-219ENST00000608621 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.88
POLR2J3-219ENST00000608621 RIMS2Q9UQ26 1411 aa20.52■□□□□ 0.87
POLR2J3-219ENST00000608621 UNC13BO14795 1591 aa20.51■□□□□ 0.87
POLR2J3-219ENST00000608621 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
POLR2J3-219ENST00000608621 GCC2Q8IWJ2 1684 aa20.5■□□□□ 0.87
POLR2J3-219ENST00000608621 ZFYVE9O95405 1425 aa20.5■□□□□ 0.87
POLR2J3-219ENST00000608621 FAM135BQ49AJ0 1406 aa20.5■□□□□ 0.87
POLR2J3-219ENST00000608621 PLEKHG1Q9ULL1 1385 aa20.49■□□□□ 0.87
POLR2J3-219ENST00000608621 NUP155O75694 1391 aa20.48■□□□□ 0.87
POLR2J3-219ENST00000608621 NUTM2DQ5VT03 806 aaPredicted RBP20.48■□□□□ 0.87
POLR2J3-219ENST00000608621 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
POLR2J3-219ENST00000608621 TMEM131LA2VDJ0 1609 aa20.48■□□□□ 0.87
POLR2J3-219ENST00000608621 TBX22Q9Y458 520 aa20.47■□□□□ 0.87
POLR2J3-219ENST00000608621 E9PCH4 1651 aa20.47■□□□□ 0.87
POLR2J3-219ENST00000608621 NKTRP30414 1462 aaKnown RBP20.45■□□□□ 0.86
POLR2J3-219ENST00000608621 NWD1Q149M9 1564 aa20.44■□□□□ 0.86
POLR2J3-219ENST00000608621 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
POLR2J3-219ENST00000608621 CHD2O14647 1828 aaKnown RBP20.43■□□□□ 0.86
POLR2J3-219ENST00000608621 MSH6P52701 1360 aa20.43■□□□□ 0.86
POLR2J3-219ENST00000608621 SLAIN2Q9P270 581 aa20.42■□□□□ 0.86
POLR2J3-219ENST00000608621 RGS17Q9UGC6 210 aaPredicted RBP20.4■□□□□ 0.86
POLR2J3-219ENST00000608621 ROBO1Q9Y6N7 1651 aa20.39■□□□□ 0.86
POLR2J3-219ENST00000608621 ADAMTS13Q76LX8 1427 aa20.38■□□□□ 0.85
POLR2J3-219ENST00000608621 C14orf37Q86TY3 774 aa20.37■□□□□ 0.85
POLR2J3-219ENST00000608621 AMOTL2Q9Y2J4 779 aa20.34■□□□□ 0.85
POLR2J3-219ENST00000608621 NCOA3Q9Y6Q9 1424 aa20.34■□□□□ 0.85
POLR2J3-219ENST00000608621 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
POLR2J3-219ENST00000608621 ZNF326Q5BKZ1 582 aaKnown RBP20.33■□□□□ 0.85
POLR2J3-219ENST00000608621 C19orf44Q9H6X5 657 aa20.32■□□□□ 0.84
POLR2J3-219ENST00000608621 DIP2AQ14689 1571 aa20.3■□□□□ 0.84
POLR2J3-219ENST00000608621 ATF3P18847 181 aa20.3■□□□□ 0.84
POLR2J3-219ENST00000608621 CADPS2Q86UW7 1296 aa20.3■□□□□ 0.84
POLR2J3-219ENST00000608621 PTPRUQ92729 1446 aa20.29■□□□□ 0.84
POLR2J3-219ENST00000608621 POTEAQ6S8J7 498 aa20.29■□□□□ 0.84
POLR2J3-219ENST00000608621 RRBP1Q9P2E9 1410 aaKnown RBP20.28■□□□□ 0.84
POLR2J3-219ENST00000608621 TRPM2O94759 1503 aa20.27■□□□□ 0.84
POLR2J3-219ENST00000608621 PHLPP1O60346 1717 aa20.27■□□□□ 0.84
POLR2J3-219ENST00000608621 SPHKAPQ2M3C7 1700 aa20.27■□□□□ 0.84
POLR2J3-219ENST00000608621 JCADQ9P266 1359 aa20.26■□□□□ 0.83
POLR2J3-219ENST00000608621 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.26■□□□□ 0.83
POLR2J3-219ENST00000608621 NAIPQ13075 1403 aa20.26■□□□□ 0.83
POLR2J3-219ENST00000608621 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
POLR2J3-219ENST00000608621 NRXN3Q9Y4C0 1643 aa20.22■□□□□ 0.83
POLR2J3-219ENST00000608621 METP08581 1390 aa20.21■□□□□ 0.83
POLR2J3-219ENST00000608621 SETBP1Q9Y6X0 1596 aa20.21■□□□□ 0.83
POLR2J3-219ENST00000608621 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
POLR2J3-219ENST00000608621 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
POLR2J3-219ENST00000608621 CLTCL1P53675 1640 aa20.2■□□□□ 0.82
POLR2J3-219ENST00000608621 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
POLR2J3-219ENST00000608621 SPATA31A6Q5VVP1 1343 aa20.17■□□□□ 0.82
POLR2J3-219ENST00000608621 NEXMIFQ5QGS0 1516 aa20.17■□□□□ 0.82
POLR2J3-219ENST00000608621 XRN1Q8IZH2 1706 aaKnown RBP20.16■□□□□ 0.82
POLR2J3-219ENST00000608621 KIF1BO60333 1816 aa20.16■□□□□ 0.82
POLR2J3-219ENST00000608621 VGFO15240 615 aaPredicted RBP20.15■□□□□ 0.82
POLR2J3-219ENST00000608621 DCCP43146 1447 aa20.15■□□□□ 0.82
POLR2J3-219ENST00000608621 AHDC1Q5TGY3 1603 aaPredicted RBP20.15■□□□□ 0.82
POLR2J3-219ENST00000608621 HFM1A2PYH4 1435 aa20.14■□□□□ 0.81
POLR2J3-219ENST00000608621 MEX3CQ5U5Q3 659 aaKnown RBP20.14■□□□□ 0.81
POLR2J3-219ENST00000608621 MST1RQ04912 1400 aa20.12■□□□□ 0.81
POLR2J3-219ENST00000608621 LRP6O75581 1613 aa20.12■□□□□ 0.81
POLR2J3-219ENST00000608621 RPGRIP1LQ68CZ1 1315 aa20.11■□□□□ 0.81
POLR2J3-219ENST00000608621 NUTM2BA6NNL0 878 aaPredicted RBP20.1■□□□□ 0.81
POLR2J3-219ENST00000608621 NUTM2EB1AL46 878 aaPredicted RBP20.1■□□□□ 0.81
POLR2J3-219ENST00000608621 NUTM2AQ8IVF1 878 aaPredicted RBP20.1■□□□□ 0.81
POLR2J3-219ENST00000608621 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
POLR2J3-219ENST00000608621 FOXD1Q16676 465 aa20.09■□□□□ 0.81
POLR2J3-219ENST00000608621 ZNF772Q68DY9 489 aaPredicted RBP20.09■□□□□ 0.81
POLR2J3-219ENST00000608621 ASXL1Q8IXJ9 1541 aa20.08■□□□□ 0.81
POLR2J3-219ENST00000608621 SHPRHQ149N8 1683 aa20.08■□□□□ 0.81
POLR2J3-219ENST00000608621 DDX17Q92841 729 aaKnown RBP20.08■□□□□ 0.81
POLR2J3-219ENST00000608621 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.81
POLR2J3-219ENST00000608621 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
POLR2J3-219ENST00000608621 ROBO2Q9HCK4 1378 aa20.04■□□□□ 0.8
POLR2J3-219ENST00000608621 NALCNQ8IZF0 1738 aa20.03■□□□□ 0.8
POLR2J3-219ENST00000608621 NHSL1Q5SYE7 1610 aa20.02■□□□□ 0.8
POLR2J3-219ENST00000608621 RGL3Q3MIN7 710 aa20.02■□□□□ 0.8
POLR2J3-219ENST00000608621 PTCH1Q13635 1447 aa20.02■□□□□ 0.79
POLR2J3-219ENST00000608621 C1orf167Q5SNV9 1468 aa20.01■□□□□ 0.79
POLR2J3-219ENST00000608621 ORAI2Q96SN7 254 aa20.01■□□□□ 0.79
POLR2J3-219ENST00000608621 MPHOSPH9Q99550 1183 aa20.01■□□□□ 0.79
POLR2J3-219ENST00000608621 SETD1AO15047 1707 aaKnown RBP20.01■□□□□ 0.79
POLR2J3-219ENST00000608621 RXRBP28702 533 aa20■□□□□ 0.79
POLR2J3-219ENST00000608621 PPLO60437 1756 aa20■□□□□ 0.79
POLR2J3-219ENST00000608621 ADGRF5Q8IZF2 1346 aa20■□□□□ 0.79
POLR2J3-219ENST00000608621 AFF2P51816 1311 aa19.99■□□□□ 0.79
POLR2J3-219ENST00000608621 PNPLA6Q8IY17 1366 aa19.97■□□□□ 0.79
POLR2J3-219ENST00000608621 CCDC144AA2RUR9 1427 aa19.97■□□□□ 0.79
POLR2J3-219ENST00000608621 C8orf37Q96NL8 207 aa19.96■□□□□ 0.79
POLR2J3-219ENST00000608621 PRAG1Q86YV5 1406 aa19.95■□□□□ 0.78
POLR2J3-219ENST00000608621 STK26Q9P289 416 aa19.95■□□□□ 0.78
POLR2J3-219ENST00000608621 SOS2Q07890 1332 aaPredicted RBP19.95■□□□□ 0.78
POLR2J3-219ENST00000608621 ADAMTS2O95450 1211 aa19.93■□□□□ 0.78
POLR2J3-219ENST00000608621 UPF1Q92900 1129 aaKnown RBP eCLIP19.93■□□□□ 0.78
POLR2J3-219ENST00000608621 QTRT2Q9H974 415 aaKnown RBP19.93■□□□□ 0.78
POLR2J3-219ENST00000608621 SPATA31E1Q6ZUB1 1445 aa19.93■□□□□ 0.78
POLR2J3-219ENST00000608621 ESCO1Q5FWF5 840 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms