RNA–Protein interactions for RNA: ENST00000606671.5

ZEB1-225, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-225ENST00000606671 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
ZEB1-225ENST00000606671 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
ZEB1-225ENST00000606671 NBPF3Q9H094 633 aa8.63□□□□□ -1.03
ZEB1-225ENST00000606671 HRO43593 1189 aa8.62□□□□□ -1.03
ZEB1-225ENST00000606671 ANKRD13DQ6ZTN6 518 aa8.62□□□□□ -1.03
ZEB1-225ENST00000606671 SWT1Q5T5J6 900 aaKnown RBP8.61□□□□□ -1.03
ZEB1-225ENST00000606671 BEGAINQ9BUH8 593 aa8.61□□□□□ -1.03
ZEB1-225ENST00000606671 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
ZEB1-225ENST00000606671 LAPTM4BQ86VI4 370 aa8.6□□□□□ -1.03
ZEB1-225ENST00000606671 CD46P15529 392 aa8.59□□□□□ -1.03
ZEB1-225ENST00000606671 MRPL50Q8N5N7 158 aaKnown RBP8.59□□□□□ -1.03
ZEB1-225ENST00000606671 SAMD7Q7Z3H4 446 aa8.58□□□□□ -1.04
ZEB1-225ENST00000606671 SULF1Q8IWU6 871 aa8.58□□□□□ -1.04
ZEB1-225ENST00000606671 ZFRQ96KR1 1074 aaKnown RBP8.58□□□□□ -1.04
ZEB1-225ENST00000606671 SLC10A3P09131 477 aa8.56□□□□□ -1.04
ZEB1-225ENST00000606671 CDAN1Q8IWY9 1227 aa8.56□□□□□ -1.04
ZEB1-225ENST00000606671 RDH13Q8NBN7 331 aa8.55□□□□□ -1.04
ZEB1-225ENST00000606671 PLSCR2Q9NRY7 297 aa8.55□□□□□ -1.04
ZEB1-225ENST00000606671 HDGFP51858 240 aaKnown RBP8.54□□□□□ -1.04
ZEB1-225ENST00000606671 RNF40O75150 1001 aa8.53□□□□□ -1.04
ZEB1-225ENST00000606671 SH3D19Q5HYK7 790 aa8.53□□□□□ -1.04
ZEB1-225ENST00000606671 SLF2Q8IX21 1173 aa8.53□□□□□ -1.04
ZEB1-225ENST00000606671 TBC1D2Q9BYX2 928 aa8.53□□□□□ -1.04
ZEB1-225ENST00000606671 GTF3C3Q9Y5Q9 886 aa8.53□□□□□ -1.04
ZEB1-225ENST00000606671 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
ZEB1-225ENST00000606671 SPIRE2Q8WWL2 714 aa8.52□□□□□ -1.05
ZEB1-225ENST00000606671 STAC3Q96MF2 364 aa8.52□□□□□ -1.05
ZEB1-225ENST00000606671 GOPCQ9HD26 462 aa8.52□□□□□ -1.05
ZEB1-225ENST00000606671 LRCH3Q96II8 777 aa8.51□□□□□ -1.05
ZEB1-225ENST00000606671 GOLGA8CPA6NN73 597 aa8.5□□□□□ -1.05
ZEB1-225ENST00000606671 GCGRP47871 477 aa8.5□□□□□ -1.05
ZEB1-225ENST00000606671 ANKK1Q8NFD2 765 aa8.5□□□□□ -1.05
ZEB1-225ENST00000606671 RSPH6AQ9H0K4 717 aa8.5□□□□□ -1.05
ZEB1-225ENST00000606671 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.5□□□□□ -1.05
ZEB1-225ENST00000606671 PCDH10Q9P2E7 1040 aa8.5□□□□□ -1.05
ZEB1-225ENST00000606671 SOWAHBA6NEL2 793 aa8.49□□□□□ -1.05
ZEB1-225ENST00000606671 SLC4A3P48751 1232 aa8.49□□□□□ -1.05
ZEB1-225ENST00000606671 BCAMP50895 628 aa8.49□□□□□ -1.05
ZEB1-225ENST00000606671 SKIV2LQ15477 1246 aaKnown RBP8.49□□□□□ -1.05
ZEB1-225ENST00000606671 RSPH4AQ5TD94 716 aa8.49□□□□□ -1.05
ZEB1-225ENST00000606671 NUTM1Q86Y26 1132 aa8.49□□□□□ -1.05
ZEB1-225ENST00000606671 WNT2BQ93097 391 aa8.49□□□□□ -1.05
ZEB1-225ENST00000606671 POLR3EQ9NVU0 708 aa8.49□□□□□ -1.05
ZEB1-225ENST00000606671 KDM4AO75164 1064 aa8.48□□□□□ -1.05
ZEB1-225ENST00000606671 CFHP08603 1231 aa8.48□□□□□ -1.05
ZEB1-225ENST00000606671 MOXD2PA6NHM9 499 aa8.47□□□□□ -1.05
ZEB1-225ENST00000606671 DIXDC1Q155Q3 683 aa8.47□□□□□ -1.05
ZEB1-225ENST00000606671 PROCA1Q8NCQ7 364 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-225ENST00000606671 PCMTD1Q96MG8 357 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-225ENST00000606671 LIMD1Q9UGP4 676 aa8.47□□□□□ -1.05
ZEB1-225ENST00000606671 CLK2P49760 499 aaKnown RBP8.46□□□□□ -1.06
ZEB1-225ENST00000606671 HPS5Q9UPZ3 1129 aa8.46□□□□□ -1.06
ZEB1-225ENST00000606671 HOXA2O43364 376 aa8.45□□□□□ -1.06
ZEB1-225ENST00000606671 NDUFV2P19404 249 aa8.45□□□□□ -1.06
ZEB1-225ENST00000606671 FUT2Q10981 343 aa8.45□□□□□ -1.06
ZEB1-225ENST00000606671 RSBN1LQ6PCB5 846 aaPredicted RBP8.45□□□□□ -1.06
ZEB1-225ENST00000606671 RIC3Q7Z5B4 369 aa8.45□□□□□ -1.06
ZEB1-225ENST00000606671 HLA-CQ95604 372 aa8.45□□□□□ -1.06
ZEB1-225ENST00000606671 SPTLC1O15269 473 aa8.44□□□□□ -1.06
ZEB1-225ENST00000606671 USP46P62068 366 aa8.44□□□□□ -1.06
ZEB1-225ENST00000606671 KCTD12Q96CX2 325 aaKnown RBP8.44□□□□□ -1.06
ZEB1-225ENST00000606671 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
ZEB1-225ENST00000606671 PPP4CP60510 307 aa8.43□□□□□ -1.06
ZEB1-225ENST00000606671 GUCA2AQ02747 115 aa8.43□□□□□ -1.06
ZEB1-225ENST00000606671 FBXO31Q5XUX0 539 aaPredicted RBP8.43□□□□□ -1.06
ZEB1-225ENST00000606671 THSD4Q6ZMP0 1018 aa8.43□□□□□ -1.06
ZEB1-225ENST00000606671 TSR3Q9UJK0 312 aaKnown RBP8.43□□□□□ -1.06
ZEB1-225ENST00000606671 APLP1P51693 650 aa8.42□□□□□ -1.06
ZEB1-225ENST00000606671 KMT5BQ4FZB7 885 aa8.42□□□□□ -1.06
ZEB1-225ENST00000606671 WBP1LQ9NX94 342 aa8.42□□□□□ -1.06
ZEB1-225ENST00000606671 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
ZEB1-225ENST00000606671 ACTN4O43707 911 aaKnown RBP8.41□□□□□ -1.06
ZEB1-225ENST00000606671 GJA5P36382 358 aa8.41□□□□□ -1.06
ZEB1-225ENST00000606671 NECTIN2Q92692 538 aa8.41□□□□□ -1.06
ZEB1-225ENST00000606671 PCDHB15Q9Y5E8 787 aa8.41□□□□□ -1.06
ZEB1-225ENST00000606671 FDX1P10109 184 aa8.4□□□□□ -1.06
ZEB1-225ENST00000606671 ATP6V1AP38606 617 aa8.4□□□□□ -1.06
ZEB1-225ENST00000606671 QPCTQ16769 361 aa8.4□□□□□ -1.06
ZEB1-225ENST00000606671 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
ZEB1-225ENST00000606671 TUSC1Q2TAM9 212 aa8.4□□□□□ -1.06
ZEB1-225ENST00000606671 PUS10Q3MIT2 529 aaKnown RBP8.4□□□□□ -1.06
ZEB1-225ENST00000606671 PCDHGC3Q9UN70 934 aa8.4□□□□□ -1.06
ZEB1-225ENST00000606671 PRR14Q9BWN1 585 aa8.38□□□□□ -1.07
ZEB1-225ENST00000606671 MYT1LQ9UL68 1186 aa8.38□□□□□ -1.07
ZEB1-225ENST00000606671 LILRB3O75022 631 aa8.37□□□□□ -1.07
ZEB1-225ENST00000606671 GRIPAP1Q4V328 841 aa8.37□□□□□ -1.07
ZEB1-225ENST00000606671 MORN1Q5T089 497 aa8.37□□□□□ -1.07
ZEB1-225ENST00000606671 CABLES1Q8TDN4 633 aa8.37□□□□□ -1.07
ZEB1-225ENST00000606671 PPP2R2DQ66LE6 453 aa8.36□□□□□ -1.07
ZEB1-225ENST00000606671 HRCP23327 699 aa8.35□□□□□ -1.07
ZEB1-225ENST00000606671 RFC5P40937 340 aa8.35□□□□□ -1.07
ZEB1-225ENST00000606671 PTPN5P54829 565 aa8.35□□□□□ -1.07
ZEB1-225ENST00000606671 RTL5Q5HYW3 569 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-225ENST00000606671 TIMELESSQ9UNS1 1208 aa8.35□□□□□ -1.07
ZEB1-225ENST00000606671 SLC27A5Q9Y2P5 690 aa8.35□□□□□ -1.07
ZEB1-225ENST00000606671 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
ZEB1-225ENST00000606671 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
ZEB1-225ENST00000606671 SPNS2Q8IVW8 549 aa8.34□□□□□ -1.07
ZEB1-225ENST00000606671 SYMPKQ92797 1274 aaKnown RBP8.34□□□□□ -1.07
ZEB1-225ENST00000606671 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms