RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 IQGAP1P46940 1657 aa15.06■□□□□ 0
CTSA-215ENST00000607187 FBXO41Q8TF61 875 aa15.06■□□□□ 0
CTSA-215ENST00000607187 SLC52A1Q9NWF4 448 aa15.06■□□□□ 0
CTSA-215ENST00000607187 ATF5Q9Y2D1 282 aaPredicted RBP15.06■□□□□ 0
CTSA-215ENST00000607187 MYO5BQ9ULV0 1848 aa15.05■□□□□ -0
CTSA-215ENST00000607187 ADGRB3O60242 1522 aa15.04■□□□□ -0
CTSA-215ENST00000607187 NPHP4O75161 1426 aaPredicted RBP15.04■□□□□ -0
CTSA-215ENST00000607187 ZNF335Q9H4Z2 1342 aaPredicted RBP15.04■□□□□ -0
CTSA-215ENST00000607187 SCAF11Q99590 1463 aaKnown RBP15.03■□□□□ -0
CTSA-215ENST00000607187 TMEM2Q9UHN6 1383 aa15.03■□□□□ -0
CTSA-215ENST00000607187 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
CTSA-215ENST00000607187 LTKP29376 864 aa15.02■□□□□ -0
CTSA-215ENST00000607187 SPHKAPQ2M3C7 1700 aa15.01□□□□□ -0.01
CTSA-215ENST00000607187 TXNDC2Q86VQ3 553 aa15.01□□□□□ -0.01
CTSA-215ENST00000607187 TMEM131LA2VDJ0 1609 aa15.01□□□□□ -0.01
CTSA-215ENST00000607187 EID1Q9Y6B2 187 aa15□□□□□ -0.01
CTSA-215ENST00000607187 IQSEC2Q5JU85 1478 aa14.99□□□□□ -0.01
CTSA-215ENST00000607187 STRCP1A6NGW2 1772 aa14.96□□□□□ -0.01
CTSA-215ENST00000607187 TRIM52Q96A61 297 aa14.96□□□□□ -0.01
CTSA-215ENST00000607187 CPS1P31327 1500 aa14.96□□□□□ -0.02
CTSA-215ENST00000607187 ZFYVE9O95405 1425 aa14.95□□□□□ -0.02
CTSA-215ENST00000607187 TRPM2O94759 1503 aa14.93□□□□□ -0.02
CTSA-215ENST00000607187 RIMS2Q9UQ26 1411 aa14.92□□□□□ -0.02
CTSA-215ENST00000607187 CHGAP10645 457 aaKnown RBP14.92□□□□□ -0.02
CTSA-215ENST00000607187 KIF1BO60333 1816 aa14.92□□□□□ -0.02
CTSA-215ENST00000607187 CLTCL1P53675 1640 aa14.92□□□□□ -0.02
CTSA-215ENST00000607187 SETD5Q9C0A6 1442 aa14.92□□□□□ -0.02
CTSA-215ENST00000607187 HDGFP51858 240 aaKnown RBP14.91□□□□□ -0.02
CTSA-215ENST00000607187 PLEKHG1Q9ULL1 1385 aa14.89□□□□□ -0.03
CTSA-215ENST00000607187 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTSA-215ENST00000607187 ACIN1Q9UKV3 1341 aaKnown RBP14.89□□□□□ -0.03
CTSA-215ENST00000607187 PPP1R15AO75807 674 aaPredicted RBP14.87□□□□□ -0.03
CTSA-215ENST00000607187 SLC26A8Q96RN1 970 aa14.87□□□□□ -0.03
CTSA-215ENST00000607187 LRRC7Q96NW7 1537 aa14.87□□□□□ -0.03
CTSA-215ENST00000607187 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
CTSA-215ENST00000607187 MPHOSPH9Q99550 1183 aa14.86□□□□□ -0.03
CTSA-215ENST00000607187 CHD2O14647 1828 aaKnown RBP14.86□□□□□ -0.03
CTSA-215ENST00000607187 XIRP1Q702N8 1843 aaKnown RBP14.86□□□□□ -0.03
CTSA-215ENST00000607187 RAB3GAP2Q9H2M9 1393 aa14.85□□□□□ -0.03
CTSA-215ENST00000607187 NUTM2DQ5VT03 806 aaPredicted RBP14.85□□□□□ -0.03
CTSA-215ENST00000607187 BCANQ96GW7 911 aa14.85□□□□□ -0.03
CTSA-215ENST00000607187 UBAP1LF5GYI3 381 aa14.84□□□□□ -0.03
CTSA-215ENST00000607187 NWD1Q149M9 1564 aa14.84□□□□□ -0.03
CTSA-215ENST00000607187 DIP2AQ14689 1571 aa14.83□□□□□ -0.04
CTSA-215ENST00000607187 KCNA6P17658 529 aa14.83□□□□□ -0.04
CTSA-215ENST00000607187 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.04
CTSA-215ENST00000607187 NEXMIFQ5QGS0 1516 aa14.82□□□□□ -0.04
CTSA-215ENST00000607187 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
CTSA-215ENST00000607187 TBX22Q9Y458 520 aa14.82□□□□□ -0.04
CTSA-215ENST00000607187 NRXN3Q9Y4C0 1643 aa14.81□□□□□ -0.04
CTSA-215ENST00000607187 SETBP1Q9Y6X0 1596 aa14.81□□□□□ -0.04
CTSA-215ENST00000607187 ALKQ9UM73 1620 aa14.81□□□□□ -0.04
CTSA-215ENST00000607187 TOM1O60784 492 aa14.8□□□□□ -0.04
CTSA-215ENST00000607187 NKTRP30414 1462 aaKnown RBP14.8□□□□□ -0.04
CTSA-215ENST00000607187 CCDC144AA2RUR9 1427 aa14.79□□□□□ -0.04
CTSA-215ENST00000607187 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
CTSA-215ENST00000607187 PPLO60437 1756 aa14.79□□□□□ -0.04
CTSA-215ENST00000607187 HRCP23327 699 aa14.79□□□□□ -0.04
CTSA-215ENST00000607187 PIK3R4Q99570 1358 aa14.78□□□□□ -0.04
CTSA-215ENST00000607187 TMEM94Q12767 1356 aa14.77□□□□□ -0.04
CTSA-215ENST00000607187 RPGRIP1LQ68CZ1 1315 aa14.77□□□□□ -0.04
CTSA-215ENST00000607187 PROSER2Q86WR7 435 aaPredicted RBP14.76□□□□□ -0.05
CTSA-215ENST00000607187 SPATA31E1Q6ZUB1 1445 aa14.75□□□□□ -0.05
CTSA-215ENST00000607187 VGFO15240 615 aaPredicted RBP14.75□□□□□ -0.05
CTSA-215ENST00000607187 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
CTSA-215ENST00000607187 IFT172Q9UG01 1749 aa14.75□□□□□ -0.05
CTSA-215ENST00000607187 PIP4K2BP78356 416 aa14.74□□□□□ -0.05
CTSA-215ENST00000607187 SETD1AO15047 1707 aaKnown RBP14.73□□□□□ -0.05
CTSA-215ENST00000607187 XRN1Q8IZH2 1706 aaKnown RBP14.73□□□□□ -0.05
CTSA-215ENST00000607187 PLCB2Q00722 1185 aa14.73□□□□□ -0.05
CTSA-215ENST00000607187 RBM33Q96EV2 1170 aaKnown RBP14.73□□□□□ -0.05
CTSA-215ENST00000607187 PTPRUQ92729 1446 aa14.73□□□□□ -0.05
CTSA-215ENST00000607187 METP08581 1390 aa14.72□□□□□ -0.05
CTSA-215ENST00000607187 RGL3Q3MIN7 710 aa14.71□□□□□ -0.05
CTSA-215ENST00000607187 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
CTSA-215ENST00000607187 AMOTL2Q9Y2J4 779 aa14.71□□□□□ -0.05
CTSA-215ENST00000607187 NCOA3Q9Y6Q9 1424 aa14.71□□□□□ -0.05
CTSA-215ENST00000607187 ANKRD30BQ9BXX2 1392 aa14.7□□□□□ -0.06
CTSA-215ENST00000607187 MSH6P52701 1360 aa14.69□□□□□ -0.06
CTSA-215ENST00000607187 HSPA1LP34931 641 aa14.68□□□□□ -0.06
CTSA-215ENST00000607187 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.67□□□□□ -0.06
CTSA-215ENST00000607187 ADGRF5Q8IZF2 1346 aa14.66□□□□□ -0.06
CTSA-215ENST00000607187 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
CTSA-215ENST00000607187 FAM135BQ49AJ0 1406 aa14.65□□□□□ -0.06
CTSA-215ENST00000607187 C19orf44Q9H6X5 657 aa14.64□□□□□ -0.07
CTSA-215ENST00000607187 PIK3C2GO75747 1445 aa14.64□□□□□ -0.07
CTSA-215ENST00000607187 ROBO1Q9Y6N7 1651 aa14.64□□□□□ -0.07
CTSA-215ENST00000607187 C14orf37Q86TY3 774 aa14.63□□□□□ -0.07
CTSA-215ENST00000607187 PRAG1Q86YV5 1406 aa14.63□□□□□ -0.07
CTSA-215ENST00000607187 MYOM2P54296 1465 aa14.63□□□□□ -0.07
CTSA-215ENST00000607187 PTCH1Q13635 1447 aa14.62□□□□□ -0.07
CTSA-215ENST00000607187 SLAIN2Q9P270 581 aa14.62□□□□□ -0.07
CTSA-215ENST00000607187 NRXN1Q9ULB1 1477 aa14.62□□□□□ -0.07
CTSA-215ENST00000607187 NALCNQ8IZF0 1738 aa14.61□□□□□ -0.07
CTSA-215ENST00000607187 DCCP43146 1447 aa14.61□□□□□ -0.07
CTSA-215ENST00000607187 CADPS2Q86UW7 1296 aa14.61□□□□□ -0.07
CTSA-215ENST00000607187 ATF3P18847 181 aa14.6□□□□□ -0.07
CTSA-215ENST00000607187 ROBO2Q9HCK4 1378 aa14.6□□□□□ -0.07
CTSA-215ENST00000607187 LAMC1P11047 1609 aa14.59□□□□□ -0.07
CTSA-215ENST00000607187 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 345.5 ms