RNA–Protein interactions for RNA: ENST00000608535.1

SMIM8-208, Transcript of small integral membrane protein 8, humanhuman

Gene SMIM8, Length 3,915 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-208ENST00000608535 SLC24A1O60721 1099 aa19■□□□□ 0.63
SMIM8-208ENST00000608535 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
SMIM8-208ENST00000608535 MYT1Q01538 1121 aa17.3■□□□□ 0.36
SMIM8-208ENST00000608535 DAXXQ9UER7 740 aaPredicted RBP17.25■□□□□ 0.35
SMIM8-208ENST00000608535 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
SMIM8-208ENST00000608535 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
SMIM8-208ENST00000608535 TTBK1Q5TCY1 1321 aaPredicted RBP16.99■□□□□ 0.31
SMIM8-208ENST00000608535 PELP1Q8IZL8 1130 aaKnown RBP16.98■□□□□ 0.31
SMIM8-208ENST00000608535 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
SMIM8-208ENST00000608535 PRKCSHP14314 528 aaPredicted RBP16.89■□□□□ 0.29
SMIM8-208ENST00000608535 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
SMIM8-208ENST00000608535 NCBP3Q53F19 620 aaKnown RBP16.7■□□□□ 0.26
SMIM8-208ENST00000608535 APLP2Q06481 763 aa16.56■□□□□ 0.24
SMIM8-208ENST00000608535 AMER1Q5JTC6 1135 aaPredicted RBP16.35■□□□□ 0.21
SMIM8-208ENST00000608535 RANGAP1P46060 587 aaPredicted RBP16.33■□□□□ 0.2
SMIM8-208ENST00000608535 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
SMIM8-208ENST00000608535 KCNA4P22459 653 aa16.15■□□□□ 0.18
SMIM8-208ENST00000608535 EIF5BO60841 1220 aaKnown RBP16.14■□□□□ 0.17
SMIM8-208ENST00000608535 TULP1O00294 542 aaPredicted RBP16.11■□□□□ 0.17
SMIM8-208ENST00000608535 ARXQ96QS3 562 aa16.1■□□□□ 0.17
SMIM8-208ENST00000608535 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
SMIM8-208ENST00000608535 KLHL34Q8N239 644 aa15.85■□□□□ 0.13
SMIM8-208ENST00000608535 PODXL2Q9NZ53 605 aa15.84■□□□□ 0.13
SMIM8-208ENST00000608535 HOMEZQ8IX15 550 aa15.81■□□□□ 0.12
SMIM8-208ENST00000608535 TAOK2Q9UL54 1235 aa15.77■□□□□ 0.12
SMIM8-208ENST00000608535 TPRNQ4KMQ1 711 aa15.75■□□□□ 0.11
SMIM8-208ENST00000608535 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
SMIM8-208ENST00000608535 AEBP2Q6ZN18 517 aaPredicted RBP15.58■□□□□ 0.08
SMIM8-208ENST00000608535 BCANQ96GW7 911 aa15.54■□□□□ 0.08
SMIM8-208ENST00000608535 C14orf37Q86TY3 774 aa15.38■□□□□ 0.05
SMIM8-208ENST00000608535 NPM2Q86SE8 214 aaKnown RBP15.38■□□□□ 0.05
SMIM8-208ENST00000608535 HAP1P54257 671 aaPredicted RBP15.37■□□□□ 0.05
SMIM8-208ENST00000608535 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
SMIM8-208ENST00000608535 BCL11AQ9H165 835 aa15.33■□□□□ 0.04
SMIM8-208ENST00000608535 NISCHQ9Y2I1 1504 aa15.31■□□□□ 0.04
SMIM8-208ENST00000608535 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
SMIM8-208ENST00000608535 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
SMIM8-208ENST00000608535 PLCB2Q00722 1185 aa15.11■□□□□ 0.01
SMIM8-208ENST00000608535 SUPT5HO00267 1087 aaKnown RBP15.08■□□□□ 0
SMIM8-208ENST00000608535 TRIM26Q12899 539 aaPredicted RBP14.91□□□□□ -0.02
SMIM8-208ENST00000608535 PDIA4P13667 645 aaKnown RBP14.88□□□□□ -0.03
SMIM8-208ENST00000608535 TMEM132AQ24JP5 1023 aa14.88□□□□□ -0.03
SMIM8-208ENST00000608535 FAM9AQ8IZU1 332 aaPredicted RBP14.87□□□□□ -0.03
SMIM8-208ENST00000608535 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
SMIM8-208ENST00000608535 LOC105371045A0A1W2PR82 267 aa14.79□□□□□ -0.04
SMIM8-208ENST00000608535 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
SMIM8-208ENST00000608535 UBTFP17480 764 aaKnown RBP14.73□□□□□ -0.05
SMIM8-208ENST00000608535 CHMP4AQ9BY43 222 aa14.7□□□□□ -0.06
SMIM8-208ENST00000608535 PDE4CQ08493 712 aa14.68□□□□□ -0.06
SMIM8-208ENST00000608535 CDK11BP21127 795 aaKnown RBP14.67□□□□□ -0.06
SMIM8-208ENST00000608535 CDK11AQ9UQ88 783 aaPredicted RBP14.67□□□□□ -0.06
SMIM8-208ENST00000608535 DHX37Q8IY37 1157 aaKnown RBP14.65□□□□□ -0.06
SMIM8-208ENST00000608535 UBE2Q2Q8WVN8 375 aa14.62□□□□□ -0.07
SMIM8-208ENST00000608535 POLR3GLQ9BT43 218 aa14.58□□□□□ -0.08
SMIM8-208ENST00000608535 NEFLP07196 543 aa14.56□□□□□ -0.08
SMIM8-208ENST00000608535 FKBP8Q14318 412 aa14.55□□□□□ -0.08
SMIM8-208ENST00000608535 HRCP23327 699 aa14.51□□□□□ -0.09
SMIM8-208ENST00000608535 FBLN2P98095 1184 aa14.5□□□□□ -0.09
SMIM8-208ENST00000608535 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.1
SMIM8-208ENST00000608535 VSIG10Q8N0Z9 540 aa14.45□□□□□ -0.1
SMIM8-208ENST00000608535 CFAP44Q96MT7 982 aa14.44□□□□□ -0.1
SMIM8-208ENST00000608535 PKNOX2Q96KN3 472 aa14.42□□□□□ -0.1
SMIM8-208ENST00000608535 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
SMIM8-208ENST00000608535 ZBTB22O15209 634 aa14.38□□□□□ -0.11
SMIM8-208ENST00000608535 BRD2P25440 801 aaKnown RBP14.38□□□□□ -0.11
SMIM8-208ENST00000608535 ARID3AQ99856 593 aa14.38□□□□□ -0.11
SMIM8-208ENST00000608535 TAF7LQ5H9L4 462 aa14.34□□□□□ -0.11
SMIM8-208ENST00000608535 BCL11BQ9C0K0 894 aaPredicted RBP14.3□□□□□ -0.12
SMIM8-208ENST00000608535 IGSF3O75054 1194 aa14.26□□□□□ -0.13
SMIM8-208ENST00000608535 CCDC136Q96JN2 1154 aa14.22□□□□□ -0.13
SMIM8-208ENST00000608535 ADRA2BP18089 450 aa14.22□□□□□ -0.13
SMIM8-208ENST00000608535 CNKSR2Q8WXI2 1034 aa14.21□□□□□ -0.13
SMIM8-208ENST00000608535 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.14
SMIM8-208ENST00000608535 A0A0U1RQG5 324 aaPredicted RBP14.2□□□□□ -0.14
SMIM8-208ENST00000608535 NBR1Q14596 966 aa14.18□□□□□ -0.14
SMIM8-208ENST00000608535 HSP90B1P14625 803 aaKnown RBP14.17□□□□□ -0.14
SMIM8-208ENST00000608535 CENPBP07199 599 aaPredicted RBP14.16□□□□□ -0.14
SMIM8-208ENST00000608535 CCDC9Q9Y3X0 531 aaKnown RBP14.14□□□□□ -0.15
SMIM8-208ENST00000608535 HMGB1P09429 215 aaKnown RBP14.13□□□□□ -0.15
SMIM8-208ENST00000608535 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
SMIM8-208ENST00000608535 IRX6P78412 446 aaPredicted RBP14.12□□□□□ -0.15
SMIM8-208ENST00000608535 ZEB1P37275 1124 aaPredicted RBP14.1□□□□□ -0.15
SMIM8-208ENST00000608535 ANO8Q9HCE9 1232 aaPredicted RBP14.01□□□□□ -0.17
SMIM8-208ENST00000608535 PAXIP1Q6ZW49 1069 aaPredicted RBP14□□□□□ -0.17
SMIM8-208ENST00000608535 FGD1P98174 961 aa13.97□□□□□ -0.17
SMIM8-208ENST00000608535 ZBTB7CA1YPR0 619 aa13.95□□□□□ -0.18
SMIM8-208ENST00000608535 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
SMIM8-208ENST00000608535 NAP1L5Q96NT1 182 aaPredicted RBP13.88□□□□□ -0.19
SMIM8-208ENST00000608535 ZNF326Q5BKZ1 582 aaKnown RBP13.86□□□□□ -0.19
SMIM8-208ENST00000608535 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
SMIM8-208ENST00000608535 ZNF526Q8TF50 670 aaPredicted RBP13.81□□□□□ -0.2
SMIM8-208ENST00000608535 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.8□□□□□ -0.2
SMIM8-208ENST00000608535 ZNF428Q96B54 188 aa13.77□□□□□ -0.2
SMIM8-208ENST00000608535 BCCIPQ9P287 314 aaKnown RBP eCLIP13.77□□□□□ -0.2
SMIM8-208ENST00000608535 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
SMIM8-208ENST00000608535 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMIM8-208ENST00000608535 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
SMIM8-208ENST00000608535 ZNF592Q92610 1267 aa13.73□□□□□ -0.21
SMIM8-208ENST00000608535 PUS7Q96PZ0 661 aaKnown RBP13.72□□□□□ -0.21
SMIM8-208ENST00000608535 NECTIN2Q92692 538 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms