RNA–Protein interactions for RNA: ENST00000606873.1

SNAP47-212, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 2

Gene SNAP47, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-212ENST00000606873 ARHGAP23Q9P227 1491 aa18.17■□□□□ 0.5
SNAP47-212ENST00000606873 RIMS2Q9UQ26 1411 aa18.16■□□□□ 0.5
SNAP47-212ENST00000606873 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
SNAP47-212ENST00000606873 LTKP29376 864 aa18.14■□□□□ 0.49
SNAP47-212ENST00000606873 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
SNAP47-212ENST00000606873 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
SNAP47-212ENST00000606873 NUTM2DQ5VT03 806 aaPredicted RBP18.13■□□□□ 0.49
SNAP47-212ENST00000606873 ANKRD30BQ9BXX2 1392 aa18.13■□□□□ 0.49
SNAP47-212ENST00000606873 MED14O60244 1454 aa18.12■□□□□ 0.49
SNAP47-212ENST00000606873 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
SNAP47-212ENST00000606873 RPGRIP1LQ68CZ1 1315 aa18.11■□□□□ 0.49
SNAP47-212ENST00000606873 PPLO60437 1756 aa18.11■□□□□ 0.49
SNAP47-212ENST00000606873 ZFYVE9O95405 1425 aa18.09■□□□□ 0.49
SNAP47-212ENST00000606873 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
SNAP47-212ENST00000606873 DHX57Q6P158 1386 aaKnown RBP18.07■□□□□ 0.48
SNAP47-212ENST00000606873 NEXMIFQ5QGS0 1516 aa18.07■□□□□ 0.48
SNAP47-212ENST00000606873 PLEKHG1Q9ULL1 1385 aa18.06■□□□□ 0.48
SNAP47-212ENST00000606873 SLC26A8Q96RN1 970 aa18.05■□□□□ 0.48
SNAP47-212ENST00000606873 IFT172Q9UG01 1749 aa18.05■□□□□ 0.48
SNAP47-212ENST00000606873 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
SNAP47-212ENST00000606873 SPATA31E1Q6ZUB1 1445 aa18.04■□□□□ 0.48
SNAP47-212ENST00000606873 ZNF335Q9H4Z2 1342 aaPredicted RBP18■□□□□ 0.47
SNAP47-212ENST00000606873 DIP2AQ14689 1571 aa18■□□□□ 0.47
SNAP47-212ENST00000606873 DCAF11Q8TEB1 546 aa18■□□□□ 0.47
SNAP47-212ENST00000606873 KDM2AQ9Y2K7 1162 aa18■□□□□ 0.47
SNAP47-212ENST00000606873 TBX22Q9Y458 520 aa17.99■□□□□ 0.47
SNAP47-212ENST00000606873 CHD2O14647 1828 aaKnown RBP17.98■□□□□ 0.47
SNAP47-212ENST00000606873 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
SNAP47-212ENST00000606873 SETBP1Q9Y6X0 1596 aa17.97■□□□□ 0.47
SNAP47-212ENST00000606873 STAC3Q96MF2 364 aa17.97■□□□□ 0.47
SNAP47-212ENST00000606873 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
SNAP47-212ENST00000606873 CPS1P31327 1500 aa17.96■□□□□ 0.47
SNAP47-212ENST00000606873 KCNA6P17658 529 aa17.95■□□□□ 0.46
SNAP47-212ENST00000606873 ADGRF5Q8IZF2 1346 aa17.95■□□□□ 0.46
SNAP47-212ENST00000606873 NRXN3Q9Y4C0 1643 aa17.94■□□□□ 0.46
SNAP47-212ENST00000606873 STRCP1A6NGW2 1772 aa17.94■□□□□ 0.46
SNAP47-212ENST00000606873 ADAMTS13Q76LX8 1427 aa17.94■□□□□ 0.46
SNAP47-212ENST00000606873 MYOM2P54296 1465 aa17.94■□□□□ 0.46
SNAP47-212ENST00000606873 CERKQ8TCT0 537 aa17.93■□□□□ 0.46
SNAP47-212ENST00000606873 LTBP4Q8N2S1 1624 aa17.93■□□□□ 0.46
SNAP47-212ENST00000606873 ALKQ9UM73 1620 aa17.93■□□□□ 0.46
SNAP47-212ENST00000606873 TONSLQ96HA7 1378 aa17.92■□□□□ 0.46
SNAP47-212ENST00000606873 PIK3R4Q99570 1358 aa17.92■□□□□ 0.46
SNAP47-212ENST00000606873 LAMC1P11047 1609 aa17.92■□□□□ 0.46
SNAP47-212ENST00000606873 PROSER2Q86WR7 435 aaPredicted RBP17.9■□□□□ 0.46
SNAP47-212ENST00000606873 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
SNAP47-212ENST00000606873 CLSPNQ9HAW4 1339 aa17.89■□□□□ 0.45
SNAP47-212ENST00000606873 SETD1AO15047 1707 aaKnown RBP17.89■□□□□ 0.45
SNAP47-212ENST00000606873 NWD1Q149M9 1564 aa17.88■□□□□ 0.45
SNAP47-212ENST00000606873 C14orf37Q86TY3 774 aa17.88■□□□□ 0.45
SNAP47-212ENST00000606873 PIK3C2GO75747 1445 aa17.88■□□□□ 0.45
SNAP47-212ENST00000606873 L3MBTL2Q969R5 705 aa17.87■□□□□ 0.45
SNAP47-212ENST00000606873 NKTRP30414 1462 aaKnown RBP17.87■□□□□ 0.45
SNAP47-212ENST00000606873 METP08581 1390 aa17.86■□□□□ 0.45
SNAP47-212ENST00000606873 IQSEC2Q5JU85 1478 aa17.85■□□□□ 0.45
SNAP47-212ENST00000606873 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
SNAP47-212ENST00000606873 C14orf93Q9H972 538 aaKnown RBP17.85■□□□□ 0.45
SNAP47-212ENST00000606873 NRXN1Q9ULB1 1477 aa17.85■□□□□ 0.45
SNAP47-212ENST00000606873 LRRC7Q96NW7 1537 aa17.84■□□□□ 0.45
SNAP47-212ENST00000606873 STK26Q9P289 416 aa17.84■□□□□ 0.45
SNAP47-212ENST00000606873 XIRP1Q702N8 1843 aaKnown RBP17.84■□□□□ 0.45
SNAP47-212ENST00000606873 TMEM132EQ6IEE7 984 aa17.83■□□□□ 0.44
SNAP47-212ENST00000606873 XRN1Q8IZH2 1706 aaKnown RBP17.83■□□□□ 0.44
SNAP47-212ENST00000606873 KIAA1210Q9ULL0 1709 aa17.83■□□□□ 0.44
SNAP47-212ENST00000606873 PTPRUQ92729 1446 aa17.81■□□□□ 0.44
SNAP47-212ENST00000606873 TMEM94Q12767 1356 aa17.8■□□□□ 0.44
SNAP47-212ENST00000606873 TOM1O60784 492 aa17.8■□□□□ 0.44
SNAP47-212ENST00000606873 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
SNAP47-212ENST00000606873 KNDC1Q76NI1 1749 aa17.8■□□□□ 0.44
SNAP47-212ENST00000606873 UBAP1LF5GYI3 381 aa17.79■□□□□ 0.44
SNAP47-212ENST00000606873 PRAG1Q86YV5 1406 aa17.79■□□□□ 0.44
SNAP47-212ENST00000606873 MSH6P52701 1360 aa17.79■□□□□ 0.44
SNAP47-212ENST00000606873 YTHDC2Q9H6S0 1430 aaKnown RBP17.78■□□□□ 0.44
SNAP47-212ENST00000606873 LRPPRCP42704 1394 aaKnown RBP17.78■□□□□ 0.44
SNAP47-212ENST00000606873 TIMELESSQ9UNS1 1208 aa17.77■□□□□ 0.44
SNAP47-212ENST00000606873 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
SNAP47-212ENST00000606873 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
SNAP47-212ENST00000606873 FBXO41Q8TF61 875 aa17.75■□□□□ 0.43
SNAP47-212ENST00000606873 POGKQ9P215 609 aa17.75■□□□□ 0.43
SNAP47-212ENST00000606873 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
SNAP47-212ENST00000606873 ASXL1Q8IXJ9 1541 aa17.75■□□□□ 0.43
SNAP47-212ENST00000606873 TRPM1Q7Z4N2 1603 aa17.75■□□□□ 0.43
SNAP47-212ENST00000606873 PTCH1Q13635 1447 aa17.74■□□□□ 0.43
SNAP47-212ENST00000606873 ATF3P18847 181 aa17.74■□□□□ 0.43
SNAP47-212ENST00000606873 ABCC11Q96J66 1382 aa17.74■□□□□ 0.43
SNAP47-212ENST00000606873 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.73■□□□□ 0.43
SNAP47-212ENST00000606873 C19orf44Q9H6X5 657 aa17.73■□□□□ 0.43
SNAP47-212ENST00000606873 ROCK2O75116 1388 aaKnown RBP17.72■□□□□ 0.43
SNAP47-212ENST00000606873 PIP4K2BP78356 416 aa17.72■□□□□ 0.43
SNAP47-212ENST00000606873 ADGRB1O14514 1584 aa17.71■□□□□ 0.43
SNAP47-212ENST00000606873 ROBO2Q9HCK4 1378 aa17.71■□□□□ 0.43
SNAP47-212ENST00000606873 CADPS2Q86UW7 1296 aa17.71■□□□□ 0.43
SNAP47-212ENST00000606873 SIRT1Q96EB6 747 aa17.71■□□□□ 0.43
SNAP47-212ENST00000606873 NALCNQ8IZF0 1738 aa17.71■□□□□ 0.43
SNAP47-212ENST00000606873 TECPR2O15040 1411 aa17.71■□□□□ 0.43
SNAP47-212ENST00000606873 NBPF1Q3BBV0 1214 aa17.7■□□□□ 0.42
SNAP47-212ENST00000606873 WAPLQ7Z5K2 1190 aa17.7■□□□□ 0.42
SNAP47-212ENST00000606873 DLC1Q96QB1 1528 aa17.69■□□□□ 0.42
SNAP47-212ENST00000606873 SAFB2Q14151 953 aaKnown RBP eCLIP17.69■□□□□ 0.42
SNAP47-212ENST00000606873 PRAM1Q96QH2 718 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms