RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 CEBPAP49715 358 aaPredicted RBP23.63■■□□□ 1.37
PMF1-206ENST00000606952 RGL3Q3MIN7 710 aa23.63■■□□□ 1.37
PMF1-206ENST00000606952 LAMC1P11047 1609 aa23.62■■□□□ 1.37
PMF1-206ENST00000606952 NBPF8Q3BBV2 869 aa23.62■■□□□ 1.37
PMF1-206ENST00000606952 CEP170BQ9Y4F5 1589 aaPredicted RBP23.59■■□□□ 1.37
PMF1-206ENST00000606952 GPRASP1Q5JY77 1395 aa23.57■■□□□ 1.36
PMF1-206ENST00000606952 KDM4FA0A1W2PPD8 638 aa23.57■■□□□ 1.36
PMF1-206ENST00000606952 PIK3C2GO75747 1445 aa23.57■■□□□ 1.36
PMF1-206ENST00000606952 SLIT1O75093 1534 aa23.56■■□□□ 1.36
PMF1-206ENST00000606952 ARHGAP23Q9P227 1491 aa23.56■■□□□ 1.36
PMF1-206ENST00000606952 CHGAP10645 457 aaKnown RBP23.55■■□□□ 1.36
PMF1-206ENST00000606952 KDM2AQ9Y2K7 1162 aa23.54■■□□□ 1.36
PMF1-206ENST00000606952 ZNF326Q5BKZ1 582 aaKnown RBP23.53■■□□□ 1.36
PMF1-206ENST00000606952 SETBP1Q9Y6X0 1596 aa23.52■■□□□ 1.36
PMF1-206ENST00000606952 RIMS2Q9UQ26 1411 aa23.52■■□□□ 1.36
PMF1-206ENST00000606952 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
PMF1-206ENST00000606952 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
PMF1-206ENST00000606952 ADGRF5Q8IZF2 1346 aa23.51■■□□□ 1.35
PMF1-206ENST00000606952 VGFO15240 615 aaPredicted RBP23.5■■□□□ 1.35
PMF1-206ENST00000606952 STAG3Q9UJ98 1225 aa23.49■■□□□ 1.35
PMF1-206ENST00000606952 IQGAP1P46940 1657 aa23.47■■□□□ 1.35
PMF1-206ENST00000606952 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
PMF1-206ENST00000606952 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.46■■□□□ 1.35
PMF1-206ENST00000606952 NRXN3Q9Y4C0 1643 aa23.46■■□□□ 1.35
PMF1-206ENST00000606952 ADGRB1O14514 1584 aa23.45■■□□□ 1.34
PMF1-206ENST00000606952 ROCK2O75116 1388 aaKnown RBP23.44■■□□□ 1.34
PMF1-206ENST00000606952 HDGFP51858 240 aaKnown RBP23.42■■□□□ 1.34
PMF1-206ENST00000606952 THEMISQ8N1K5 641 aaPredicted RBP23.42■■□□□ 1.34
PMF1-206ENST00000606952 C14orf93Q9H972 538 aaKnown RBP23.42■■□□□ 1.34
PMF1-206ENST00000606952 ALKQ9UM73 1620 aa23.41■■□□□ 1.34
PMF1-206ENST00000606952 ASXL1Q8IXJ9 1541 aa23.4■■□□□ 1.34
PMF1-206ENST00000606952 PLEKHG1Q9ULL1 1385 aa23.39■■□□□ 1.33
PMF1-206ENST00000606952 NBPF1Q3BBV0 1214 aa23.38■■□□□ 1.33
PMF1-206ENST00000606952 USP47Q96K76 1375 aa23.38■■□□□ 1.33
PMF1-206ENST00000606952 SCAF11Q99590 1463 aaKnown RBP23.37■■□□□ 1.33
PMF1-206ENST00000606952 EIF4G2P78344 907 aaKnown RBP eCLIP23.37■■□□□ 1.33
PMF1-206ENST00000606952 CARD11Q9BXL7 1154 aa23.37■■□□□ 1.33
PMF1-206ENST00000606952 DIP2AQ14689 1571 aa23.36■■□□□ 1.33
PMF1-206ENST00000606952 ZNF316A6NFI3 1004 aaPredicted RBP23.36■■□□□ 1.33
PMF1-206ENST00000606952 CFAP70Q5T0N1 1121 aa23.36■■□□□ 1.33
PMF1-206ENST00000606952 MED14O60244 1454 aa23.36■■□□□ 1.33
PMF1-206ENST00000606952 POLR1AO95602 1720 aaPredicted RBP23.35■■□□□ 1.33
PMF1-206ENST00000606952 ADAMTS13Q76LX8 1427 aa23.33■■□□□ 1.32
PMF1-206ENST00000606952 HSPA5P11021 654 aaKnown RBP23.32■■□□□ 1.32
PMF1-206ENST00000606952 LTKP29376 864 aa23.32■■□□□ 1.32
PMF1-206ENST00000606952 NUTM2DQ5VT03 806 aaPredicted RBP23.32■■□□□ 1.32
PMF1-206ENST00000606952 KNDC1Q76NI1 1749 aa23.31■■□□□ 1.32
PMF1-206ENST00000606952 EID1Q9Y6B2 187 aa23.31■■□□□ 1.32
PMF1-206ENST00000606952 ARHGEF28Q8N1W1 1705 aaKnown RBP23.3■■□□□ 1.32
PMF1-206ENST00000606952 TXNDC2Q86VQ3 553 aa23.28■■□□□ 1.32
PMF1-206ENST00000606952 LMTK3Q96Q04 1460 aa23.28■■□□□ 1.32
PMF1-206ENST00000606952 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
PMF1-206ENST00000606952 EIF3AQ14152 1382 aaKnown RBP23.27■■□□□ 1.31
PMF1-206ENST00000606952 YTHDC2Q9H6S0 1430 aaKnown RBP23.25■■□□□ 1.31
PMF1-206ENST00000606952 TECPR2O15040 1411 aa23.24■■□□□ 1.31
PMF1-206ENST00000606952 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
PMF1-206ENST00000606952 LRPPRCP42704 1394 aaKnown RBP23.23■■□□□ 1.31
PMF1-206ENST00000606952 SBNO2Q9Y2G9 1366 aa23.23■■□□□ 1.31
PMF1-206ENST00000606952 CPS1P31327 1500 aa23.22■■□□□ 1.31
PMF1-206ENST00000606952 ABCC11Q96J66 1382 aa23.2■■□□□ 1.3
PMF1-206ENST00000606952 PIK3R4Q99570 1358 aa23.2■■□□□ 1.3
PMF1-206ENST00000606952 TBX22Q9Y458 520 aa23.2■■□□□ 1.3
PMF1-206ENST00000606952 QRICH2Q9H0J4 1663 aa23.19■■□□□ 1.3
PMF1-206ENST00000606952 METP08581 1390 aa23.19■■□□□ 1.3
PMF1-206ENST00000606952 ST20-MTHFSA0A0A6YYL1 179 aa23.19■■□□□ 1.3
PMF1-206ENST00000606952 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
PMF1-206ENST00000606952 NPHP4O75161 1426 aaPredicted RBP23.18■■□□□ 1.3
PMF1-206ENST00000606952 TMEM132EQ6IEE7 984 aa23.18■■□□□ 1.3
PMF1-206ENST00000606952 TESK2Q96S53 571 aa23.18■■□□□ 1.3
PMF1-206ENST00000606952 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
PMF1-206ENST00000606952 HIRIP3Q9BW71 556 aaPredicted RBP23.15■■□□□ 1.3
PMF1-206ENST00000606952 SIRT1Q96EB6 747 aa23.14■■□□□ 1.29
PMF1-206ENST00000606952 FAM135BQ49AJ0 1406 aa23.14■■□□□ 1.29
PMF1-206ENST00000606952 STRCQ7RTU9 1775 aa23.14■■□□□ 1.29
PMF1-206ENST00000606952 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
PMF1-206ENST00000606952 PTPRUQ92729 1446 aa23.13■■□□□ 1.29
PMF1-206ENST00000606952 CCDC7Q96M83 1385 aa23.13■■□□□ 1.29
PMF1-206ENST00000606952 CENPJQ9HC77 1338 aaPredicted RBP23.12■■□□□ 1.29
PMF1-206ENST00000606952 PTCH1Q13635 1447 aa23.12■■□□□ 1.29
PMF1-206ENST00000606952 NWD1Q149M9 1564 aa23.12■■□□□ 1.29
PMF1-206ENST00000606952 WASHC2AQ641Q2 1341 aa23.1■■□□□ 1.29
PMF1-206ENST00000606952 TRAK1Q9UPV9 953 aa23.1■■□□□ 1.29
PMF1-206ENST00000606952 C11orf95C9JLR9 678 aaPredicted RBP23.09■■□□□ 1.29
PMF1-206ENST00000606952 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.28
PMF1-206ENST00000606952 HSPA2P54652 639 aa23.07■■□□□ 1.28
PMF1-206ENST00000606952 BCANQ96GW7 911 aa23.07■■□□□ 1.28
PMF1-206ENST00000606952 SLC26A8Q96RN1 970 aa23.07■■□□□ 1.28
PMF1-206ENST00000606952 NCKAP5LQ9HCH0 1330 aa23.07■■□□□ 1.28
PMF1-206ENST00000606952 ADGRB2O60241 1585 aa23.06■■□□□ 1.28
PMF1-206ENST00000606952 DISP3Q9P2K9 1392 aa23.06■■□□□ 1.28
PMF1-206ENST00000606952 TULP4Q9NRJ4 1543 aa23.05■■□□□ 1.28
PMF1-206ENST00000606952 TMF1P82094 1093 aa23.04■■□□□ 1.28
PMF1-206ENST00000606952 SENP3Q9H4L4 574 aaPredicted RBP23.03■■□□□ 1.28
PMF1-206ENST00000606952 STK26Q9P289 416 aa23.03■■□□□ 1.28
PMF1-206ENST00000606952 ROBO2Q9HCK4 1378 aa23.02■■□□□ 1.28
PMF1-206ENST00000606952 PUS7Q96PZ0 661 aaKnown RBP23.02■■□□□ 1.28
PMF1-206ENST00000606952 MYOM1P52179 1685 aa23.02■■□□□ 1.28
PMF1-206ENST00000606952 AEBP2Q6ZN18 517 aaPredicted RBP23.01■■□□□ 1.27
PMF1-206ENST00000606952 PRAM1Q96QH2 718 aa23.01■■□□□ 1.27
PMF1-206ENST00000606952 CDCA8Q53HL2 280 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms