RNA–Protein interactions for RNA: ENST00000608223.6

LINC00854-213, Long intergenic non-protein coding RNA 854, humanhuman

APPRIS ALT2 TSL 5

Gene LINC00854, Length 391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-213ENST00000608223 CHGAP10645 457 aaKnown RBP21.72■■□□□ 1.07
LINC00854-213ENST00000608223 KCNA6P17658 529 aa21.72■■□□□ 1.07
LINC00854-213ENST00000608223 IQGAP3Q86VI3 1631 aa21.72■■□□□ 1.07
LINC00854-213ENST00000608223 TMEM131LA2VDJ0 1609 aa21.71■■□□□ 1.07
LINC00854-213ENST00000608223 MED1Q15648 1581 aaPredicted RBP21.7■■□□□ 1.06
LINC00854-213ENST00000608223 NUP155O75694 1391 aa21.69■■□□□ 1.06
LINC00854-213ENST00000608223 PPP1R15AO75807 674 aaPredicted RBP21.68■■□□□ 1.06
LINC00854-213ENST00000608223 PROSER2Q86WR7 435 aaPredicted RBP21.68■■□□□ 1.06
LINC00854-213ENST00000608223 RBM33Q96EV2 1170 aaKnown RBP21.68■■□□□ 1.06
LINC00854-213ENST00000608223 TMEM94Q12767 1356 aa21.68■■□□□ 1.06
LINC00854-213ENST00000608223 ZFYVE9O95405 1425 aa21.68■■□□□ 1.06
LINC00854-213ENST00000608223 RIMS2Q9UQ26 1411 aa21.68■■□□□ 1.06
LINC00854-213ENST00000608223 HDGFP51858 240 aaKnown RBP21.67■■□□□ 1.06
LINC00854-213ENST00000608223 CHD2O14647 1828 aaKnown RBP21.64■■□□□ 1.06
LINC00854-213ENST00000608223 PLEKHG1Q9ULL1 1385 aa21.64■■□□□ 1.06
LINC00854-213ENST00000608223 NUTM2DQ5VT03 806 aaPredicted RBP21.64■■□□□ 1.05
LINC00854-213ENST00000608223 NWD1Q149M9 1564 aa21.64■■□□□ 1.05
LINC00854-213ENST00000608223 NKTRP30414 1462 aaKnown RBP21.61■■□□□ 1.05
LINC00854-213ENST00000608223 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.61■■□□□ 1.05
LINC00854-213ENST00000608223 PHF23Q9BUL5 403 aaPredicted RBP21.59■■□□□ 1.05
LINC00854-213ENST00000608223 SPHKAPQ2M3C7 1700 aa21.58■■□□□ 1.05
LINC00854-213ENST00000608223 TBX22Q9Y458 520 aa21.58■■□□□ 1.05
LINC00854-213ENST00000608223 FAM135BQ49AJ0 1406 aa21.57■■□□□ 1.04
LINC00854-213ENST00000608223 RRBP1Q9P2E9 1410 aaKnown RBP21.57■■□□□ 1.04
LINC00854-213ENST00000608223 ROBO1Q9Y6N7 1651 aa21.56■■□□□ 1.04
LINC00854-213ENST00000608223 MSH6P52701 1360 aa21.55■■□□□ 1.04
LINC00854-213ENST00000608223 ADAMTS13Q76LX8 1427 aa21.55■■□□□ 1.04
LINC00854-213ENST00000608223 DIP2AQ14689 1571 aa21.51■■□□□ 1.03
LINC00854-213ENST00000608223 NAIPQ13075 1403 aa21.5■■□□□ 1.03
LINC00854-213ENST00000608223 ZNF326Q5BKZ1 582 aaKnown RBP21.5■■□□□ 1.03
LINC00854-213ENST00000608223 SLAIN2Q9P270 581 aa21.5■■□□□ 1.03
LINC00854-213ENST00000608223 C14orf37Q86TY3 774 aa21.49■■□□□ 1.03
LINC00854-213ENST00000608223 TRPM2O94759 1503 aa21.47■■□□□ 1.03
LINC00854-213ENST00000608223 PIK3R4Q99570 1358 aa21.47■■□□□ 1.03
LINC00854-213ENST00000608223 AMOTL2Q9Y2J4 779 aa21.46■■□□□ 1.03
LINC00854-213ENST00000608223 CLTCL1P53675 1640 aa21.46■■□□□ 1.03
LINC00854-213ENST00000608223 KIF1BO60333 1816 aa21.45■■□□□ 1.03
LINC00854-213ENST00000608223 TRIM52Q96A61 297 aa21.45■■□□□ 1.02
LINC00854-213ENST00000608223 PHLPP1O60346 1717 aa21.45■■□□□ 1.02
LINC00854-213ENST00000608223 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.45■■□□□ 1.02
LINC00854-213ENST00000608223 NCOA3Q9Y6Q9 1424 aa21.45■■□□□ 1.02
LINC00854-213ENST00000608223 NRXN3Q9Y4C0 1643 aa21.44■■□□□ 1.02
LINC00854-213ENST00000608223 PTPRUQ92729 1446 aa21.44■■□□□ 1.02
LINC00854-213ENST00000608223 SETBP1Q9Y6X0 1596 aa21.41■■□□□ 1.02
LINC00854-213ENST00000608223 C19orf44Q9H6X5 657 aa21.41■■□□□ 1.02
LINC00854-213ENST00000608223 RGS17Q9UGC6 210 aaPredicted RBP21.41■■□□□ 1.02
LINC00854-213ENST00000608223 HFM1A2PYH4 1435 aa21.4■■□□□ 1.02
LINC00854-213ENST00000608223 ATF3P18847 181 aa21.4■■□□□ 1.02
LINC00854-213ENST00000608223 CADPS2Q86UW7 1296 aa21.39■■□□□ 1.01
LINC00854-213ENST00000608223 NEXMIFQ5QGS0 1516 aa21.39■■□□□ 1.01
LINC00854-213ENST00000608223 XRN1Q8IZH2 1706 aaKnown RBP21.38■■□□□ 1.01
LINC00854-213ENST00000608223 SLC4A1APQ9BWU0 796 aaKnown RBP21.37■■□□□ 1.01
LINC00854-213ENST00000608223 METP08581 1390 aa21.36■■□□□ 1.01
LINC00854-213ENST00000608223 COL16A1Q07092 1604 aaPredicted RBP21.35■■□□□ 1.01
LINC00854-213ENST00000608223 JCADQ9P266 1359 aa21.34■■□□□ 1.01
LINC00854-213ENST00000608223 AHDC1Q5TGY3 1603 aaPredicted RBP21.29■■□□□ 1
LINC00854-213ENST00000608223 VGFO15240 615 aaPredicted RBP21.29■■□□□ 1
LINC00854-213ENST00000608223 FOXD1Q16676 465 aa21.29■■□□□ 1
LINC00854-213ENST00000608223 POTEAQ6S8J7 498 aa21.29■■□□□ 1
LINC00854-213ENST00000608223 BRINP3Q76B58 766 aa21.28■■□□□ 1
LINC00854-213ENST00000608223 DCCP43146 1447 aa21.28■■□□□ 1
LINC00854-213ENST00000608223 PPLO60437 1756 aa21.27■■□□□ 1
LINC00854-213ENST00000608223 SETD1AO15047 1707 aaKnown RBP21.26■□□□□ 0.99
LINC00854-213ENST00000608223 NALCNQ8IZF0 1738 aa21.26■□□□□ 0.99
LINC00854-213ENST00000608223 RPGRIP1LQ68CZ1 1315 aa21.26■□□□□ 0.99
LINC00854-213ENST00000608223 MST1RQ04912 1400 aa21.25■□□□□ 0.99
LINC00854-213ENST00000608223 SHPRHQ149N8 1683 aa21.24■□□□□ 0.99
LINC00854-213ENST00000608223 ADGRL3Q9HAR2 1447 aa21.23■□□□□ 0.99
LINC00854-213ENST00000608223 ASXL1Q8IXJ9 1541 aa21.23■□□□□ 0.99
LINC00854-213ENST00000608223 SPATA31A6Q5VVP1 1343 aa21.23■□□□□ 0.99
LINC00854-213ENST00000608223 LRP6O75581 1613 aa21.22■□□□□ 0.99
LINC00854-213ENST00000608223 MEX3CQ5U5Q3 659 aaKnown RBP21.21■□□□□ 0.99
LINC00854-213ENST00000608223 MPHOSPH9Q99550 1183 aa21.21■□□□□ 0.99
LINC00854-213ENST00000608223 NHSL1Q5SYE7 1610 aa21.2■□□□□ 0.98
LINC00854-213ENST00000608223 RGL3Q3MIN7 710 aa21.19■□□□□ 0.98
LINC00854-213ENST00000608223 CCDC144AA2RUR9 1427 aa21.19■□□□□ 0.98
LINC00854-213ENST00000608223 DDX17Q92841 729 aaKnown RBP21.18■□□□□ 0.98
LINC00854-213ENST00000608223 ROBO2Q9HCK4 1378 aa21.18■□□□□ 0.98
LINC00854-213ENST00000608223 NUTM2BA6NNL0 878 aaPredicted RBP21.17■□□□□ 0.98
LINC00854-213ENST00000608223 NUTM2EB1AL46 878 aaPredicted RBP21.17■□□□□ 0.98
LINC00854-213ENST00000608223 NUTM2AQ8IVF1 878 aaPredicted RBP21.17■□□□□ 0.98
LINC00854-213ENST00000608223 PTCH1Q13635 1447 aa21.17■□□□□ 0.98
LINC00854-213ENST00000608223 ADGRF5Q8IZF2 1346 aa21.15■□□□□ 0.98
LINC00854-213ENST00000608223 SETD5Q9C0A6 1442 aa21.14■□□□□ 0.98
LINC00854-213ENST00000608223 LRRC59Q96AG4 307 aaKnown RBP21.14■□□□□ 0.97
LINC00854-213ENST00000608223 IFT172Q9UG01 1749 aa21.14■□□□□ 0.97
LINC00854-213ENST00000608223 C1orf167Q5SNV9 1468 aa21.13■□□□□ 0.97
LINC00854-213ENST00000608223 SPATA31E1Q6ZUB1 1445 aa21.12■□□□□ 0.97
LINC00854-213ENST00000608223 ZNF772Q68DY9 489 aaPredicted RBP21.12■□□□□ 0.97
LINC00854-213ENST00000608223 ORAI2Q96SN7 254 aa21.1■□□□□ 0.97
LINC00854-213ENST00000608223 PRAG1Q86YV5 1406 aa21.1■□□□□ 0.97
LINC00854-213ENST00000608223 STK26Q9P289 416 aa21.09■□□□□ 0.97
LINC00854-213ENST00000608223 ANKRD30BQ9BXX2 1392 aa21.09■□□□□ 0.97
LINC00854-213ENST00000608223 PNPLA6Q8IY17 1366 aa21.07■□□□□ 0.96
LINC00854-213ENST00000608223 TMEM132EQ6IEE7 984 aa21.06■□□□□ 0.96
LINC00854-213ENST00000608223 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
LINC00854-213ENST00000608223 LAMC1P11047 1609 aa21.05■□□□□ 0.96
LINC00854-213ENST00000608223 WAPLQ7Z5K2 1190 aa21.05■□□□□ 0.96
LINC00854-213ENST00000608223 AFF2P51816 1311 aa21.04■□□□□ 0.96
LINC00854-213ENST00000608223 PIK3C2GO75747 1445 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms