RNA–Protein interactions for RNA: ENST00000608535.1

SMIM8-208, Transcript of small integral membrane protein 8, humanhuman

Gene SMIM8, Length 3,915 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-208ENST00000608535 CECR2Q9BXF3 1484 aa12.09□□□□□ -0.47
SMIM8-208ENST00000608535 ZC3H4Q9UPT8 1303 aaKnown RBP12.09□□□□□ -0.47
SMIM8-208ENST00000608535 G3BP2Q9UN86 482 aaKnown RBP12.09□□□□□ -0.47
SMIM8-208ENST00000608535 PARNO95453 639 aaKnown RBP12.08□□□□□ -0.47
SMIM8-208ENST00000608535 CDCA7Q9BWT1 371 aaPredicted RBP12.08□□□□□ -0.47
SMIM8-208ENST00000608535 TCF3P15923 654 aa12.08□□□□□ -0.48
SMIM8-208ENST00000608535 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
SMIM8-208ENST00000608535 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
SMIM8-208ENST00000608535 TRIM44Q96DX7 344 aaPredicted RBP12.08□□□□□ -0.48
SMIM8-208ENST00000608535 ZMYND10O75800 440 aa12.07□□□□□ -0.48
SMIM8-208ENST00000608535 RFX1P22670 979 aa12.07□□□□□ -0.48
SMIM8-208ENST00000608535 NBPF20Q3BBV1 942 aa12.07□□□□□ -0.48
SMIM8-208ENST00000608535 GPATCH3Q96I76 525 aa12.07□□□□□ -0.48
SMIM8-208ENST00000608535 CTDP1Q9Y5B0 961 aaPredicted RBP12.07□□□□□ -0.48
SMIM8-208ENST00000608535 A6NJR5 290 aa12.06□□□□□ -0.48
SMIM8-208ENST00000608535 HDAC1Q13547 482 aaPredicted RBP12.05□□□□□ -0.48
SMIM8-208ENST00000608535 ARIH1Q9Y4X5 557 aaPredicted RBP12.05□□□□□ -0.48
SMIM8-208ENST00000608535 CC2D2AQ9P2K1 1620 aa12.05□□□□□ -0.48
SMIM8-208ENST00000608535 hCG_2014768A0A024R1R8 64 aa12.05□□□□□ -0.48
SMIM8-208ENST00000608535 SKIV2LQ15477 1246 aaKnown RBP12.05□□□□□ -0.48
SMIM8-208ENST00000608535 PIK3R5Q8WYR1 880 aa12.05□□□□□ -0.48
SMIM8-208ENST00000608535 MMP14P50281 582 aa12.04□□□□□ -0.48
SMIM8-208ENST00000608535 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMIM8-208ENST00000608535 ISY1Q9ULR0 285 aaKnown RBP12.04□□□□□ -0.48
SMIM8-208ENST00000608535 EGFL6Q8IUX8 553 aa12.04□□□□□ -0.48
SMIM8-208ENST00000608535 SSR1P43307 286 aaKnown RBP12.04□□□□□ -0.48
SMIM8-208ENST00000608535 UBA5Q9GZZ9 404 aa12.03□□□□□ -0.48
SMIM8-208ENST00000608535 MAGEC2Q9UBF1 373 aaPredicted RBP12.03□□□□□ -0.48
SMIM8-208ENST00000608535 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
SMIM8-208ENST00000608535 CSB-PGBD3P0DP91 1061 aa12.02□□□□□ -0.49
SMIM8-208ENST00000608535 HSP90AB3PQ58FF7 597 aa12.02□□□□□ -0.49
SMIM8-208ENST00000608535 AK7Q96M32 723 aa12.02□□□□□ -0.49
SMIM8-208ENST00000608535 IGSF5Q9NSI5 407 aa12.02□□□□□ -0.49
SMIM8-208ENST00000608535 OTUD6BQ8N6M0 293 aa12.01□□□□□ -0.49
SMIM8-208ENST00000608535 CCDC189A1A4V9 331 aa12.01□□□□□ -0.49
SMIM8-208ENST00000608535 DNTTIP2Q5QJE6 756 aaKnown RBP12□□□□□ -0.49
SMIM8-208ENST00000608535 ZCRB1Q8TBF4 217 aaKnown RBP12□□□□□ -0.49
SMIM8-208ENST00000608535 UBXN4Q92575 508 aa12□□□□□ -0.49
SMIM8-208ENST00000608535 PDE4DQ08499 809 aa12□□□□□ -0.49
SMIM8-208ENST00000608535 DPH6Q7L8W6 267 aa12□□□□□ -0.49
SMIM8-208ENST00000608535 SCP2P22307 547 aa11.99□□□□□ -0.49
SMIM8-208ENST00000608535 SND1Q7KZF4 910 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMIM8-208ENST00000608535 CEP120Q8N960 986 aa11.99□□□□□ -0.49
SMIM8-208ENST00000608535 TCERG1O14776 1098 aaKnown RBP11.98□□□□□ -0.49
SMIM8-208ENST00000608535 U2SURPO15042 1029 aaKnown RBP11.98□□□□□ -0.49
SMIM8-208ENST00000608535 VGFO15240 615 aaPredicted RBP11.98□□□□□ -0.49
SMIM8-208ENST00000608535 CCDC146Q8IYE0 955 aa11.98□□□□□ -0.49
SMIM8-208ENST00000608535 TERF1P54274 439 aa11.98□□□□□ -0.49
SMIM8-208ENST00000608535 IGBP1P78318 339 aa11.98□□□□□ -0.49
SMIM8-208ENST00000608535 CCDC194A0A1B0GVG4 234 aa11.97□□□□□ -0.49
SMIM8-208ENST00000608535 PDILTQ8N807 584 aa11.97□□□□□ -0.49
SMIM8-208ENST00000608535 IRF6O14896 467 aa11.97□□□□□ -0.49
SMIM8-208ENST00000608535 NAALADL2Q58DX5 795 aa11.97□□□□□ -0.49
SMIM8-208ENST00000608535 TSPAN18Q96SJ8 248 aa11.97□□□□□ -0.49
SMIM8-208ENST00000608535 TPX2Q9ULW0 747 aaKnown RBP11.97□□□□□ -0.49
SMIM8-208ENST00000608535 CALD1Q05682 793 aaKnown RBP11.96□□□□□ -0.49
SMIM8-208ENST00000608535 NBPF9Q3BBW0 867 aa11.96□□□□□ -0.49
SMIM8-208ENST00000608535 CCDC184Q52MB2 194 aa11.96□□□□□ -0.49
SMIM8-208ENST00000608535 SMC5Q8IY18 1101 aa11.96□□□□□ -0.49
SMIM8-208ENST00000608535 SDR16C5Q8N3Y7 309 aa11.96□□□□□ -0.5
SMIM8-208ENST00000608535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.96□□□□□ -0.5
SMIM8-208ENST00000608535 HSP90AA1P07900 732 aaKnown RBP11.95□□□□□ -0.5
SMIM8-208ENST00000608535 LIG1P18858 919 aa11.95□□□□□ -0.5
SMIM8-208ENST00000608535 HSCBQ8IWL3 235 aa11.95□□□□□ -0.5
SMIM8-208ENST00000608535 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
SMIM8-208ENST00000608535 PROCA1Q8NCQ7 364 aaPredicted RBP11.95□□□□□ -0.5
SMIM8-208ENST00000608535 CARD10Q9BWT7 1032 aa11.95□□□□□ -0.5
SMIM8-208ENST00000608535 SBNO2Q9Y2G9 1366 aa11.95□□□□□ -0.5
SMIM8-208ENST00000608535 STK25O00506 426 aa11.95□□□□□ -0.5
SMIM8-208ENST00000608535 C11orf96Q7Z7L8 435 aa11.95□□□□□ -0.5
SMIM8-208ENST00000608535 POLA2Q14181 598 aa11.94□□□□□ -0.5
SMIM8-208ENST00000608535 ZRANB2O95218 330 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMIM8-208ENST00000608535 RBM46Q8TBY0 533 aaKnown RBP11.94□□□□□ -0.5
SMIM8-208ENST00000608535 MRVI1Q9Y6F6 885 aa11.94□□□□□ -0.5
SMIM8-208ENST00000608535 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
SMIM8-208ENST00000608535 MCM6Q14566 821 aa11.93□□□□□ -0.5
SMIM8-208ENST00000608535 BIRC2Q13490 618 aa11.93□□□□□ -0.5
SMIM8-208ENST00000608535 TTC30BQ8N4P2 665 aa11.93□□□□□ -0.5
SMIM8-208ENST00000608535 GIPC2Q8TF65 315 aa11.93□□□□□ -0.5
SMIM8-208ENST00000608535 FAN1Q9Y2M0 1017 aa11.92□□□□□ -0.5
SMIM8-208ENST00000608535 COMMD10Q9Y6G5 202 aa11.92□□□□□ -0.5
SMIM8-208ENST00000608535 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
SMIM8-208ENST00000608535 RPGRIP1LQ68CZ1 1315 aa11.92□□□□□ -0.5
SMIM8-208ENST00000608535 MS4A1P11836 297 aa11.92□□□□□ -0.5
SMIM8-208ENST00000608535 MCCD1P59942 119 aaPredicted RBP11.92□□□□□ -0.5
SMIM8-208ENST00000608535 MSL3Q8N5Y2 521 aaKnown RBP11.92□□□□□ -0.5
SMIM8-208ENST00000608535 FBXO9Q9UK97 447 aaPredicted RBP11.92□□□□□ -0.5
SMIM8-208ENST00000608535 APLP1P51693 650 aa11.92□□□□□ -0.5
SMIM8-208ENST00000608535 ZRSR2Q15696 482 aaKnown RBP11.92□□□□□ -0.5
SMIM8-208ENST00000608535 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
SMIM8-208ENST00000608535 ENOX2Q16206 610 aaKnown RBP11.91□□□□□ -0.5
SMIM8-208ENST00000608535 USP5P45974 858 aa11.91□□□□□ -0.5
SMIM8-208ENST00000608535 CSPP1Q1MSJ5 1256 aa11.91□□□□□ -0.5
SMIM8-208ENST00000608535 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
SMIM8-208ENST00000608535 DDX46Q7L014 1031 aaKnown RBP11.91□□□□□ -0.5
SMIM8-208ENST00000608535 CT47B1P0C2W7 299 aaPredicted RBP11.91□□□□□ -0.5
SMIM8-208ENST00000608535 GNL3LQ9NVN8 582 aaKnown RBP11.91□□□□□ -0.5
SMIM8-208ENST00000608535 DMRT2Q9Y5R5 561 aa11.9□□□□□ -0.5
SMIM8-208ENST00000608535 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
SMIM8-208ENST00000608535 TMA7Q9Y2S6 64 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms