RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 RIMS2Q9UQ26 1411 aa20.86■□□□□ 0.93
CTSA-219ENST00000607841 MED14O60244 1454 aa20.85■□□□□ 0.93
CTSA-219ENST00000607841 NPHP4O75161 1426 aaPredicted RBP20.85■□□□□ 0.93
CTSA-219ENST00000607841 RPGRIP1LQ68CZ1 1315 aa20.83■□□□□ 0.93
CTSA-219ENST00000607841 ZFYVE9O95405 1425 aa20.83■□□□□ 0.93
CTSA-219ENST00000607841 BCANQ96GW7 911 aa20.81■□□□□ 0.92
CTSA-219ENST00000607841 POLR1AO95602 1720 aaPredicted RBP20.8■□□□□ 0.92
CTSA-219ENST00000607841 NEURL4Q96JN8 1562 aa20.8■□□□□ 0.92
CTSA-219ENST00000607841 RGL3Q3MIN7 710 aa20.79■□□□□ 0.92
CTSA-219ENST00000607841 NUTM2DQ5VT03 806 aaPredicted RBP20.79■□□□□ 0.92
CTSA-219ENST00000607841 DHX57Q6P158 1386 aaKnown RBP20.79■□□□□ 0.92
CTSA-219ENST00000607841 KIF1BO60333 1816 aa20.78■□□□□ 0.92
CTSA-219ENST00000607841 PLEKHG1Q9ULL1 1385 aa20.78■□□□□ 0.92
CTSA-219ENST00000607841 VGFO15240 615 aaPredicted RBP20.78■□□□□ 0.92
CTSA-219ENST00000607841 SPATA31E1Q6ZUB1 1445 aa20.78■□□□□ 0.92
CTSA-219ENST00000607841 IQGAP1P46940 1657 aa20.74■□□□□ 0.91
CTSA-219ENST00000607841 MYO5BQ9ULV0 1848 aa20.74■□□□□ 0.91
CTSA-219ENST00000607841 SLC26A8Q96RN1 970 aa20.73■□□□□ 0.91
CTSA-219ENST00000607841 NEXMIFQ5QGS0 1516 aa20.73■□□□□ 0.91
CTSA-219ENST00000607841 TBX22Q9Y458 520 aa20.71■□□□□ 0.91
CTSA-219ENST00000607841 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
CTSA-219ENST00000607841 ZNF335Q9H4Z2 1342 aaPredicted RBP20.7■□□□□ 0.9
CTSA-219ENST00000607841 STAC3Q96MF2 364 aa20.69■□□□□ 0.9
CTSA-219ENST00000607841 ADAMTS13Q76LX8 1427 aa20.65■□□□□ 0.9
CTSA-219ENST00000607841 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
CTSA-219ENST00000607841 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
CTSA-219ENST00000607841 ADGRF5Q8IZF2 1346 aa20.64■□□□□ 0.89
CTSA-219ENST00000607841 KCNA6P17658 529 aa20.64■□□□□ 0.89
CTSA-219ENST00000607841 DCAF11Q8TEB1 546 aa20.64■□□□□ 0.89
CTSA-219ENST00000607841 SETBP1Q9Y6X0 1596 aa20.63■□□□□ 0.89
CTSA-219ENST00000607841 PIK3R4Q99570 1358 aa20.63■□□□□ 0.89
CTSA-219ENST00000607841 DIP2AQ14689 1571 aa20.63■□□□□ 0.89
CTSA-219ENST00000607841 CERKQ8TCT0 537 aa20.61■□□□□ 0.89
CTSA-219ENST00000607841 KDM2AQ9Y2K7 1162 aa20.61■□□□□ 0.89
CTSA-219ENST00000607841 PPLO60437 1756 aa20.61■□□□□ 0.89
CTSA-219ENST00000607841 MYOM2P54296 1465 aa20.61■□□□□ 0.89
CTSA-219ENST00000607841 CPS1P31327 1500 aa20.6■□□□□ 0.89
CTSA-219ENST00000607841 LTBP4Q8N2S1 1624 aa20.6■□□□□ 0.89
CTSA-219ENST00000607841 CLSPNQ9HAW4 1339 aa20.59■□□□□ 0.89
CTSA-219ENST00000607841 PIK3C2GO75747 1445 aa20.57■□□□□ 0.88
CTSA-219ENST00000607841 IFT172Q9UG01 1749 aa20.56■□□□□ 0.88
CTSA-219ENST00000607841 CCER1Q8TC90 406 aaPredicted RBP20.56■□□□□ 0.88
CTSA-219ENST00000607841 L3MBTL2Q969R5 705 aa20.56■□□□□ 0.88
CTSA-219ENST00000607841 AMOTL2Q9Y2J4 779 aa20.56■□□□□ 0.88
CTSA-219ENST00000607841 METP08581 1390 aa20.56■□□□□ 0.88
CTSA-219ENST00000607841 NRXN3Q9Y4C0 1643 aa20.56■□□□□ 0.88
CTSA-219ENST00000607841 NRXN1Q9ULB1 1477 aa20.56■□□□□ 0.88
CTSA-219ENST00000607841 C14orf93Q9H972 538 aaKnown RBP20.55■□□□□ 0.88
CTSA-219ENST00000607841 ALKQ9UM73 1620 aa20.54■□□□□ 0.88
CTSA-219ENST00000607841 PROSER2Q86WR7 435 aaPredicted RBP20.53■□□□□ 0.88
CTSA-219ENST00000607841 TONSLQ96HA7 1378 aa20.53■□□□□ 0.88
CTSA-219ENST00000607841 NKTRP30414 1462 aaKnown RBP20.52■□□□□ 0.88
CTSA-219ENST00000607841 IQSEC2Q5JU85 1478 aa20.52■□□□□ 0.88
CTSA-219ENST00000607841 CFAP70Q5T0N1 1121 aa20.52■□□□□ 0.88
CTSA-219ENST00000607841 NWD1Q149M9 1564 aa20.51■□□□□ 0.87
CTSA-219ENST00000607841 LRRC7Q96NW7 1537 aa20.5■□□□□ 0.87
CTSA-219ENST00000607841 PTPRUQ92729 1446 aa20.5■□□□□ 0.87
CTSA-219ENST00000607841 TMEM94Q12767 1356 aa20.47■□□□□ 0.87
CTSA-219ENST00000607841 TMEM132EQ6IEE7 984 aa20.47■□□□□ 0.87
CTSA-219ENST00000607841 CHD2O14647 1828 aaKnown RBP20.47■□□□□ 0.87
CTSA-219ENST00000607841 TIMELESSQ9UNS1 1208 aa20.46■□□□□ 0.87
CTSA-219ENST00000607841 STRCP1A6NGW2 1772 aa20.46■□□□□ 0.87
CTSA-219ENST00000607841 PRAG1Q86YV5 1406 aa20.45■□□□□ 0.86
CTSA-219ENST00000607841 NCOA3Q9Y6Q9 1424 aa20.45■□□□□ 0.86
CTSA-219ENST00000607841 LAMC1P11047 1609 aa20.45■□□□□ 0.86
CTSA-219ENST00000607841 LRPPRCP42704 1394 aaKnown RBP20.45■□□□□ 0.86
CTSA-219ENST00000607841 C14orf37Q86TY3 774 aa20.44■□□□□ 0.86
CTSA-219ENST00000607841 STK26Q9P289 416 aa20.44■□□□□ 0.86
CTSA-219ENST00000607841 ABCC11Q96J66 1382 aa20.44■□□□□ 0.86
CTSA-219ENST00000607841 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
CTSA-219ENST00000607841 SETD1AO15047 1707 aaKnown RBP20.43■□□□□ 0.86
CTSA-219ENST00000607841 TOM1O60784 492 aa20.42■□□□□ 0.86
CTSA-219ENST00000607841 PTCH1Q13635 1447 aa20.42■□□□□ 0.86
CTSA-219ENST00000607841 YTHDC2Q9H6S0 1430 aaKnown RBP20.42■□□□□ 0.86
CTSA-219ENST00000607841 SIRT1Q96EB6 747 aa20.41■□□□□ 0.86
CTSA-219ENST00000607841 XRN1Q8IZH2 1706 aaKnown RBP20.41■□□□□ 0.86
CTSA-219ENST00000607841 UBAP1LF5GYI3 381 aa20.4■□□□□ 0.86
CTSA-219ENST00000607841 MSH6P52701 1360 aa20.4■□□□□ 0.86
CTSA-219ENST00000607841 DISP3Q9P2K9 1392 aa20.4■□□□□ 0.86
CTSA-219ENST00000607841 TECPR2O15040 1411 aa20.39■□□□□ 0.85
CTSA-219ENST00000607841 ROBO2Q9HCK4 1378 aa20.39■□□□□ 0.85
CTSA-219ENST00000607841 C19orf44Q9H6X5 657 aa20.39■□□□□ 0.85
CTSA-219ENST00000607841 ASXL1Q8IXJ9 1541 aa20.38■□□□□ 0.85
CTSA-219ENST00000607841 ADGRB1O14514 1584 aa20.37■□□□□ 0.85
CTSA-219ENST00000607841 TRAK1Q9UPV9 953 aa20.36■□□□□ 0.85
CTSA-219ENST00000607841 ATF3P18847 181 aa20.35■□□□□ 0.85
CTSA-219ENST00000607841 NBPF1Q3BBV0 1214 aa20.35■□□□□ 0.85
CTSA-219ENST00000607841 CADPS2Q86UW7 1296 aa20.35■□□□□ 0.85
CTSA-219ENST00000607841 FAM135BQ49AJ0 1406 aa20.35■□□□□ 0.85
CTSA-219ENST00000607841 KIAA1210Q9ULL0 1709 aa20.34■□□□□ 0.85
CTSA-219ENST00000607841 NBPF8Q3BBV2 869 aa20.34■□□□□ 0.85
CTSA-219ENST00000607841 WAPLQ7Z5K2 1190 aa20.34■□□□□ 0.85
CTSA-219ENST00000607841 POGKQ9P215 609 aa20.34■□□□□ 0.85
CTSA-219ENST00000607841 ROCK2O75116 1388 aaKnown RBP20.33■□□□□ 0.84
CTSA-219ENST00000607841 SOCS7O14512 581 aa20.32■□□□□ 0.84
CTSA-219ENST00000607841 PRAM1Q96QH2 718 aa20.32■□□□□ 0.84
CTSA-219ENST00000607841 DLC1Q96QB1 1528 aa20.32■□□□□ 0.84
CTSA-219ENST00000607841 ADGRL3Q9HAR2 1447 aa20.31■□□□□ 0.84
CTSA-219ENST00000607841 ILDR2Q71H61 639 aa20.31■□□□□ 0.84
CTSA-219ENST00000607841 DCCP43146 1447 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms