RNA–Protein interactions for RNA: ENST00000607093.1

LCE1C-202, Transcript of late cornified envelope 1C, humanhuman

APPRIS P2 BASIC

Gene LCE1C, Length 644 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE1C-202ENST00000607093 ANKRD50Q9ULJ7 1429 aa28.22■■■□□ 2.11
LCE1C-202ENST00000607093 RGS17Q9UGC6 210 aaPredicted RBP28.21■■■□□ 2.11
LCE1C-202ENST00000607093 BCANQ96GW7 911 aa28.19■■■□□ 2.1
LCE1C-202ENST00000607093 SLC52A1Q9NWF4 448 aa28.19■■■□□ 2.1
LCE1C-202ENST00000607093 NKTRP30414 1462 aaKnown RBP28.19■■■□□ 2.1
LCE1C-202ENST00000607093 RPRD2Q5VT52 1461 aaKnown RBP28.19■■■□□ 2.1
LCE1C-202ENST00000607093 CHD2O14647 1828 aaKnown RBP28.17■■■□□ 2.1
LCE1C-202ENST00000607093 TMEM131LA2VDJ0 1609 aa28.17■■■□□ 2.1
LCE1C-202ENST00000607093 ZFYVE9O95405 1425 aa28.17■■■□□ 2.1
LCE1C-202ENST00000607093 UNC13BO14795 1591 aa28.16■■■□□ 2.1
LCE1C-202ENST00000607093 E9PCH4 1651 aa28.13■■■□□ 2.09
LCE1C-202ENST00000607093 RIMS2Q9UQ26 1411 aa28.12■■■□□ 2.09
LCE1C-202ENST00000607093 PHLPP1O60346 1717 aa28.11■■■□□ 2.09
LCE1C-202ENST00000607093 PLEKHG1Q9ULL1 1385 aa28.11■■■□□ 2.09
LCE1C-202ENST00000607093 MSH6P52701 1360 aa28.1■■■□□ 2.09
LCE1C-202ENST00000607093 PPP1R15AO75807 674 aaPredicted RBP28.08■■■□□ 2.09
LCE1C-202ENST00000607093 CHGAP10645 457 aaKnown RBP28.06■■■□□ 2.08
LCE1C-202ENST00000607093 NUTM2DQ5VT03 806 aaPredicted RBP28.05■■■□□ 2.08
LCE1C-202ENST00000607093 IQGAP3Q86VI3 1631 aa28.04■■■□□ 2.08
LCE1C-202ENST00000607093 POTEAQ6S8J7 498 aa28.04■■■□□ 2.08
LCE1C-202ENST00000607093 SLAIN2Q9P270 581 aa28.02■■■□□ 2.08
LCE1C-202ENST00000607093 ADAMTS13Q76LX8 1427 aa28■■■□□ 2.07
LCE1C-202ENST00000607093 HDGFP51858 240 aaKnown RBP27.99■■■□□ 2.07
LCE1C-202ENST00000607093 COL16A1Q07092 1604 aaPredicted RBP27.99■■■□□ 2.07
LCE1C-202ENST00000607093 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.98■■■□□ 2.07
LCE1C-202ENST00000607093 TBX22Q9Y458 520 aa27.97■■■□□ 2.07
LCE1C-202ENST00000607093 SETD1AO15047 1707 aaKnown RBP27.97■■■□□ 2.07
LCE1C-202ENST00000607093 DIP2AQ14689 1571 aa27.96■■■□□ 2.07
LCE1C-202ENST00000607093 ROCK1Q13464 1354 aa27.96■■■□□ 2.07
LCE1C-202ENST00000607093 C14orf37Q86TY3 774 aa27.94■■■□□ 2.06
LCE1C-202ENST00000607093 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.94■■■□□ 2.06
LCE1C-202ENST00000607093 ITGAEP38570 1179 aa27.93■■■□□ 2.06
LCE1C-202ENST00000607093 JCADQ9P266 1359 aa27.93■■■□□ 2.06
LCE1C-202ENST00000607093 NUP155O75694 1391 aa27.91■■■□□ 2.06
LCE1C-202ENST00000607093 TRPM2O94759 1503 aa27.89■■■□□ 2.06
LCE1C-202ENST00000607093 NCOA3Q9Y6Q9 1424 aa27.89■■■□□ 2.06
LCE1C-202ENST00000607093 SPHKAPQ2M3C7 1700 aa27.88■■■□□ 2.05
LCE1C-202ENST00000607093 PTPRUQ92729 1446 aa27.88■■■□□ 2.05
LCE1C-202ENST00000607093 LRP6O75581 1613 aa27.88■■■□□ 2.05
LCE1C-202ENST00000607093 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
LCE1C-202ENST00000607093 NRXN3Q9Y4C0 1643 aa27.87■■■□□ 2.05
LCE1C-202ENST00000607093 PIK3R4Q99570 1358 aa27.86■■■□□ 2.05
LCE1C-202ENST00000607093 AHDC1Q5TGY3 1603 aaPredicted RBP27.85■■■□□ 2.05
LCE1C-202ENST00000607093 AMOTL2Q9Y2J4 779 aa27.83■■■□□ 2.05
LCE1C-202ENST00000607093 SHPRHQ149N8 1683 aa27.83■■■□□ 2.05
LCE1C-202ENST00000607093 XRN1Q8IZH2 1706 aaKnown RBP27.82■■■□□ 2.04
LCE1C-202ENST00000607093 ATF3P18847 181 aa27.82■■■□□ 2.04
LCE1C-202ENST00000607093 CADPS2Q86UW7 1296 aa27.82■■■□□ 2.04
LCE1C-202ENST00000607093 C19orf44Q9H6X5 657 aa27.82■■■□□ 2.04
LCE1C-202ENST00000607093 SETBP1Q9Y6X0 1596 aa27.78■■■□□ 2.04
LCE1C-202ENST00000607093 SPATA31A6Q5VVP1 1343 aa27.76■■■□□ 2.03
LCE1C-202ENST00000607093 CLTCL1P53675 1640 aa27.75■■■□□ 2.03
LCE1C-202ENST00000607093 MEX3CQ5U5Q3 659 aaKnown RBP27.75■■■□□ 2.03
LCE1C-202ENST00000607093 ZNF326Q5BKZ1 582 aaKnown RBP27.74■■■□□ 2.03
LCE1C-202ENST00000607093 BRINP3Q76B58 766 aa27.74■■■□□ 2.03
LCE1C-202ENST00000607093 ASXL1Q8IXJ9 1541 aa27.72■■■□□ 2.03
LCE1C-202ENST00000607093 METP08581 1390 aa27.71■■■□□ 2.03
LCE1C-202ENST00000607093 NHSL1Q5SYE7 1610 aa27.7■■■□□ 2.03
LCE1C-202ENST00000607093 DCCP43146 1447 aa27.7■■■□□ 2.03
LCE1C-202ENST00000607093 NEXMIFQ5QGS0 1516 aa27.7■■■□□ 2.02
LCE1C-202ENST00000607093 NALCNQ8IZF0 1738 aa27.7■■■□□ 2.02
LCE1C-202ENST00000607093 MST1RQ04912 1400 aa27.69■■■□□ 2.02
LCE1C-202ENST00000607093 KIF1BO60333 1816 aa27.69■■■□□ 2.02
LCE1C-202ENST00000607093 NUTM2BA6NNL0 878 aaPredicted RBP27.68■■■□□ 2.02
LCE1C-202ENST00000607093 NUTM2EB1AL46 878 aaPredicted RBP27.68■■■□□ 2.02
LCE1C-202ENST00000607093 NUTM2AQ8IVF1 878 aaPredicted RBP27.68■■■□□ 2.02
LCE1C-202ENST00000607093 TRIM52Q96A61 297 aa27.66■■■□□ 2.02
LCE1C-202ENST00000607093 ZNF772Q68DY9 489 aaPredicted RBP27.65■■■□□ 2.02
LCE1C-202ENST00000607093 ADGRL3Q9HAR2 1447 aa27.61■■■□□ 2.01
LCE1C-202ENST00000607093 DDX17Q92841 729 aaKnown RBP27.61■■■□□ 2.01
LCE1C-202ENST00000607093 SETD5Q9C0A6 1442 aa27.6■■■□□ 2.01
LCE1C-202ENST00000607093 NAIPQ13075 1403 aa27.58■■■□□ 2
LCE1C-202ENST00000607093 AFF2P51816 1311 aa27.56■■■□□ 2
LCE1C-202ENST00000607093 RRBP1Q9P2E9 1410 aaKnown RBP27.56■■■□□ 2
LCE1C-202ENST00000607093 UPF1Q92900 1129 aaKnown RBP eCLIP27.55■■■□□ 2
LCE1C-202ENST00000607093 RXRBP28702 533 aa27.54■■■□□ 2
LCE1C-202ENST00000607093 PNPLA6Q8IY17 1366 aa27.52■■■□□ 2
LCE1C-202ENST00000607093 LRRC59Q96AG4 307 aaKnown RBP27.51■■□□□ 1.99
LCE1C-202ENST00000607093 PPLO60437 1756 aa27.5■■□□□ 1.99
LCE1C-202ENST00000607093 C1orf167Q5SNV9 1468 aa27.5■■□□□ 1.99
LCE1C-202ENST00000607093 ROBO2Q9HCK4 1378 aa27.48■■□□□ 1.99
LCE1C-202ENST00000607093 C8orf37Q96NL8 207 aa27.48■■□□□ 1.99
LCE1C-202ENST00000607093 PTCH1Q13635 1447 aa27.48■■□□□ 1.99
LCE1C-202ENST00000607093 CDK12Q9NYV4 1490 aaPredicted RBP27.47■■□□□ 1.99
LCE1C-202ENST00000607093 LAMC1P11047 1609 aa27.47■■□□□ 1.99
LCE1C-202ENST00000607093 RGS12O14924 1447 aa27.43■■□□□ 1.98
LCE1C-202ENST00000607093 VGFO15240 615 aaPredicted RBP27.43■■□□□ 1.98
LCE1C-202ENST00000607093 ORAI2Q96SN7 254 aa27.43■■□□□ 1.98
LCE1C-202ENST00000607093 HFM1A2PYH4 1435 aa27.41■■□□□ 1.98
LCE1C-202ENST00000607093 ADAMTS2O95450 1211 aa27.41■■□□□ 1.98
LCE1C-202ENST00000607093 QTRT2Q9H974 415 aaKnown RBP27.4■■□□□ 1.98
LCE1C-202ENST00000607093 SLC4A1APQ9BWU0 796 aaKnown RBP27.39■■□□□ 1.98
LCE1C-202ENST00000607093 PRAG1Q86YV5 1406 aa27.37■■□□□ 1.97
LCE1C-202ENST00000607093 SOS2Q07890 1332 aaPredicted RBP27.37■■□□□ 1.97
LCE1C-202ENST00000607093 FOXD1Q16676 465 aa27.36■■□□□ 1.97
LCE1C-202ENST00000607093 RPGRIP1LQ68CZ1 1315 aa27.36■■□□□ 1.97
LCE1C-202ENST00000607093 RBM6P78332 1123 aaKnown RBP27.35■■□□□ 1.97
LCE1C-202ENST00000607093 NGLY1Q96IV0 654 aa27.35■■□□□ 1.97
LCE1C-202ENST00000607093 COL22A1Q8NFW1 1626 aaPredicted RBP27.33■■□□□ 1.97
LCE1C-202ENST00000607093 CDC42BPGQ6DT37 1551 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms